RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 NISCHQ9Y2I1 1504 aa42.6■■■■■ 4.41
MAP1LC3B-208ENST00000570189 CCDC180Q9P1Z9 1646 aa38.2■■■■□ 3.71
MAP1LC3B-208ENST00000570189 ABCC9O60706 1549 aa37.56■■■■□ 3.6
MAP1LC3B-208ENST00000570189 RB1CC1Q8TDY2 1594 aa36.09■■■■□ 3.37
MAP1LC3B-208ENST00000570189 NACADO15069 1562 aa35.98■■■■□ 3.35
MAP1LC3B-208ENST00000570189 MYO15BQ96JP2 1530 aa35.71■■■■□ 3.31
MAP1LC3B-208ENST00000570189 DCAF8L2P0C7V8 631 aa35.45■■■■□ 3.27
MAP1LC3B-208ENST00000570189 ZCCHC6Q5VYS8 1495 aaKnown RBP35.41■■■■□ 3.26
MAP1LC3B-208ENST00000570189 DCAF1Q9Y4B6 1507 aa35.34■■■■□ 3.25
MAP1LC3B-208ENST00000570189 UNC13AQ9UPW8 1703 aa35.32■■■■□ 3.25
MAP1LC3B-208ENST00000570189 BICRAQ9NZM4 1560 aa35.03■■■■□ 3.2
MAP1LC3B-208ENST00000570189 PABPN1Q86U42 306 aaKnown RBP eCLIP34.93■■■■□ 3.18
MAP1LC3B-208ENST00000570189 DNAJC5BQ9UF47 199 aa34.89■■■■□ 3.18
MAP1LC3B-208ENST00000570189 SHROOM4Q9ULL8 1493 aa34.75■■■■□ 3.15
MAP1LC3B-208ENST00000570189 SCRIBQ14160 1630 aa34.61■■■■□ 3.13
MAP1LC3B-208ENST00000570189 EIF4G1Q04637 1599 aaKnown RBP34.11■■■■□ 3.05
MAP1LC3B-208ENST00000570189 CC2D2AQ9P2K1 1620 aa34.08■■■■□ 3.05
MAP1LC3B-208ENST00000570189 CECR2Q9BXF3 1484 aa33.88■■■■□ 3.01
MAP1LC3B-208ENST00000570189 NCAPD3P42695 1498 aa33.18■■■□□ 2.9
MAP1LC3B-208ENST00000570189 SMARCA4P51532 1647 aa33.17■■■□□ 2.9
MAP1LC3B-208ENST00000570189 ATAD2BQ9ULI0 1458 aa33.07■■■□□ 2.88
MAP1LC3B-208ENST00000570189 SMARCA2P51531 1590 aa33.06■■■□□ 2.88
MAP1LC3B-208ENST00000570189 BAZ1AQ9NRL2 1556 aaPredicted RBP33.06■■■□□ 2.88
MAP1LC3B-208ENST00000570189 HMGXB3Q12766 1538 aa33.01■■■□□ 2.87
MAP1LC3B-208ENST00000570189 PEG3Q9GZU2 1588 aa32.95■■■□□ 2.86
MAP1LC3B-208ENST00000570189 MROH2BQ7Z745 1585 aa32.76■■■□□ 2.84
MAP1LC3B-208ENST00000570189 BAZ1BQ9UIG0 1483 aaKnown RBP32.74■■■□□ 2.83
MAP1LC3B-208ENST00000570189 ERCC6Q03468 1493 aa32.43■■■□□ 2.78
MAP1LC3B-208ENST00000570189 CUX2O14529 1486 aa32.41■■■□□ 2.78
MAP1LC3B-208ENST00000570189 NESP48681 1621 aa32.4■■■□□ 2.78
MAP1LC3B-208ENST00000570189 LAMC3Q9Y6N6 1575 aa32.39■■■□□ 2.78
MAP1LC3B-208ENST00000570189 WIZO95785 1651 aa32.39■■■□□ 2.78
MAP1LC3B-208ENST00000570189 RSF1Q96T23 1441 aaPredicted RBP32.22■■■□□ 2.75
MAP1LC3B-208ENST00000570189 THOC2Q8NI27 1593 aaKnown RBP32.15■■■□□ 2.74
MAP1LC3B-208ENST00000570189 CADPSQ9ULU8 1353 aa32.12■■■□□ 2.73
MAP1LC3B-208ENST00000570189 PDS5BQ9NTI5 1447 aa32.11■■■□□ 2.73
MAP1LC3B-208ENST00000570189 KIF21AQ7Z4S6 1674 aa32.1■■■□□ 2.73
MAP1LC3B-208ENST00000570189 TOP2AP11388 1531 aaKnown RBP32.07■■■□□ 2.72
MAP1LC3B-208ENST00000570189 CFTRP13569 1480 aa31.88■■■□□ 2.69
MAP1LC3B-208ENST00000570189 DNAJC5Q9H3Z4 198 aa31.86■■■□□ 2.69
MAP1LC3B-208ENST00000570189 MRC2Q9UBG0 1479 aa31.82■■■□□ 2.68
MAP1LC3B-208ENST00000570189 WDR62O43379 1518 aa31.79■■■□□ 2.68
MAP1LC3B-208ENST00000570189 CEP164Q9UPV0 1460 aa31.75■■■□□ 2.67
MAP1LC3B-208ENST00000570189 FANCD2Q9BXW9 1451 aa31.73■■■□□ 2.67
MAP1LC3B-208ENST00000570189 PRDM2Q13029 1718 aa31.72■■■□□ 2.67
MAP1LC3B-208ENST00000570189 CCDC88BA6NC98 1476 aa31.63■■■□□ 2.65
MAP1LC3B-208ENST00000570189 URB2Q14146 1524 aaKnown RBP31.46■■■□□ 2.63
MAP1LC3B-208ENST00000570189 ABCC8Q09428 1581 aa31.23■■■□□ 2.59
MAP1LC3B-208ENST00000570189 TOPBP1Q92547 1522 aa31.19■■■□□ 2.58
MAP1LC3B-208ENST00000570189 DNMBPQ6XZF7 1577 aa31.16■■■□□ 2.58
MAP1LC3B-208ENST00000570189 IFT140Q96RY7 1462 aa31.14■■■□□ 2.57
MAP1LC3B-208ENST00000570189 ZNF608Q9ULD9 1512 aaPredicted RBP30.96■■■□□ 2.55
MAP1LC3B-208ENST00000570189 TARBP1Q13395 1621 aaKnown RBP30.95■■■□□ 2.55
MAP1LC3B-208ENST00000570189 POLA1P09884 1462 aaPredicted RBP30.89■■■□□ 2.54
MAP1LC3B-208ENST00000570189 EIF4G3O43432 1585 aaKnown RBP30.89■■■□□ 2.54
MAP1LC3B-208ENST00000570189 OSCARQ8IYS5 282 aa30.85■■■□□ 2.53
MAP1LC3B-208ENST00000570189 SUPT5HO00267 1087 aaKnown RBP30.81■■■□□ 2.52
MAP1LC3B-208ENST00000570189 CUX1P39880 1505 aa30.78■■■□□ 2.52
MAP1LC3B-208ENST00000570189 WDR97A6NE52 1622 aa30.78■■■□□ 2.52
MAP1LC3B-208ENST00000570189 FGD5Q6ZNL6 1462 aa30.73■■■□□ 2.51
MAP1LC3B-208ENST00000570189 AQRO60306 1485 aaKnown RBP eCLIP30.7■■■□□ 2.514e-6■■■■■ 31
MAP1LC3B-208ENST00000570189 SOGA1O94964 1423 aa30.7■■■□□ 2.5
MAP1LC3B-208ENST00000570189 RAD54L2Q9Y4B4 1467 aa30.69■■■□□ 2.5
MAP1LC3B-208ENST00000570189 CHD1O14646 1710 aa30.61■■■□□ 2.49
MAP1LC3B-208ENST00000570189 TDRD9Q8NDG6 1382 aaKnown RBP30.54■■■□□ 2.48
MAP1LC3B-208ENST00000570189 RIMBP3CA6NJZ7 1639 aa30.48■■■□□ 2.47
MAP1LC3B-208ENST00000570189 RIMBP3BA6NNM3 1639 aa30.48■■■□□ 2.47
MAP1LC3B-208ENST00000570189 RIMBP3Q9UFD9 1639 aa30.48■■■□□ 2.47
MAP1LC3B-208ENST00000570189 MAGI1Q96QZ7 1491 aaPredicted RBP30.48■■■□□ 2.47
MAP1LC3B-208ENST00000570189 ABCA10Q8WWZ4 1543 aa30.47■■■□□ 2.47
MAP1LC3B-208ENST00000570189 BIVM-ERCC5R4GMW8 1640 aa30.47■■■□□ 2.47
MAP1LC3B-208ENST00000570189 GRIN2BQ13224 1484 aa30.46■■■□□ 2.47
MAP1LC3B-208ENST00000570189 TOP2BQ02880 1626 aa30.45■■■□□ 2.47
MAP1LC3B-208ENST00000570189 SNAPC4Q5SXM2 1469 aa30.44■■■□□ 2.46
MAP1LC3B-208ENST00000570189 ABCA5Q8WWZ7 1642 aa30.42■■■□□ 2.46
MAP1LC3B-208ENST00000570189 PBRM1Q86U86 1689 aa30.42■■■□□ 2.46
MAP1LC3B-208ENST00000570189 ARHGEF11O15085 1522 aa30.42■■■□□ 2.46
MAP1LC3B-208ENST00000570189 TRIM41Q8WV44 630 aa30.41■■■□□ 2.46
MAP1LC3B-208ENST00000570189 GAPVD1Q14C86 1478 aa30.38■■■□□ 2.45
MAP1LC3B-208ENST00000570189 WRNQ14191 1432 aaPredicted RBP eCLIP30.38■■■□□ 2.45
MAP1LC3B-208ENST00000570189 SYNJ1O43426 1573 aa30.35■■■□□ 2.45
MAP1LC3B-208ENST00000570189 SYNJ2O15056 1496 aa30.34■■■□□ 2.45
MAP1LC3B-208ENST00000570189 CLASP1Q7Z460 1538 aa30.29■■■□□ 2.44
MAP1LC3B-208ENST00000570189 FBLN2P98095 1184 aa30.29■■■□□ 2.44
MAP1LC3B-208ENST00000570189 CHMP7Q8WUX9 453 aaPredicted RBP30.23■■■□□ 2.43
MAP1LC3B-208ENST00000570189 ADAMTS12P58397 1594 aa30.14■■■□□ 2.42
MAP1LC3B-208ENST00000570189 ARAP1Q96P48 1450 aa30.12■■■□□ 2.41
MAP1LC3B-208ENST00000570189 ERICH3Q5RHP9 1530 aa30.12■■■□□ 2.41
MAP1LC3B-208ENST00000570189 GRIN2AQ12879 1464 aa30.06■■■□□ 2.4
MAP1LC3B-208ENST00000570189 FHAD1B1AJZ9 1412 aa30.03■■■□□ 2.4
MAP1LC3B-208ENST00000570189 NUP160Q12769 1436 aa30■■■□□ 2.39
MAP1LC3B-208ENST00000570189 CYB5RLQ6IPT4 315 aa30■■■□□ 2.39
MAP1LC3B-208ENST00000570189 CEP170Q5SW79 1584 aa29.94■■■□□ 2.38
MAP1LC3B-208ENST00000570189 SHROOM2Q13796 1616 aa29.88■■■□□ 2.37
MAP1LC3B-208ENST00000570189 KIF27Q86VH2 1401 aa29.79■■■□□ 2.36
MAP1LC3B-208ENST00000570189 CUL7Q14999 1698 aa29.77■■■□□ 2.36
MAP1LC3B-208ENST00000570189 ERCC6L2Q5T890 1561 aa29.73■■■□□ 2.35
MAP1LC3B-208ENST00000570189 IGF1RP08069 1367 aa29.72■■■□□ 2.35
MAP1LC3B-208ENST00000570189 RUSC2Q8N2Y8 1516 aa29.71■■■□□ 2.35
MAP1LC3B-208ENST00000570189 KIAA0586Q9BVV6 1533 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms