RNA–Protein interactions for RNA: ENST00000566219.1

EDC3-210, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-210ENST00000566219 CPS1P31327 1500 aa25.53■■□□□ 1.68
EDC3-210ENST00000566219 TNRQ92752 1358 aa25.52■■□□□ 1.68
EDC3-210ENST00000566219 KDM5DQ9BY66 1539 aa25.52■■□□□ 1.68
EDC3-210ENST00000566219 RTEL1-TNFRSF6BF6WH68 1400 aa25.51■■□□□ 1.67
EDC3-210ENST00000566219 PZPP20742 1482 aa25.49■■□□□ 1.67
EDC3-210ENST00000566219 DHX29Q7Z478 1369 aaKnown RBP25.49■■□□□ 1.67
EDC3-210ENST00000566219 HSPA1LP34931 641 aa25.49■■□□□ 1.67
EDC3-210ENST00000566219 PIP4K2BP78356 416 aa25.49■■□□□ 1.67
EDC3-210ENST00000566219 SHANK2Q9UPX8 1470 aa25.48■■□□□ 1.67
EDC3-210ENST00000566219 FAM135AQ9P2D6 1515 aa25.47■■□□□ 1.67
EDC3-210ENST00000566219 FBXO31Q5XUX0 539 aaPredicted RBP25.46■■□□□ 1.67
EDC3-210ENST00000566219 CCDC141Q6ZP82 1450 aa25.46■■□□□ 1.67
EDC3-210ENST00000566219 VWDEQ8N2E2 1590 aa25.45■■□□□ 1.66
EDC3-210ENST00000566219 CEP162Q5TB80 1403 aa25.45■■□□□ 1.66
EDC3-210ENST00000566219 KIF3BO15066 747 aa25.44■■□□□ 1.66
EDC3-210ENST00000566219 CAMSAP2Q08AD1 1489 aa25.42■■□□□ 1.66
EDC3-210ENST00000566219 TOM1O60784 492 aa25.42■■□□□ 1.66
EDC3-210ENST00000566219 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.42■■□□□ 1.662e-11■□□□□ 9.6
EDC3-210ENST00000566219 UGGT1Q9NYU2 1555 aa25.39■■□□□ 1.66
EDC3-210ENST00000566219 DEPDC5O75140 1603 aa25.39■■□□□ 1.66
EDC3-210ENST00000566219 NLRP1Q9C000 1473 aa25.39■■□□□ 1.65
EDC3-210ENST00000566219 ALKQ9UM73 1620 aa25.38■■□□□ 1.65
EDC3-210ENST00000566219 IQGAP1P46940 1657 aa25.38■■□□□ 1.65
EDC3-210ENST00000566219 NPHP4O75161 1426 aaPredicted RBP25.37■■□□□ 1.65
EDC3-210ENST00000566219 WASHC2CQ9Y4E1 1318 aa25.37■■□□□ 1.65
EDC3-210ENST00000566219 NCOA2Q15596 1464 aa25.36■■□□□ 1.65
EDC3-210ENST00000566219 ANKLE2Q86XL3 938 aa25.36■■□□□ 1.65
EDC3-210ENST00000566219 MIA2Q96PC5 1412 aa25.36■■□□□ 1.65
EDC3-210ENST00000566219 MED14O60244 1454 aa25.34■■□□□ 1.65
EDC3-210ENST00000566219 STRCP1A6NGW2 1772 aa25.33■■□□□ 1.65
EDC3-210ENST00000566219 ARHGEF5Q12774 1597 aa25.32■■□□□ 1.64
EDC3-210ENST00000566219 THEMISQ8N1K5 641 aaPredicted RBP25.32■■□□□ 1.64
EDC3-210ENST00000566219 RNF17Q9BXT8 1623 aaKnown RBP25.31■■□□□ 1.64
EDC3-210ENST00000566219 ZC3H13Q5T200 1668 aaKnown RBP25.3■■□□□ 1.64
EDC3-210ENST00000566219 SYNMO15061 1565 aa25.3■■□□□ 1.64
EDC3-210ENST00000566219 PHF23Q9BUL5 403 aaPredicted RBP25.29■■□□□ 1.64
EDC3-210ENST00000566219 ABCC3O15438 1527 aa25.28■■□□□ 1.64
EDC3-210ENST00000566219 SENP3Q9H4L4 574 aaPredicted RBP25.26■■□□□ 1.63
EDC3-210ENST00000566219 LRRC7Q96NW7 1537 aa25.26■■□□□ 1.63
EDC3-210ENST00000566219 ERVK-7P63135 1459 aa25.24■■□□□ 1.63
EDC3-210ENST00000566219 RSPH4AQ5TD94 716 aa25.24■■□□□ 1.63
EDC3-210ENST00000566219 CEP152O94986 1710 aa25.23■■□□□ 1.63
EDC3-210ENST00000566219 EIF2AK4Q9P2K8 1649 aaKnown RBP25.23■■□□□ 1.63
EDC3-210ENST00000566219 MAST1Q9Y2H9 1570 aa25.22■■□□□ 1.63
EDC3-210ENST00000566219 UBR1Q8IWV7 1749 aa25.21■■□□□ 1.63
EDC3-210ENST00000566219 MROH1Q8NDA8 1641 aa25.21■■□□□ 1.63
EDC3-210ENST00000566219 TSPY4P0CV99 314 aa25.19■■□□□ 1.62
EDC3-210ENST00000566219 TSPY10P0CW01 314 aa25.19■■□□□ 1.62
EDC3-210ENST00000566219 CFAP65Q6ZU64 1925 aaKnown RBP25.18■■□□□ 1.62
EDC3-210ENST00000566219 SCAF11Q99590 1463 aaKnown RBP25.15■■□□□ 1.62
EDC3-210ENST00000566219 XIRP1Q702N8 1843 aaKnown RBP25.12■■□□□ 1.61
EDC3-210ENST00000566219 LRRC9Q6ZRR7 1453 aa25.1■■□□□ 1.61
EDC3-210ENST00000566219 SLIT1O75093 1534 aa25.08■■□□□ 1.61
EDC3-210ENST00000566219 ARHGAP23Q9P227 1491 aa25.08■■□□□ 1.6
EDC3-210ENST00000566219 DUOX2Q9NRD8 1548 aa25.07■■□□□ 1.6
EDC3-210ENST00000566219 PRDM15P57071 1507 aaPredicted RBP25.06■■□□□ 1.6
EDC3-210ENST00000566219 LTKP29376 864 aa25.04■■□□□ 1.6
EDC3-210ENST00000566219 PIK3C2BO00750 1634 aa25.04■■□□□ 1.6
EDC3-210ENST00000566219 CROCC2H7BZ55 1655 aa25.02■■□□□ 1.6
EDC3-210ENST00000566219 VPS8Q8N3P4 1428 aa25.02■■□□□ 1.6
EDC3-210ENST00000566219 TXNDC2Q86VQ3 553 aa25.01■■□□□ 1.59
EDC3-210ENST00000566219 MYOM3Q5VTT5 1437 aa25.01■■□□□ 1.59
EDC3-210ENST00000566219 RGS17Q9UGC6 210 aaPredicted RBP25■■□□□ 1.59
EDC3-210ENST00000566219 ARHGAP31Q2M1Z3 1444 aa24.99■■□□□ 1.59
EDC3-210ENST00000566219 KIF15Q9NS87 1388 aa24.98■■□□□ 1.59
EDC3-210ENST00000566219 ERBINQ96RT1 1412 aa24.95■■□□□ 1.59
EDC3-210ENST00000566219 EID1Q9Y6B2 187 aa24.95■■□□□ 1.58
EDC3-210ENST00000566219 KANK4Q5T7N3 995 aaPredicted RBP24.94■■□□□ 1.58
EDC3-210ENST00000566219 ROBO1Q9Y6N7 1651 aa24.94■■□□□ 1.58
EDC3-210ENST00000566219 TMEM2Q9UHN6 1383 aa24.93■■□□□ 1.58
EDC3-210ENST00000566219 MAP3K1Q13233 1512 aa24.92■■□□□ 1.58
EDC3-210ENST00000566219 EFCAB6Q5THR3 1501 aa24.92■■□□□ 1.58
EDC3-210ENST00000566219 KDM5AP29375 1690 aaKnown RBP24.92■■□□□ 1.58
EDC3-210ENST00000566219 FAM135BQ49AJ0 1406 aa24.92■■□□□ 1.58
EDC3-210ENST00000566219 TMEM94Q12767 1356 aa24.91■■□□□ 1.58
EDC3-210ENST00000566219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.9■■□□□ 1.583e-7■■□□□ 13.1
EDC3-210ENST00000566219 ABCC5O15440 1437 aa24.89■■□□□ 1.58
EDC3-210ENST00000566219 STAG3Q9UJ98 1225 aa24.89■■□□□ 1.58
EDC3-210ENST00000566219 PTPN23Q9H3S7 1636 aa24.89■■□□□ 1.57
EDC3-210ENST00000566219 RRP7BPQ9NSQ0 103 aa24.88■■□□□ 1.57
EDC3-210ENST00000566219 KANK1Q14678 1352 aa24.86■■□□□ 1.57
EDC3-210ENST00000566219 NWD1Q149M9 1564 aa24.85■■□□□ 1.57
EDC3-210ENST00000566219 POTEAQ6S8J7 498 aa24.85■■□□□ 1.57
EDC3-210ENST00000566219 SETD1AO15047 1707 aaKnown RBP24.85■■□□□ 1.57
EDC3-210ENST00000566219 ADGRB3O60242 1522 aa24.85■■□□□ 1.57
EDC3-210ENST00000566219 TET3O43151 1660 aa24.85■■□□□ 1.57
EDC3-210ENST00000566219 LMTK2Q8IWU2 1503 aa24.84■■□□□ 1.57
EDC3-210ENST00000566219 DAPK1P53355 1430 aa24.84■■□□□ 1.57
EDC3-210ENST00000566219 RBM33Q96EV2 1170 aaKnown RBP24.83■■□□□ 1.57
EDC3-210ENST00000566219 NKTRP30414 1462 aaKnown RBP24.83■■□□□ 1.56
EDC3-210ENST00000566219 SLC26A8Q96RN1 970 aa24.82■■□□□ 1.56
EDC3-210ENST00000566219 KCNA6P17658 529 aa24.81■■□□□ 1.56
EDC3-210ENST00000566219 IDI1Q13907 227 aa24.8■■□□□ 1.56
EDC3-210ENST00000566219 PROSER2Q86WR7 435 aaPredicted RBP24.8■■□□□ 1.56
EDC3-210ENST00000566219 PHLPP1O60346 1717 aa24.8■■□□□ 1.56
EDC3-210ENST00000566219 NOS1P29475 1434 aa24.77■■□□□ 1.56
EDC3-210ENST00000566219 MSH6P52701 1360 aa24.75■■□□□ 1.55
EDC3-210ENST00000566219 MYO5BQ9ULV0 1848 aa24.75■■□□□ 1.55
EDC3-210ENST00000566219 FGD6Q6ZV73 1430 aa24.74■■□□□ 1.55
EDC3-210ENST00000566219 ANKRD30AQ9BXX3 1397 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms