RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 SHANK2Q9UPX8 1470 aa26.84■■□□□ 1.89
MAP1LC3B-208ENST00000570189 DMRT2Q9Y5R5 561 aa26.83■■□□□ 1.89
MAP1LC3B-208ENST00000570189 TCOF1Q13428 1488 aaKnown RBP26.82■■□□□ 1.88
MAP1LC3B-208ENST00000570189 PTPRTO14522 1441 aa26.81■■□□□ 1.88
MAP1LC3B-208ENST00000570189 KIF3BO15066 747 aa26.8■■□□□ 1.88
MAP1LC3B-208ENST00000570189 NCOA1Q15788 1441 aa26.8■■□□□ 1.88
MAP1LC3B-208ENST00000570189 ZC3H13Q5T200 1668 aaKnown RBP26.79■■□□□ 1.88
MAP1LC3B-208ENST00000570189 FGD6Q6ZV73 1430 aa26.79■■□□□ 1.88
MAP1LC3B-208ENST00000570189 CEP170BQ9Y4F5 1589 aaPredicted RBP26.79■■□□□ 1.88
MAP1LC3B-208ENST00000570189 DNMT1P26358 1616 aaKnown RBP26.79■■□□□ 1.88
MAP1LC3B-208ENST00000570189 FBXO41Q8TF61 875 aa26.78■■□□□ 1.88
MAP1LC3B-208ENST00000570189 PZPP20742 1482 aa26.78■■□□□ 1.88
MAP1LC3B-208ENST00000570189 DUOX2Q9NRD8 1548 aa26.77■■□□□ 1.88
MAP1LC3B-208ENST00000570189 CAMSAP1Q5T5Y3 1602 aa26.76■■□□□ 1.87
MAP1LC3B-208ENST00000570189 PLA2R1Q13018 1463 aa26.75■■□□□ 1.87
MAP1LC3B-208ENST00000570189 ABCC5O15440 1437 aa26.74■■□□□ 1.87
MAP1LC3B-208ENST00000570189 MROH1Q8NDA8 1641 aa26.74■■□□□ 1.87
MAP1LC3B-208ENST00000570189 A2ML1A8K2U0 1454 aa26.71■■□□□ 1.87
MAP1LC3B-208ENST00000570189 DAPK1P53355 1430 aa26.71■■□□□ 1.87
MAP1LC3B-208ENST00000570189 ABCC3O15438 1527 aa26.7■■□□□ 1.86
MAP1LC3B-208ENST00000570189 WASHC2CQ9Y4E1 1318 aa26.69■■□□□ 1.86
MAP1LC3B-208ENST00000570189 ERBINQ96RT1 1412 aa26.69■■□□□ 1.86
MAP1LC3B-208ENST00000570189 PRDM15P57071 1507 aaPredicted RBP26.67■■□□□ 1.86
MAP1LC3B-208ENST00000570189 KIF15Q9NS87 1388 aa26.66■■□□□ 1.86
MAP1LC3B-208ENST00000570189 DEPDC5O75140 1603 aa26.65■■□□□ 1.86
MAP1LC3B-208ENST00000570189 CERKQ8TCT0 537 aa26.65■■□□□ 1.86
MAP1LC3B-208ENST00000570189 TNRQ92752 1358 aa26.65■■□□□ 1.86
MAP1LC3B-208ENST00000570189 SPATA31D1Q6ZQQ2 1576 aa26.63■■□□□ 1.85
MAP1LC3B-208ENST00000570189 NLRP1Q9C000 1473 aa26.63■■□□□ 1.85
MAP1LC3B-208ENST00000570189 CEP152O94986 1710 aa26.62■■□□□ 1.85
MAP1LC3B-208ENST00000570189 PKD2Q13563 968 aa26.62■■□□□ 1.85
MAP1LC3B-208ENST00000570189 ADGRL2O95490 1459 aa26.61■■□□□ 1.85
MAP1LC3B-208ENST00000570189 LTBP4Q8N2S1 1624 aa26.6■■□□□ 1.85
MAP1LC3B-208ENST00000570189 POLR1AO95602 1720 aaPredicted RBP26.59■■□□□ 1.85
MAP1LC3B-208ENST00000570189 FBXO31Q5XUX0 539 aaPredicted RBP26.59■■□□□ 1.85
MAP1LC3B-208ENST00000570189 ANKRD30AQ9BXX3 1397 aa26.58■■□□□ 1.84
MAP1LC3B-208ENST00000570189 ARHGAP31Q2M1Z3 1444 aa26.57■■□□□ 1.84
MAP1LC3B-208ENST00000570189 IQSEC2Q5JU85 1478 aa26.55■■□□□ 1.84
MAP1LC3B-208ENST00000570189 ERVK-7P63135 1459 aa26.55■■□□□ 1.84
MAP1LC3B-208ENST00000570189 VWDEQ8N2E2 1590 aa26.54■■□□□ 1.84
MAP1LC3B-208ENST00000570189 RRP7BPQ9NSQ0 103 aa26.53■■□□□ 1.84
MAP1LC3B-208ENST00000570189 LMTK2Q8IWU2 1503 aa26.52■■□□□ 1.84
MAP1LC3B-208ENST00000570189 NCKAP5LQ9HCH0 1330 aa26.52■■□□□ 1.84
MAP1LC3B-208ENST00000570189 UGGT1Q9NYU2 1555 aa26.52■■□□□ 1.84
MAP1LC3B-208ENST00000570189 NEURL4Q96JN8 1562 aa26.51■■□□□ 1.83
MAP1LC3B-208ENST00000570189 CFAP65Q6ZU64 1925 aaKnown RBP26.48■■□□□ 1.83
MAP1LC3B-208ENST00000570189 THEMISQ8N1K5 641 aaPredicted RBP26.46■■□□□ 1.83
MAP1LC3B-208ENST00000570189 UBR1Q8IWV7 1749 aa26.45■■□□□ 1.83
MAP1LC3B-208ENST00000570189 MED14O60244 1454 aa26.45■■□□□ 1.82
MAP1LC3B-208ENST00000570189 KANK1Q14678 1352 aa26.45■■□□□ 1.82
MAP1LC3B-208ENST00000570189 CHIC2Q9UKJ5 165 aa26.43■■□□□ 1.82
MAP1LC3B-208ENST00000570189 KDM5AP29375 1690 aaKnown RBP26.42■■□□□ 1.82
MAP1LC3B-208ENST00000570189 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.42■■□□□ 1.822e-9■■■□□ 16.5
MAP1LC3B-208ENST00000570189 FAM50AQ14320 339 aaKnown RBP26.41■■□□□ 1.82
MAP1LC3B-208ENST00000570189 ANKRD50Q9ULJ7 1429 aa26.39■■□□□ 1.82
MAP1LC3B-208ENST00000570189 EFCAB6Q5THR3 1501 aa26.39■■□□□ 1.82
MAP1LC3B-208ENST00000570189 ANKLE2Q86XL3 938 aa26.39■■□□□ 1.82
MAP1LC3B-208ENST00000570189 ROCK1Q13464 1354 aa26.38■■□□□ 1.81
MAP1LC3B-208ENST00000570189 IQGAP1P46940 1657 aa26.37■■□□□ 1.81
MAP1LC3B-208ENST00000570189 ZNF335Q9H4Z2 1342 aaPredicted RBP26.37■■□□□ 1.81
MAP1LC3B-208ENST00000570189 SLIT1O75093 1534 aa26.35■■□□□ 1.81
MAP1LC3B-208ENST00000570189 UNC13BO14795 1591 aa26.35■■□□□ 1.81
MAP1LC3B-208ENST00000570189 ARHGAP23Q9P227 1491 aa26.35■■□□□ 1.81
MAP1LC3B-208ENST00000570189 NPHP4O75161 1426 aaPredicted RBP26.33■■□□□ 1.81
MAP1LC3B-208ENST00000570189 RPRD2Q5VT52 1461 aaKnown RBP26.33■■□□□ 1.81
MAP1LC3B-208ENST00000570189 CPS1P31327 1500 aa26.33■■□□□ 1.81
MAP1LC3B-208ENST00000570189 PIK3C2BO00750 1634 aa26.32■■□□□ 1.8
MAP1LC3B-208ENST00000570189 NOS1P29475 1434 aa26.32■■□□□ 1.8
MAP1LC3B-208ENST00000570189 TET3O43151 1660 aa26.32■■□□□ 1.8
MAP1LC3B-208ENST00000570189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.32■■□□□ 1.85e-8■□□□□ 8.4
MAP1LC3B-208ENST00000570189 SYNMO15061 1565 aa26.31■■□□□ 1.8
MAP1LC3B-208ENST00000570189 GCC2Q8IWJ2 1684 aa26.31■■□□□ 1.8
MAP1LC3B-208ENST00000570189 SCAF11Q99590 1463 aaKnown RBP26.27■■□□□ 1.8
MAP1LC3B-208ENST00000570189 IQGAP3Q86VI3 1631 aa26.24■■□□□ 1.79
MAP1LC3B-208ENST00000570189 RRBP1Q9P2E9 1410 aaKnown RBP26.23■■□□□ 1.79
MAP1LC3B-208ENST00000570189 ADGRB3O60242 1522 aa26.21■■□□□ 1.79
MAP1LC3B-208ENST00000570189 TMEM2Q9UHN6 1383 aa26.2■■□□□ 1.79
MAP1LC3B-208ENST00000570189 SLC52A1Q9NWF4 448 aa26.2■■□□□ 1.78
MAP1LC3B-208ENST00000570189 STRCP1A6NGW2 1772 aa26.2■■□□□ 1.78
MAP1LC3B-208ENST00000570189 IDI1Q13907 227 aa26.18■■□□□ 1.78
MAP1LC3B-208ENST00000570189 E9PCH4 1651 aa26.18■■□□□ 1.78
MAP1LC3B-208ENST00000570189 LTKP29376 864 aa26.16■■□□□ 1.78
MAP1LC3B-208ENST00000570189 TXNDC2Q86VQ3 553 aa26.13■■□□□ 1.77
MAP1LC3B-208ENST00000570189 EID1Q9Y6B2 187 aa26.13■■□□□ 1.77
MAP1LC3B-208ENST00000570189 MYO5BQ9ULV0 1848 aa26.11■■□□□ 1.77
MAP1LC3B-208ENST00000570189 TMEM131LA2VDJ0 1609 aa26.1■■□□□ 1.77
MAP1LC3B-208ENST00000570189 PPARGC1BQ86YN6 1023 aaKnown RBP26.1■■□□□ 1.77
MAP1LC3B-208ENST00000570189 UBAP1LF5GYI3 381 aa26.09■■□□□ 1.77
MAP1LC3B-208ENST00000570189 STAG3Q9UJ98 1225 aa26.09■■□□□ 1.77
MAP1LC3B-208ENST00000570189 LRRC7Q96NW7 1537 aa26.09■■□□□ 1.77
MAP1LC3B-208ENST00000570189 NUP155O75694 1391 aa26.06■■□□□ 1.76
MAP1LC3B-208ENST00000570189 ZFYVE9O95405 1425 aa26.05■■□□□ 1.76
MAP1LC3B-208ENST00000570189 ALKQ9UM73 1620 aa26.05■■□□□ 1.76
MAP1LC3B-208ENST00000570189 XIRP1Q702N8 1843 aaKnown RBP26.03■■□□□ 1.76
MAP1LC3B-208ENST00000570189 ITGAEP38570 1179 aa26.03■■□□□ 1.76
MAP1LC3B-208ENST00000570189 TOM1O60784 492 aa26.01■■□□□ 1.75
MAP1LC3B-208ENST00000570189 NAIPQ13075 1403 aa26.01■■□□□ 1.75
MAP1LC3B-208ENST00000570189 SPHKAPQ2M3C7 1700 aa26■■□□□ 1.75
MAP1LC3B-208ENST00000570189 NWD1Q149M9 1564 aa25.99■■□□□ 1.75
MAP1LC3B-208ENST00000570189 HFM1A2PYH4 1435 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms