RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 MIA2Q96PC5 1412 aa21.95■■□□□ 1.1
GTF3C1-211ENST00000569653 MROH1Q8NDA8 1641 aa21.95■■□□□ 1.1
GTF3C1-211ENST00000569653 DMRT2Q9Y5R5 561 aa21.94■■□□□ 1.1
GTF3C1-211ENST00000569653 CROCC2H7BZ55 1655 aa21.94■■□□□ 1.1
GTF3C1-211ENST00000569653 DNMT1P26358 1616 aaKnown RBP21.93■■□□□ 1.1
GTF3C1-211ENST00000569653 FAM135AQ9P2D6 1515 aa21.93■■□□□ 1.1
GTF3C1-211ENST00000569653 PZPP20742 1482 aa21.92■■□□□ 1.1
GTF3C1-211ENST00000569653 TCOF1Q13428 1488 aaKnown RBP21.92■■□□□ 1.1
GTF3C1-211ENST00000569653 FBXO31Q5XUX0 539 aaPredicted RBP21.92■■□□□ 1.1
GTF3C1-211ENST00000569653 PLA2R1Q13018 1463 aa21.91■■□□□ 1.1
GTF3C1-211ENST00000569653 NCKAP5LQ9HCH0 1330 aa21.91■■□□□ 1.1
GTF3C1-211ENST00000569653 PTPN23Q9H3S7 1636 aa21.91■■□□□ 1.1
GTF3C1-211ENST00000569653 A2ML1A8K2U0 1454 aa21.9■■□□□ 1.1
GTF3C1-211ENST00000569653 EIF2AK4Q9P2K8 1649 aaKnown RBP21.9■■□□□ 1.1
GTF3C1-211ENST00000569653 TSPY4P0CV99 314 aa21.89■■□□□ 1.09
GTF3C1-211ENST00000569653 TSPY10P0CW01 314 aa21.89■■□□□ 1.09
GTF3C1-211ENST00000569653 ABCC3O15438 1527 aa21.88■■□□□ 1.09
GTF3C1-211ENST00000569653 CEP152O94986 1710 aa21.87■■□□□ 1.09
GTF3C1-211ENST00000569653 ABCC5O15440 1437 aa21.87■■□□□ 1.09
GTF3C1-211ENST00000569653 TNRQ92752 1358 aa21.87■■□□□ 1.09
GTF3C1-211ENST00000569653 NEURL4Q96JN8 1562 aa21.86■■□□□ 1.09
GTF3C1-211ENST00000569653 ZC3H13Q5T200 1668 aaKnown RBP21.85■■□□□ 1.09
GTF3C1-211ENST00000569653 WASHC2CQ9Y4E1 1318 aa21.84■■□□□ 1.09
GTF3C1-211ENST00000569653 POLR1AO95602 1720 aaPredicted RBP21.84■■□□□ 1.09
GTF3C1-211ENST00000569653 SHANK2Q9UPX8 1470 aa21.83■■□□□ 1.09
GTF3C1-211ENST00000569653 FGD6Q6ZV73 1430 aa21.82■■□□□ 1.08
GTF3C1-211ENST00000569653 DUOX2Q9NRD8 1548 aa21.82■■□□□ 1.08
GTF3C1-211ENST00000569653 CFAP65Q6ZU64 1925 aaKnown RBP21.82■■□□□ 1.08
GTF3C1-211ENST00000569653 ZNF335Q9H4Z2 1342 aaPredicted RBP21.81■■□□□ 1.08
GTF3C1-211ENST00000569653 SPATA31D1Q6ZQQ2 1576 aa21.8■■□□□ 1.08
GTF3C1-211ENST00000569653 DAPK1P53355 1430 aa21.8■■□□□ 1.08
GTF3C1-211ENST00000569653 KIF15Q9NS87 1388 aa21.78■■□□□ 1.08
GTF3C1-211ENST00000569653 PKD2Q13563 968 aa21.78■■□□□ 1.08
GTF3C1-211ENST00000569653 DEPDC5O75140 1603 aa21.77■■□□□ 1.08
GTF3C1-211ENST00000569653 PRDM15P57071 1507 aaPredicted RBP21.77■■□□□ 1.08
GTF3C1-211ENST00000569653 ERVK-7P63135 1459 aa21.77■■□□□ 1.07
GTF3C1-211ENST00000569653 IQSEC2Q5JU85 1478 aa21.76■■□□□ 1.07
GTF3C1-211ENST00000569653 NLRP1Q9C000 1473 aa21.75■■□□□ 1.07
GTF3C1-211ENST00000569653 UGGT1Q9NYU2 1555 aa21.74■■□□□ 1.07
GTF3C1-211ENST00000569653 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.74■■□□□ 1.07
GTF3C1-211ENST00000569653 APLP2Q06481 763 aa21.73■■□□□ 1.07
GTF3C1-211ENST00000569653 ERBINQ96RT1 1412 aa21.72■■□□□ 1.07
GTF3C1-211ENST00000569653 RRP7BPQ9NSQ0 103 aa21.72■■□□□ 1.07
GTF3C1-211ENST00000569653 UBR1Q8IWV7 1749 aa21.71■■□□□ 1.07
GTF3C1-211ENST00000569653 VWDEQ8N2E2 1590 aa21.69■■□□□ 1.06
GTF3C1-211ENST00000569653 CHIC2Q9UKJ5 165 aa21.67■■□□□ 1.06
GTF3C1-211ENST00000569653 MED14O60244 1454 aa21.66■■□□□ 1.06
GTF3C1-211ENST00000569653 ARHGAP31Q2M1Z3 1444 aa21.66■■□□□ 1.06
GTF3C1-211ENST00000569653 STRCP1A6NGW2 1772 aa21.66■■□□□ 1.06
GTF3C1-211ENST00000569653 IQGAP1P46940 1657 aa21.66■■□□□ 1.06
GTF3C1-211ENST00000569653 ADGRL2O95490 1459 aa21.65■■□□□ 1.06
GTF3C1-211ENST00000569653 NPHP4O75161 1426 aaPredicted RBP21.63■■□□□ 1.05
GTF3C1-211ENST00000569653 ANKRD30AQ9BXX3 1397 aa21.62■■□□□ 1.05
GTF3C1-211ENST00000569653 LMTK2Q8IWU2 1503 aa21.62■■□□□ 1.05
GTF3C1-211ENST00000569653 THEMISQ8N1K5 641 aaPredicted RBP21.62■■□□□ 1.05
GTF3C1-211ENST00000569653 PIK3C2BO00750 1634 aa21.62■■□□□ 1.05
GTF3C1-211ENST00000569653 ANKLE2Q86XL3 938 aa21.61■■□□□ 1.05
GTF3C1-211ENST00000569653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.61■■□□□ 1.054e-9■■■□□ 16.7
GTF3C1-211ENST00000569653 SYNMO15061 1565 aa21.6■■□□□ 1.05
GTF3C1-211ENST00000569653 ARHGAP23Q9P227 1491 aa21.58■■□□□ 1.05
GTF3C1-211ENST00000569653 CPS1P31327 1500 aa21.58■■□□□ 1.04
GTF3C1-211ENST00000569653 EFCAB6Q5THR3 1501 aa21.58■■□□□ 1.04
GTF3C1-211ENST00000569653 ALKQ9UM73 1620 aa21.58■■□□□ 1.04
GTF3C1-211ENST00000569653 SLIT1O75093 1534 aa21.57■■□□□ 1.04
GTF3C1-211ENST00000569653 UBAP1LF5GYI3 381 aa21.56■■□□□ 1.04
GTF3C1-211ENST00000569653 FAM50AQ14320 339 aaKnown RBP21.56■■□□□ 1.04
GTF3C1-211ENST00000569653 SCAF11Q99590 1463 aaKnown RBP21.54■■□□□ 1.04
GTF3C1-211ENST00000569653 LTKP29376 864 aa21.53■■□□□ 1.04
GTF3C1-211ENST00000569653 KANK1Q14678 1352 aa21.52■■□□□ 1.04
GTF3C1-211ENST00000569653 KDM5AP29375 1690 aaKnown RBP21.52■■□□□ 1.04
GTF3C1-211ENST00000569653 NOS1P29475 1434 aa21.52■■□□□ 1.04
GTF3C1-211ENST00000569653 ANKRD50Q9ULJ7 1429 aa21.52■■□□□ 1.04
GTF3C1-211ENST00000569653 UNC13BO14795 1591 aa21.49■■□□□ 1.03
GTF3C1-211ENST00000569653 MYO5BQ9ULV0 1848 aa21.49■■□□□ 1.03
GTF3C1-211ENST00000569653 XIRP1Q702N8 1843 aaKnown RBP21.48■■□□□ 1.03
GTF3C1-211ENST00000569653 TET3O43151 1660 aa21.48■■□□□ 1.03
GTF3C1-211ENST00000569653 LRRC7Q96NW7 1537 aa21.48■■□□□ 1.03
GTF3C1-211ENST00000569653 IDI1Q13907 227 aa21.47■■□□□ 1.03
GTF3C1-211ENST00000569653 PPARGC1BQ86YN6 1023 aaKnown RBP21.46■■□□□ 1.03
GTF3C1-211ENST00000569653 DISP3Q9P2K9 1392 aa21.46■■□□□ 1.03
GTF3C1-211ENST00000569653 TMEM2Q9UHN6 1383 aa21.46■■□□□ 1.03
GTF3C1-211ENST00000569653 ADGRB3O60242 1522 aa21.45■■□□□ 1.02
GTF3C1-211ENST00000569653 GCC2Q8IWJ2 1684 aa21.45■■□□□ 1.02
GTF3C1-211ENST00000569653 ILDR2Q71H61 639 aa21.44■■□□□ 1.02
GTF3C1-211ENST00000569653 TXNDC2Q86VQ3 553 aa21.44■■□□□ 1.02
GTF3C1-211ENST00000569653 E9PCH4 1651 aa21.43■■□□□ 1.02
GTF3C1-211ENST00000569653 RPRD2Q5VT52 1461 aaKnown RBP21.41■■□□□ 1.02
GTF3C1-211ENST00000569653 ROCK1Q13464 1354 aa21.4■■□□□ 1.02
GTF3C1-211ENST00000569653 IQGAP3Q86VI3 1631 aa21.4■■□□□ 1.02
GTF3C1-211ENST00000569653 HSPA1LP34931 641 aa21.39■■□□□ 1.01
GTF3C1-211ENST00000569653 PIP4K2BP78356 416 aa21.39■■□□□ 1.01
GTF3C1-211ENST00000569653 TMEM131LA2VDJ0 1609 aa21.38■■□□□ 1.01
GTF3C1-211ENST00000569653 SCAF1Q9H7N4 1312 aaKnown RBP21.35■■□□□ 1.01
GTF3C1-211ENST00000569653 TOM1O60784 492 aa21.35■■□□□ 1.01
GTF3C1-211ENST00000569653 ZFYVE9O95405 1425 aa21.35■■□□□ 1.01
GTF3C1-211ENST00000569653 STAG3Q9UJ98 1225 aa21.34■■□□□ 1.01
GTF3C1-211ENST00000569653 EID1Q9Y6B2 187 aa21.34■■□□□ 1.01
GTF3C1-211ENST00000569653 ITGAEP38570 1179 aa21.33■■□□□ 1.01
GTF3C1-211ENST00000569653 SLC52A1Q9NWF4 448 aa21.32■■□□□ 1
GTF3C1-211ENST00000569653 NWD1Q149M9 1564 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms