RNA–Protein interactions for RNA: ENST00000568080.1

GSE1-213, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 5

Gene GSE1, Length 289 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-213ENST00000568080 CERKQ8TCT0 537 aa23.11■■□□□ 1.29
GSE1-213ENST00000568080 NCOA1Q15788 1441 aa23.1■■□□□ 1.29
GSE1-213ENST00000568080 FAM135AQ9P2D6 1515 aa23.1■■□□□ 1.29
GSE1-213ENST00000568080 ZNF142P52746 1687 aaPredicted RBP23.09■■□□□ 1.29
GSE1-213ENST00000568080 CEP170BQ9Y4F5 1589 aaPredicted RBP23.09■■□□□ 1.29
GSE1-213ENST00000568080 PTPRTO14522 1441 aa23.08■■□□□ 1.29
GSE1-213ENST00000568080 FGD6Q6ZV73 1430 aa23.07■■□□□ 1.28
GSE1-213ENST00000568080 EIF2AK4Q9P2K8 1649 aaKnown RBP23.06■■□□□ 1.28
GSE1-213ENST00000568080 CROCC2H7BZ55 1655 aa23.06■■□□□ 1.28
GSE1-213ENST00000568080 PZPP20742 1482 aa23.05■■□□□ 1.28
GSE1-213ENST00000568080 FBXO31Q5XUX0 539 aaPredicted RBP23.05■■□□□ 1.28
GSE1-213ENST00000568080 RNF17Q9BXT8 1623 aaKnown RBP23.04■■□□□ 1.28
GSE1-213ENST00000568080 TNRQ92752 1358 aa23.04■■□□□ 1.28
GSE1-213ENST00000568080 DUOX2Q9NRD8 1548 aa23.04■■□□□ 1.28
GSE1-213ENST00000568080 ABCC5O15440 1437 aa23.04■■□□□ 1.28
GSE1-213ENST00000568080 NCKAP5LQ9HCH0 1330 aa23.04■■□□□ 1.28
GSE1-213ENST00000568080 SHANK2Q9UPX8 1470 aa23.04■■□□□ 1.28
GSE1-213ENST00000568080 RRP7BPQ9NSQ0 103 aa23.03■■□□□ 1.28
GSE1-213ENST00000568080 KIF15Q9NS87 1388 aa23.02■■□□□ 1.28
GSE1-213ENST00000568080 DAPK1P53355 1430 aa23.02■■□□□ 1.28
GSE1-213ENST00000568080 A2ML1A8K2U0 1454 aa23.02■■□□□ 1.28
GSE1-213ENST00000568080 DNMT1P26358 1616 aaKnown RBP23.01■■□□□ 1.27
GSE1-213ENST00000568080 ZC3H13Q5T200 1668 aaKnown RBP23.01■■□□□ 1.27
GSE1-213ENST00000568080 TCOF1Q13428 1488 aaKnown RBP23.01■■□□□ 1.27
GSE1-213ENST00000568080 PLA2R1Q13018 1463 aa23■■□□□ 1.27
GSE1-213ENST00000568080 PKD2Q13563 968 aa23■■□□□ 1.27
GSE1-213ENST00000568080 ABCC3O15438 1527 aa22.98■■□□□ 1.27
GSE1-213ENST00000568080 FAM50AQ14320 339 aaKnown RBP22.98■■□□□ 1.27
GSE1-213ENST00000568080 CHIC2Q9UKJ5 165 aa22.98■■□□□ 1.27
GSE1-213ENST00000568080 ERBINQ96RT1 1412 aa22.96■■□□□ 1.27
GSE1-213ENST00000568080 CEP152O94986 1710 aa22.96■■□□□ 1.27
GSE1-213ENST00000568080 ANKRD30AQ9BXX3 1397 aa22.95■■□□□ 1.26
GSE1-213ENST00000568080 MROH1Q8NDA8 1641 aa22.94■■□□□ 1.26
GSE1-213ENST00000568080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.94■■□□□ 1.26
GSE1-213ENST00000568080 CFAP65Q6ZU64 1925 aaKnown RBP22.94■■□□□ 1.26
GSE1-213ENST00000568080 NLRP1Q9C000 1473 aa22.92■■□□□ 1.26
GSE1-213ENST00000568080 THEMISQ8N1K5 641 aaPredicted RBP22.91■■□□□ 1.26
GSE1-213ENST00000568080 POLR1AO95602 1720 aaPredicted RBP22.9■■□□□ 1.26
GSE1-213ENST00000568080 KANK1Q14678 1352 aa22.89■■□□□ 1.26
GSE1-213ENST00000568080 UGGT1Q9NYU2 1555 aa22.89■■□□□ 1.26
GSE1-213ENST00000568080 PRDM15P57071 1507 aaPredicted RBP22.89■■□□□ 1.26
GSE1-213ENST00000568080 LTBP4Q8N2S1 1624 aa22.89■■□□□ 1.25
GSE1-213ENST00000568080 SPATA31D1Q6ZQQ2 1576 aa22.88■■□□□ 1.25
GSE1-213ENST00000568080 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.88■■□□□ 1.25
GSE1-213ENST00000568080 ZNF335Q9H4Z2 1342 aaPredicted RBP22.87■■□□□ 1.25
GSE1-213ENST00000568080 ERVK-7P63135 1459 aa22.87■■□□□ 1.25
GSE1-213ENST00000568080 ANKLE2Q86XL3 938 aa22.87■■□□□ 1.25
GSE1-213ENST00000568080 DEPDC5O75140 1603 aa22.85■■□□□ 1.25
GSE1-213ENST00000568080 ADGRL2O95490 1459 aa22.82■■□□□ 1.24
GSE1-213ENST00000568080 PPARGC1BQ86YN6 1023 aaKnown RBP22.81■■□□□ 1.24
GSE1-213ENST00000568080 ARHGAP31Q2M1Z3 1444 aa22.81■■□□□ 1.24
GSE1-213ENST00000568080 NEURL4Q96JN8 1562 aa22.8■■□□□ 1.24
GSE1-213ENST00000568080 IQSEC2Q5JU85 1478 aa22.8■■□□□ 1.24
GSE1-213ENST00000568080 NPHP4O75161 1426 aaPredicted RBP22.76■■□□□ 1.23
GSE1-213ENST00000568080 ANKRD50Q9ULJ7 1429 aa22.76■■□□□ 1.23
GSE1-213ENST00000568080 UBR1Q8IWV7 1749 aa22.76■■□□□ 1.23
GSE1-213ENST00000568080 STAG3Q9UJ98 1225 aa22.75■■□□□ 1.23
GSE1-213ENST00000568080 LMTK2Q8IWU2 1503 aa22.74■■□□□ 1.23
GSE1-213ENST00000568080 ITGAEP38570 1179 aa22.73■■□□□ 1.23
GSE1-213ENST00000568080 IQGAP1P46940 1657 aa22.73■■□□□ 1.23
GSE1-213ENST00000568080 MED14O60244 1454 aa22.73■■□□□ 1.23
GSE1-213ENST00000568080 VWDEQ8N2E2 1590 aa22.72■■□□□ 1.23
GSE1-213ENST00000568080 UBAP1LF5GYI3 381 aa22.71■■□□□ 1.23
GSE1-213ENST00000568080 EFCAB6Q5THR3 1501 aa22.7■■□□□ 1.22
GSE1-213ENST00000568080 PIK3C2BO00750 1634 aa22.69■■□□□ 1.22
GSE1-213ENST00000568080 CPS1P31327 1500 aa22.69■■□□□ 1.22
GSE1-213ENST00000568080 TXNDC2Q86VQ3 553 aa22.68■■□□□ 1.22
GSE1-213ENST00000568080 EID1Q9Y6B2 187 aa22.68■■□□□ 1.22
GSE1-213ENST00000568080 SCAF11Q99590 1463 aaKnown RBP22.66■■□□□ 1.22
GSE1-213ENST00000568080 ROCK1Q13464 1354 aa22.66■■□□□ 1.22
GSE1-213ENST00000568080 SLIT1O75093 1534 aa22.64■■□□□ 1.21
GSE1-213ENST00000568080 IDI1Q13907 227 aa22.64■■□□□ 1.21
GSE1-213ENST00000568080 SYNMO15061 1565 aa22.63■■□□□ 1.21
GSE1-213ENST00000568080 LTKP29376 864 aa22.63■■□□□ 1.21
GSE1-213ENST00000568080 TET3O43151 1660 aa22.62■■□□□ 1.21
GSE1-213ENST00000568080 ARHGAP23Q9P227 1491 aa22.62■■□□□ 1.21
GSE1-213ENST00000568080 NOS1P29475 1434 aa22.62■■□□□ 1.21
GSE1-213ENST00000568080 UNC13BO14795 1591 aa22.62■■□□□ 1.21
GSE1-213ENST00000568080 RPRD2Q5VT52 1461 aaKnown RBP22.61■■□□□ 1.21
GSE1-213ENST00000568080 SLC52A1Q9NWF4 448 aa22.61■■□□□ 1.21
GSE1-213ENST00000568080 KDM5AP29375 1690 aaKnown RBP22.61■■□□□ 1.21
GSE1-213ENST00000568080 TMEM2Q9UHN6 1383 aa22.61■■□□□ 1.21
GSE1-213ENST00000568080 SCAF1Q9H7N4 1312 aaKnown RBP22.6■■□□□ 1.21
GSE1-213ENST00000568080 GCC2Q8IWJ2 1684 aa22.6■■□□□ 1.21
GSE1-213ENST00000568080 TOM1O60784 492 aa22.58■■□□□ 1.21
GSE1-213ENST00000568080 ADGRB3O60242 1522 aa22.57■■□□□ 1.2
GSE1-213ENST00000568080 PIP4K2BP78356 416 aa22.56■■□□□ 1.2
GSE1-213ENST00000568080 NUP155O75694 1391 aa22.55■■□□□ 1.2
GSE1-213ENST00000568080 STRCP1A6NGW2 1772 aa22.55■■□□□ 1.2
GSE1-213ENST00000568080 IQGAP3Q86VI3 1631 aa22.54■■□□□ 1.2
GSE1-213ENST00000568080 BCANQ96GW7 911 aa22.54■■□□□ 1.2
GSE1-213ENST00000568080 E9PCH4 1651 aa22.52■■□□□ 1.2
GSE1-213ENST00000568080 CHGAP10645 457 aaKnown RBP22.52■■□□□ 1.2
GSE1-213ENST00000568080 RRBP1Q9P2E9 1410 aaKnown RBP22.51■■□□□ 1.19
GSE1-213ENST00000568080 DISP3Q9P2K9 1392 aa22.5■■□□□ 1.19
GSE1-213ENST00000568080 MYO5BQ9ULV0 1848 aa22.5■■□□□ 1.19
GSE1-213ENST00000568080 LRRC7Q96NW7 1537 aa22.5■■□□□ 1.19
GSE1-213ENST00000568080 PPP1R15AO75807 674 aaPredicted RBP22.48■■□□□ 1.19
GSE1-213ENST00000568080 HDGFP51858 240 aaKnown RBP22.48■■□□□ 1.19
GSE1-213ENST00000568080 SLC26A8Q96RN1 970 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms