RNA–Protein interactions for RNA: ENST00000568796.1

PKD1-236, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 447 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-236ENST00000568796 FBXO31Q5XUX0 539 aaPredicted RBP24.53■■□□□ 1.52
PKD1-236ENST00000568796 CAMSAP2Q08AD1 1489 aa24.52■■□□□ 1.52
PKD1-236ENST00000568796 WASHC2CQ9Y4E1 1318 aa24.52■■□□□ 1.52
PKD1-236ENST00000568796 SPATA31D1Q6ZQQ2 1576 aa24.51■■□□□ 1.51
PKD1-236ENST00000568796 TNRQ92752 1358 aa24.51■■□□□ 1.51
PKD1-236ENST00000568796 TSPY4P0CV99 314 aa24.49■■□□□ 1.51
PKD1-236ENST00000568796 TSPY10P0CW01 314 aa24.49■■□□□ 1.51
PKD1-236ENST00000568796 SOCS7O14512 581 aa24.48■■□□□ 1.51
PKD1-236ENST00000568796 DNMT1P26358 1616 aaKnown RBP24.48■■□□□ 1.51
PKD1-236ENST00000568796 KDM5DQ9BY66 1539 aa24.46■■□□□ 1.51
PKD1-236ENST00000568796 PZPP20742 1482 aa24.45■■□□□ 1.5
PKD1-236ENST00000568796 SCAF1Q9H7N4 1312 aaKnown RBP24.43■■□□□ 1.5
PKD1-236ENST00000568796 ANKLE2Q86XL3 938 aa24.41■■□□□ 1.5
PKD1-236ENST00000568796 THEMISQ8N1K5 641 aaPredicted RBP24.4■■□□□ 1.5
PKD1-236ENST00000568796 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.4■■□□□ 1.5
PKD1-236ENST00000568796 FAM135AQ9P2D6 1515 aa24.4■■□□□ 1.5
PKD1-236ENST00000568796 ARHGEF5Q12774 1597 aa24.39■■□□□ 1.5
PKD1-236ENST00000568796 MIA2Q96PC5 1412 aa24.39■■□□□ 1.5
PKD1-236ENST00000568796 PIP4K2BP78356 416 aa24.38■■□□□ 1.49
PKD1-236ENST00000568796 LOC105371045A0A1W2PR82 267 aa24.37■■□□□ 1.49
PKD1-236ENST00000568796 POLR1AO95602 1720 aaPredicted RBP24.36■■□□□ 1.49
PKD1-236ENST00000568796 LRRC9Q6ZRR7 1453 aa24.36■■□□□ 1.49
PKD1-236ENST00000568796 VPS8Q8N3P4 1428 aa24.35■■□□□ 1.49
PKD1-236ENST00000568796 NEURL4Q96JN8 1562 aa24.35■■□□□ 1.49
PKD1-236ENST00000568796 NLRP1Q9C000 1473 aa24.35■■□□□ 1.49
PKD1-236ENST00000568796 SHANK2Q9UPX8 1470 aa24.34■■□□□ 1.49
PKD1-236ENST00000568796 TOM1O60784 492 aa24.34■■□□□ 1.49
PKD1-236ENST00000568796 UGGT1Q9NYU2 1555 aa24.33■■□□□ 1.49
PKD1-236ENST00000568796 CPS1P31327 1500 aa24.32■■□□□ 1.48
PKD1-236ENST00000568796 KANK4Q5T7N3 995 aaPredicted RBP24.31■■□□□ 1.48
PKD1-236ENST00000568796 NPHP4O75161 1426 aaPredicted RBP24.3■■□□□ 1.48
PKD1-236ENST00000568796 HSPA1LP34931 641 aa24.3■■□□□ 1.48
PKD1-236ENST00000568796 ABCC3O15438 1527 aa24.27■■□□□ 1.48
PKD1-236ENST00000568796 MAST1Q9Y2H9 1570 aa24.26■■□□□ 1.47
PKD1-236ENST00000568796 RNF17Q9BXT8 1623 aaKnown RBP24.26■■□□□ 1.47
PKD1-236ENST00000568796 MYOM3Q5VTT5 1437 aa24.25■■□□□ 1.47
PKD1-236ENST00000568796 VWDEQ8N2E2 1590 aa24.24■■□□□ 1.47
PKD1-236ENST00000568796 MED14O60244 1454 aa24.23■■□□□ 1.47
PKD1-236ENST00000568796 ZC3H13Q5T200 1668 aaKnown RBP24.22■■□□□ 1.47
PKD1-236ENST00000568796 DEPDC5O75140 1603 aa24.22■■□□□ 1.47
PKD1-236ENST00000568796 ERVK-7P63135 1459 aa24.22■■□□□ 1.47
PKD1-236ENST00000568796 EIF2AK4Q9P2K8 1649 aaKnown RBP24.21■■□□□ 1.47
PKD1-236ENST00000568796 MAP3K1Q13233 1512 aa24.2■■□□□ 1.46
PKD1-236ENST00000568796 CFAP65Q6ZU64 1925 aaKnown RBP24.2■■□□□ 1.46
PKD1-236ENST00000568796 IQGAP1P46940 1657 aa24.19■■□□□ 1.46
PKD1-236ENST00000568796 APLP2Q06481 763 aa24.18■■□□□ 1.46
PKD1-236ENST00000568796 SENP3Q9H4L4 574 aaPredicted RBP24.18■■□□□ 1.46
PKD1-236ENST00000568796 RRP7BPQ9NSQ0 103 aa24.18■■□□□ 1.46
PKD1-236ENST00000568796 DUOX2Q9NRD8 1548 aa24.18■■□□□ 1.46
PKD1-236ENST00000568796 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.17■■□□□ 1.465e-7■□□□□ 9.7
PKD1-236ENST00000568796 CEP152O94986 1710 aa24.17■■□□□ 1.46
PKD1-236ENST00000568796 MROH1Q8NDA8 1641 aa24.17■■□□□ 1.46
PKD1-236ENST00000568796 KIF15Q9NS87 1388 aa24.16■■□□□ 1.46
PKD1-236ENST00000568796 TXNDC2Q86VQ3 553 aa24.13■■□□□ 1.45
PKD1-236ENST00000568796 MED1Q15648 1581 aaPredicted RBP24.12■■□□□ 1.45
PKD1-236ENST00000568796 ABCC5O15440 1437 aa24.11■■□□□ 1.45
PKD1-236ENST00000568796 PHF23Q9BUL5 403 aaPredicted RBP24.11■■□□□ 1.45
PKD1-236ENST00000568796 SCAF11Q99590 1463 aaKnown RBP24.11■■□□□ 1.45
PKD1-236ENST00000568796 LRRC7Q96NW7 1537 aa24.1■■□□□ 1.45
PKD1-236ENST00000568796 LTKP29376 864 aa24.1■■□□□ 1.45
PKD1-236ENST00000568796 STAG3Q9UJ98 1225 aa24.1■■□□□ 1.45
PKD1-236ENST00000568796 UBR1Q8IWV7 1749 aa24.1■■□□□ 1.45
PKD1-236ENST00000568796 EID1Q9Y6B2 187 aa24.09■■□□□ 1.45
PKD1-236ENST00000568796 ERBINQ96RT1 1412 aa24.09■■□□□ 1.45
PKD1-236ENST00000568796 STRCP1A6NGW2 1772 aa24.08■■□□□ 1.45
PKD1-236ENST00000568796 KANK1Q14678 1352 aa24.08■■□□□ 1.45
PKD1-236ENST00000568796 PTPN23Q9H3S7 1636 aa24.07■■□□□ 1.44
PKD1-236ENST00000568796 ALKQ9UM73 1620 aa24.07■■□□□ 1.44
PKD1-236ENST00000568796 CHIC2Q9UKJ5 165 aa24.07■■□□□ 1.44
PKD1-236ENST00000568796 ARHGAP31Q2M1Z3 1444 aa24.07■■□□□ 1.44
PKD1-236ENST00000568796 PRDM15P57071 1507 aaPredicted RBP24.06■■□□□ 1.44
PKD1-236ENST00000568796 DAPK1P53355 1430 aa24.05■■□□□ 1.44
PKD1-236ENST00000568796 SYNMO15061 1565 aa24.03■■□□□ 1.44
PKD1-236ENST00000568796 CROCC2H7BZ55 1655 aa24.03■■□□□ 1.44
PKD1-236ENST00000568796 ARHGAP23Q9P227 1491 aa24.03■■□□□ 1.44
PKD1-236ENST00000568796 SLIT1O75093 1534 aa24.02■■□□□ 1.44
PKD1-236ENST00000568796 ANKRD30AQ9BXX3 1397 aa24.01■■□□□ 1.43
PKD1-236ENST00000568796 FGD6Q6ZV73 1430 aa24.01■■□□□ 1.43
PKD1-236ENST00000568796 TMEM2Q9UHN6 1383 aa23.99■■□□□ 1.43
PKD1-236ENST00000568796 PIK3C2BO00750 1634 aa23.98■■□□□ 1.43
PKD1-236ENST00000568796 IDI1Q13907 227 aa23.97■■□□□ 1.43
PKD1-236ENST00000568796 EFCAB6Q5THR3 1501 aa23.93■■□□□ 1.42
PKD1-236ENST00000568796 FAM50AQ14320 339 aaKnown RBP23.92■■□□□ 1.42
PKD1-236ENST00000568796 BCANQ96GW7 911 aa23.92■■□□□ 1.42
PKD1-236ENST00000568796 SLC26A8Q96RN1 970 aa23.92■■□□□ 1.42
PKD1-236ENST00000568796 LMTK2Q8IWU2 1503 aa23.9■■□□□ 1.42
PKD1-236ENST00000568796 KCNA6P17658 529 aa23.89■■□□□ 1.41
PKD1-236ENST00000568796 PROSER2Q86WR7 435 aaPredicted RBP23.89■■□□□ 1.41
PKD1-236ENST00000568796 TMEM94Q12767 1356 aa23.89■■□□□ 1.41
PKD1-236ENST00000568796 RBM33Q96EV2 1170 aaKnown RBP23.88■■□□□ 1.41
PKD1-236ENST00000568796 XIRP1Q702N8 1843 aaKnown RBP23.87■■□□□ 1.41
PKD1-236ENST00000568796 NOS1P29475 1434 aa23.85■■□□□ 1.41
PKD1-236ENST00000568796 SLC52A1Q9NWF4 448 aa23.85■■□□□ 1.41
PKD1-236ENST00000568796 KDM5AP29375 1690 aaKnown RBP23.83■■□□□ 1.41
PKD1-236ENST00000568796 ADGRB3O60242 1522 aa23.83■■□□□ 1.41
PKD1-236ENST00000568796 FAM135BQ49AJ0 1406 aa23.83■■□□□ 1.4
PKD1-236ENST00000568796 ADGRL2O95490 1459 aa23.81■■□□□ 1.4
PKD1-236ENST00000568796 ANKRD50Q9ULJ7 1429 aa23.81■■□□□ 1.4
PKD1-236ENST00000568796 PPP1R15AO75807 674 aaPredicted RBP23.8■■□□□ 1.4
PKD1-236ENST00000568796 TET3O43151 1660 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms