RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 MED1Q15648 1581 aaPredicted RBP18.23■□□□□ 0.51
SPG7-216ENST00000567138 SCAF1Q9H7N4 1312 aaKnown RBP18.22■□□□□ 0.51
SPG7-216ENST00000567138 TNRQ92752 1358 aa18.21■□□□□ 0.51
SPG7-216ENST00000567138 RTEL1-TNFRSF6BF6WH68 1400 aa18.21■□□□□ 0.51
SPG7-216ENST00000567138 CPS1P31327 1500 aa18.21■□□□□ 0.51
SPG7-216ENST00000567138 PZPP20742 1482 aa18.2■□□□□ 0.5
SPG7-216ENST00000567138 DHX29Q7Z478 1369 aaKnown RBP18.2■□□□□ 0.5
SPG7-216ENST00000567138 CCDC141Q6ZP82 1450 aa18.2■□□□□ 0.5
SPG7-216ENST00000567138 FAM135AQ9P2D6 1515 aa18.19■□□□□ 0.5
SPG7-216ENST00000567138 CAMSAP2Q08AD1 1489 aa18.19■□□□□ 0.5
SPG7-216ENST00000567138 CEP162Q5TB80 1403 aa18.19■□□□□ 0.5
SPG7-216ENST00000567138 FBXO31Q5XUX0 539 aaPredicted RBP18.18■□□□□ 0.5
SPG7-216ENST00000567138 VWDEQ8N2E2 1590 aa18.18■□□□□ 0.5
SPG7-216ENST00000567138 SHANK2Q9UPX8 1470 aa18.18■□□□□ 0.5
SPG7-216ENST00000567138 HSPA1LP34931 641 aa18.17■□□□□ 0.5
SPG7-216ENST00000567138 PIP4K2BP78356 416 aa18.17■□□□□ 0.5
SPG7-216ENST00000567138 KIF3BO15066 747 aa18.17■□□□□ 0.5
SPG7-216ENST00000567138 IQGAP1P46940 1657 aa18.15■□□□□ 0.5
SPG7-216ENST00000567138 DEPDC5O75140 1603 aa18.15■□□□□ 0.5
SPG7-216ENST00000567138 STRCP1A6NGW2 1772 aa18.15■□□□□ 0.5
SPG7-216ENST00000567138 UGGT1Q9NYU2 1555 aa18.14■□□□□ 0.49
SPG7-216ENST00000567138 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.14■□□□□ 0.49
SPG7-216ENST00000567138 ALKQ9UM73 1620 aa18.14■□□□□ 0.49
SPG7-216ENST00000567138 CFAP65Q6ZU64 1925 aaKnown RBP18.14■□□□□ 0.49
SPG7-216ENST00000567138 NCOA2Q15596 1464 aa18.13■□□□□ 0.49
SPG7-216ENST00000567138 TOM1O60784 492 aa18.12■□□□□ 0.49
SPG7-216ENST00000567138 RNF17Q9BXT8 1623 aaKnown RBP18.12■□□□□ 0.49
SPG7-216ENST00000567138 NLRP1Q9C000 1473 aa18.11■□□□□ 0.49
SPG7-216ENST00000567138 ARHGEF5Q12774 1597 aa18.11■□□□□ 0.49
SPG7-216ENST00000567138 ZC3H13Q5T200 1668 aaKnown RBP18.11■□□□□ 0.49
SPG7-216ENST00000567138 NPHP4O75161 1426 aaPredicted RBP18.11■□□□□ 0.49
SPG7-216ENST00000567138 CEP152O94986 1710 aa18.11■□□□□ 0.49
SPG7-216ENST00000567138 WASHC2CQ9Y4E1 1318 aa18.1■□□□□ 0.49
SPG7-216ENST00000567138 MIA2Q96PC5 1412 aa18.1■□□□□ 0.49
SPG7-216ENST00000567138 ANKLE2Q86XL3 938 aa18.09■□□□□ 0.49
SPG7-216ENST00000567138 MED14O60244 1454 aa18.09■□□□□ 0.49
SPG7-216ENST00000567138 SYNMO15061 1565 aa18.08■□□□□ 0.48
SPG7-216ENST00000567138 ABCC3O15438 1527 aa18.07■□□□□ 0.48
SPG7-216ENST00000567138 EIF2AK4Q9P2K8 1649 aaKnown RBP18.06■□□□□ 0.48
SPG7-216ENST00000567138 THEMISQ8N1K5 641 aaPredicted RBP18.05■□□□□ 0.48
SPG7-216ENST00000567138 UBR1Q8IWV7 1749 aa18.05■□□□□ 0.48
SPG7-216ENST00000567138 MAST1Q9Y2H9 1570 aa18.05■□□□□ 0.48
SPG7-216ENST00000567138 MROH1Q8NDA8 1641 aa18.04■□□□□ 0.48
SPG7-216ENST00000567138 SENP3Q9H4L4 574 aaPredicted RBP18.04■□□□□ 0.48
SPG7-216ENST00000567138 ERVK-7P63135 1459 aa18.03■□□□□ 0.48
SPG7-216ENST00000567138 LRRC7Q96NW7 1537 aa18.02■□□□□ 0.48
SPG7-216ENST00000567138 RSPH4AQ5TD94 716 aa18.02■□□□□ 0.47
SPG7-216ENST00000567138 XIRP1Q702N8 1843 aaKnown RBP18.02■□□□□ 0.47
SPG7-216ENST00000567138 TSPY4P0CV99 314 aa18■□□□□ 0.47
SPG7-216ENST00000567138 TSPY10P0CW01 314 aa18■□□□□ 0.47
SPG7-216ENST00000567138 LRRC9Q6ZRR7 1453 aa17.95■□□□□ 0.46
SPG7-216ENST00000567138 SCAF11Q99590 1463 aaKnown RBP17.95■□□□□ 0.46
SPG7-216ENST00000567138 CROCC2H7BZ55 1655 aa17.95■□□□□ 0.46
SPG7-216ENST00000567138 PIK3C2BO00750 1634 aa17.93■□□□□ 0.46
SPG7-216ENST00000567138 DUOX2Q9NRD8 1548 aa17.92■□□□□ 0.46
SPG7-216ENST00000567138 PRDM15P57071 1507 aaPredicted RBP17.92■□□□□ 0.46
SPG7-216ENST00000567138 ARHGAP23Q9P227 1491 aa17.91■□□□□ 0.46
SPG7-216ENST00000567138 SLIT1O75093 1534 aa17.91■□□□□ 0.46
SPG7-216ENST00000567138 VPS8Q8N3P4 1428 aa17.9■□□□□ 0.46
SPG7-216ENST00000567138 MYOM3Q5VTT5 1437 aa17.89■□□□□ 0.45
SPG7-216ENST00000567138 LTKP29376 864 aa17.88■□□□□ 0.45
SPG7-216ENST00000567138 KANK4Q5T7N3 995 aaPredicted RBP17.85■□□□□ 0.45
SPG7-216ENST00000567138 TXNDC2Q86VQ3 553 aa17.85■□□□□ 0.45
SPG7-216ENST00000567138 ARHGAP31Q2M1Z3 1444 aa17.85■□□□□ 0.45
SPG7-216ENST00000567138 KIF15Q9NS87 1388 aa17.84■□□□□ 0.45
SPG7-216ENST00000567138 PTPN23Q9H3S7 1636 aa17.84■□□□□ 0.45
SPG7-216ENST00000567138 KDM5AP29375 1690 aaKnown RBP17.84■□□□□ 0.45
SPG7-216ENST00000567138 ROBO1Q9Y6N7 1651 aa17.84■□□□□ 0.45
SPG7-216ENST00000567138 ERBINQ96RT1 1412 aa17.83■□□□□ 0.44
SPG7-216ENST00000567138 MAP3K1Q13233 1512 aa17.82■□□□□ 0.44
SPG7-216ENST00000567138 RGS17Q9UGC6 210 aaPredicted RBP17.82■□□□□ 0.44
SPG7-216ENST00000567138 EFCAB6Q5THR3 1501 aa17.81■□□□□ 0.44
SPG7-216ENST00000567138 EID1Q9Y6B2 187 aa17.8■□□□□ 0.44
SPG7-216ENST00000567138 ABCC5O15440 1437 aa17.8■□□□□ 0.44
SPG7-216ENST00000567138 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.79■□□□□ 0.44
SPG7-216ENST00000567138 TMEM2Q9UHN6 1383 aa17.79■□□□□ 0.44
SPG7-216ENST00000567138 MYO5BQ9ULV0 1848 aa17.79■□□□□ 0.44
SPG7-216ENST00000567138 RRP7BPQ9NSQ0 103 aa17.79■□□□□ 0.44
SPG7-216ENST00000567138 SETD1AO15047 1707 aaKnown RBP17.78■□□□□ 0.44
SPG7-216ENST00000567138 TMEM94Q12767 1356 aa17.77■□□□□ 0.44
SPG7-216ENST00000567138 FAM135BQ49AJ0 1406 aa17.77■□□□□ 0.44
SPG7-216ENST00000567138 NWD1Q149M9 1564 aa17.77■□□□□ 0.43
SPG7-216ENST00000567138 STAG3Q9UJ98 1225 aa17.77■□□□□ 0.43
SPG7-216ENST00000567138 DAPK1P53355 1430 aa17.76■□□□□ 0.43
SPG7-216ENST00000567138 ADGRB3O60242 1522 aa17.76■□□□□ 0.43
SPG7-216ENST00000567138 TET3O43151 1660 aa17.76■□□□□ 0.43
SPG7-216ENST00000567138 KANK1Q14678 1352 aa17.76■□□□□ 0.43
SPG7-216ENST00000567138 LMTK2Q8IWU2 1503 aa17.75■□□□□ 0.43
SPG7-216ENST00000567138 PHLPP1O60346 1717 aa17.75■□□□□ 0.43
SPG7-216ENST00000567138 RBM33Q96EV2 1170 aaKnown RBP17.74■□□□□ 0.43
SPG7-216ENST00000567138 LOC105371045A0A1W2PR82 267 aa17.73■□□□□ 0.43
SPG7-216ENST00000567138 GCC2Q8IWJ2 1684 aa17.72■□□□□ 0.43
SPG7-216ENST00000567138 POTEAQ6S8J7 498 aa17.72■□□□□ 0.43
SPG7-216ENST00000567138 SLC26A8Q96RN1 970 aa17.72■□□□□ 0.43
SPG7-216ENST00000567138 NKTRP30414 1462 aaKnown RBP17.71■□□□□ 0.43
SPG7-216ENST00000567138 CHD2O14647 1828 aaKnown RBP17.71■□□□□ 0.43
SPG7-216ENST00000567138 KCNA6P17658 529 aa17.71■□□□□ 0.43
SPG7-216ENST00000567138 IDI1Q13907 227 aa17.71■□□□□ 0.43
SPG7-216ENST00000567138 PROSER2Q86WR7 435 aaPredicted RBP17.7■□□□□ 0.42
SPG7-216ENST00000567138 FGD6Q6ZV73 1430 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms