RNA–Protein interactions for RNA: ENST00000568080.1

GSE1-213, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 5

Gene GSE1, Length 289 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-213ENST00000568080 NISCHQ9Y2I1 1504 aa36.58■■■■□ 3.45
GSE1-213ENST00000568080 CCDC180Q9P1Z9 1646 aa32.73■■■□□ 2.83
GSE1-213ENST00000568080 ABCC9O60706 1549 aa32.5■■■□□ 2.79
GSE1-213ENST00000568080 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
GSE1-213ENST00000568080 DCAF8L2P0C7V8 631 aa30.91■■■□□ 2.54
GSE1-213ENST00000568080 NACADO15069 1562 aa30.88■■■□□ 2.53
GSE1-213ENST00000568080 MYO15BQ96JP2 1530 aa30.48■■■□□ 2.47
GSE1-213ENST00000568080 ZCCHC6Q5VYS8 1495 aaKnown RBP30.36■■■□□ 2.45
GSE1-213ENST00000568080 UNC13AQ9UPW8 1703 aa30.33■■■□□ 2.45
GSE1-213ENST00000568080 PABPN1Q86U42 306 aaKnown RBP eCLIP30.31■■■□□ 2.44
GSE1-213ENST00000568080 DCAF1Q9Y4B6 1507 aa30.21■■■□□ 2.43
GSE1-213ENST00000568080 DNAJC5BQ9UF47 199 aa30.17■■■□□ 2.42
GSE1-213ENST00000568080 BICRAQ9NZM4 1560 aa30.06■■■□□ 2.4
GSE1-213ENST00000568080 SCRIBQ14160 1630 aa29.89■■■□□ 2.37
GSE1-213ENST00000568080 SHROOM4Q9ULL8 1493 aa29.7■■■□□ 2.35
GSE1-213ENST00000568080 EIF4G1Q04637 1599 aaKnown RBP29.35■■■□□ 2.29
GSE1-213ENST00000568080 CC2D2AQ9P2K1 1620 aa29.35■■■□□ 2.29
GSE1-213ENST00000568080 CECR2Q9BXF3 1484 aa29.23■■■□□ 2.27
GSE1-213ENST00000568080 SMARCA4P51532 1647 aa28.5■■■□□ 2.15
GSE1-213ENST00000568080 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
GSE1-213ENST00000568080 ATAD2BQ9ULI0 1458 aa28.44■■■□□ 2.14
GSE1-213ENST00000568080 SMARCA2P51531 1590 aa28.41■■■□□ 2.14
GSE1-213ENST00000568080 BAZ1AQ9NRL2 1556 aaPredicted RBP28.41■■■□□ 2.14
GSE1-213ENST00000568080 HMGXB3Q12766 1538 aa28.3■■■□□ 2.12
GSE1-213ENST00000568080 BAZ1BQ9UIG0 1483 aaKnown RBP28.22■■■□□ 2.11
GSE1-213ENST00000568080 MROH2BQ7Z745 1585 aa28.19■■■□□ 2.1
GSE1-213ENST00000568080 PEG3Q9GZU2 1588 aa28.17■■■□□ 2.1
GSE1-213ENST00000568080 ERCC6Q03468 1493 aa28.09■■■□□ 2.09
GSE1-213ENST00000568080 NESP48681 1621 aa27.96■■■□□ 2.07
GSE1-213ENST00000568080 WIZO95785 1651 aa27.9■■■□□ 2.06
GSE1-213ENST00000568080 CUX2O14529 1486 aa27.87■■■□□ 2.05
GSE1-213ENST00000568080 LAMC3Q9Y6N6 1575 aa27.83■■■□□ 2.05
GSE1-213ENST00000568080 RSF1Q96T23 1441 aaPredicted RBP27.7■■■□□ 2.03
GSE1-213ENST00000568080 PDS5BQ9NTI5 1447 aa27.68■■■□□ 2.02
GSE1-213ENST00000568080 CADPSQ9ULU8 1353 aa27.65■■■□□ 2.02
GSE1-213ENST00000568080 KIF21AQ7Z4S6 1674 aa27.65■■■□□ 2.02
GSE1-213ENST00000568080 THOC2Q8NI27 1593 aaKnown RBP27.61■■■□□ 2.01
GSE1-213ENST00000568080 TOP2AP11388 1531 aaKnown RBP27.55■■■□□ 2
GSE1-213ENST00000568080 DNAJC5Q9H3Z4 198 aa27.54■■■□□ 2
GSE1-213ENST00000568080 MRC2Q9UBG0 1479 aa27.4■■□□□ 1.98
GSE1-213ENST00000568080 CEP164Q9UPV0 1460 aa27.38■■□□□ 1.97
GSE1-213ENST00000568080 CFTRP13569 1480 aa27.37■■□□□ 1.97
GSE1-213ENST00000568080 FANCD2Q9BXW9 1451 aa27.35■■□□□ 1.97
GSE1-213ENST00000568080 WDR62O43379 1518 aa27.31■■□□□ 1.96
GSE1-213ENST00000568080 CCDC88BA6NC98 1476 aa27.23■■□□□ 1.95
GSE1-213ENST00000568080 PRDM2Q13029 1718 aa27.18■■□□□ 1.94
GSE1-213ENST00000568080 URB2Q14146 1524 aaKnown RBP27.08■■□□□ 1.93
GSE1-213ENST00000568080 TOPBP1Q92547 1522 aa26.85■■□□□ 1.89
GSE1-213ENST00000568080 ABCC8Q09428 1581 aa26.84■■□□□ 1.89
GSE1-213ENST00000568080 IFT140Q96RY7 1462 aa26.8■■□□□ 1.88
GSE1-213ENST00000568080 SUPT5HO00267 1087 aaKnown RBP26.79■■□□□ 1.88
GSE1-213ENST00000568080 DNMBPQ6XZF7 1577 aa26.79■■□□□ 1.88
GSE1-213ENST00000568080 ZNF608Q9ULD9 1512 aaPredicted RBP26.71■■□□□ 1.87
GSE1-213ENST00000568080 OSCARQ8IYS5 282 aa26.69■■□□□ 1.86
GSE1-213ENST00000568080 EIF4G3O43432 1585 aaKnown RBP26.6■■□□□ 1.85
GSE1-213ENST00000568080 POLA1P09884 1462 aaPredicted RBP26.59■■□□□ 1.85
GSE1-213ENST00000568080 TARBP1Q13395 1621 aaKnown RBP26.57■■□□□ 1.84
GSE1-213ENST00000568080 TRIM41Q8WV44 630 aa26.55■■□□□ 1.84
GSE1-213ENST00000568080 AQRO60306 1485 aaKnown RBP eCLIP26.52■■□□□ 1.84
GSE1-213ENST00000568080 RAD54L2Q9Y4B4 1467 aa26.5■■□□□ 1.83
GSE1-213ENST00000568080 SOGA1O94964 1423 aa26.5■■□□□ 1.83
GSE1-213ENST00000568080 CUX1P39880 1505 aa26.48■■□□□ 1.83
GSE1-213ENST00000568080 FGD5Q6ZNL6 1462 aa26.48■■□□□ 1.83
GSE1-213ENST00000568080 TDRD9Q8NDG6 1382 aaKnown RBP26.41■■□□□ 1.82
GSE1-213ENST00000568080 FBLN2P98095 1184 aa26.39■■□□□ 1.82
GSE1-213ENST00000568080 CHD1O14646 1710 aa26.37■■□□□ 1.81
GSE1-213ENST00000568080 WDR97A6NE52 1622 aa26.34■■□□□ 1.81
GSE1-213ENST00000568080 RIMBP3CA6NJZ7 1639 aa26.28■■□□□ 1.8
GSE1-213ENST00000568080 RIMBP3BA6NNM3 1639 aa26.28■■□□□ 1.8
GSE1-213ENST00000568080 RIMBP3Q9UFD9 1639 aa26.28■■□□□ 1.8
GSE1-213ENST00000568080 SNAPC4Q5SXM2 1469 aa26.27■■□□□ 1.8
GSE1-213ENST00000568080 GRIN2BQ13224 1484 aa26.23■■□□□ 1.79
GSE1-213ENST00000568080 ARHGEF11O15085 1522 aa26.22■■□□□ 1.79
GSE1-213ENST00000568080 CHMP7Q8WUX9 453 aaPredicted RBP26.21■■□□□ 1.79
GSE1-213ENST00000568080 MAGI1Q96QZ7 1491 aaPredicted RBP26.2■■□□□ 1.78
GSE1-213ENST00000568080 GAPVD1Q14C86 1478 aa26.18■■□□□ 1.78
GSE1-213ENST00000568080 PBRM1Q86U86 1689 aa26.18■■□□□ 1.78
GSE1-213ENST00000568080 WRNQ14191 1432 aaPredicted RBP eCLIP26.17■■□□□ 1.78
GSE1-213ENST00000568080 ABCA10Q8WWZ4 1543 aa26.17■■□□□ 1.78
GSE1-213ENST00000568080 TOP2BQ02880 1626 aa26.14■■□□□ 1.77
GSE1-213ENST00000568080 BIVM-ERCC5R4GMW8 1640 aa26.14■■□□□ 1.77
GSE1-213ENST00000568080 SYNJ1O43426 1573 aa26.12■■□□□ 1.77
GSE1-213ENST00000568080 SYNJ2O15056 1496 aa26.11■■□□□ 1.77
GSE1-213ENST00000568080 ABCA5Q8WWZ7 1642 aa26.1■■□□□ 1.77
GSE1-213ENST00000568080 CYB5RLQ6IPT4 315 aa26.07■■□□□ 1.76
GSE1-213ENST00000568080 CLASP1Q7Z460 1538 aa26.02■■□□□ 1.76
GSE1-213ENST00000568080 ARAP1Q96P48 1450 aa25.97■■□□□ 1.75
GSE1-213ENST00000568080 ADAMTS12P58397 1594 aa25.9■■□□□ 1.74
GSE1-213ENST00000568080 GRIN2AQ12879 1464 aa25.89■■□□□ 1.73
GSE1-213ENST00000568080 ERICH3Q5RHP9 1530 aa25.87■■□□□ 1.73
GSE1-213ENST00000568080 FHAD1B1AJZ9 1412 aa25.85■■□□□ 1.73
GSE1-213ENST00000568080 CEP170Q5SW79 1584 aa25.78■■□□□ 1.72
GSE1-213ENST00000568080 NUP160Q12769 1436 aa25.76■■□□□ 1.71
GSE1-213ENST00000568080 TRHP20396 242 aaPredicted RBP25.74■■□□□ 1.71
GSE1-213ENST00000568080 KIF27Q86VH2 1401 aa25.67■■□□□ 1.7
GSE1-213ENST00000568080 ERCC6L2Q5T890 1561 aa25.64■■□□□ 1.69
GSE1-213ENST00000568080 SHROOM2Q13796 1616 aa25.62■■□□□ 1.69
GSE1-213ENST00000568080 IGF1RP08069 1367 aa25.57■■□□□ 1.68
GSE1-213ENST00000568080 CUL7Q14999 1698 aa25.57■■□□□ 1.68
GSE1-213ENST00000568080 JPH4Q96JJ6 628 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms