RNA–Protein interactions for RNA: ENST00000566219.1

EDC3-210, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-210ENST00000566219 NISCHQ9Y2I1 1504 aa40.17■■■■■ 4.02
EDC3-210ENST00000566219 ABCC9O60706 1549 aa36.73■■■■□ 3.47
EDC3-210ENST00000566219 CCDC180Q9P1Z9 1646 aa36.31■■■■□ 3.4
EDC3-210ENST00000566219 DNAJC5BQ9UF47 199 aa34.76■■■■□ 3.16
EDC3-210ENST00000566219 RB1CC1Q8TDY2 1594 aa34.75■■■■□ 3.15
EDC3-210ENST00000566219 NACADO15069 1562 aa34.37■■■■□ 3.09
EDC3-210ENST00000566219 PABPN1Q86U42 306 aaKnown RBP eCLIP34.07■■■■□ 3.04
EDC3-210ENST00000566219 UNC13AQ9UPW8 1703 aa34.05■■■■□ 3.04
EDC3-210ENST00000566219 DCAF8L2P0C7V8 631 aa34.05■■■■□ 3.04
EDC3-210ENST00000566219 BICRAQ9NZM4 1560 aa33.77■■■■□ 3
EDC3-210ENST00000566219 MYO15BQ96JP2 1530 aa33.71■■■□□ 2.99
EDC3-210ENST00000566219 ZCCHC6Q5VYS8 1495 aaKnown RBP33.24■■■□□ 2.91
EDC3-210ENST00000566219 SHROOM4Q9ULL8 1493 aa33.22■■■□□ 2.91
EDC3-210ENST00000566219 CC2D2AQ9P2K1 1620 aa33.17■■■□□ 2.9
EDC3-210ENST00000566219 DCAF1Q9Y4B6 1507 aa33.13■■■□□ 2.89
EDC3-210ENST00000566219 CECR2Q9BXF3 1484 aa33.11■■■□□ 2.89
EDC3-210ENST00000566219 SCRIBQ14160 1630 aa33.1■■■□□ 2.89
EDC3-210ENST00000566219 EIF4G1Q04637 1599 aaKnown RBP32.98■■■□□ 2.87
EDC3-210ENST00000566219 DNAJC5Q9H3Z4 198 aa32.21■■■□□ 2.75
EDC3-210ENST00000566219 CUX2O14529 1486 aa31.81■■■□□ 2.68
EDC3-210ENST00000566219 ERCC6Q03468 1493 aa31.75■■■□□ 2.67
EDC3-210ENST00000566219 NCAPD3P42695 1498 aa31.7■■■□□ 2.66
EDC3-210ENST00000566219 ATAD2BQ9ULI0 1458 aa31.58■■■□□ 2.65
EDC3-210ENST00000566219 HMGXB3Q12766 1538 aa31.49■■■□□ 2.63
EDC3-210ENST00000566219 SMARCA4P51532 1647 aa31.49■■■□□ 2.63
EDC3-210ENST00000566219 SMARCA2P51531 1590 aa31.48■■■□□ 2.63
EDC3-210ENST00000566219 NESP48681 1621 aa31.43■■■□□ 2.62
EDC3-210ENST00000566219 BAZ1BQ9UIG0 1483 aaKnown RBP31.28■■■□□ 2.6
EDC3-210ENST00000566219 THOC2Q8NI27 1593 aaKnown RBP31.26■■■□□ 2.59
EDC3-210ENST00000566219 BAZ1AQ9NRL2 1556 aaPredicted RBP31.23■■■□□ 2.59
EDC3-210ENST00000566219 PEG3Q9GZU2 1588 aa31.14■■■□□ 2.58
EDC3-210ENST00000566219 LAMC3Q9Y6N6 1575 aa31.12■■■□□ 2.57
EDC3-210ENST00000566219 KIF21AQ7Z4S6 1674 aa31.07■■■□□ 2.56
EDC3-210ENST00000566219 MROH2BQ7Z745 1585 aa30.98■■■□□ 2.55
EDC3-210ENST00000566219 PDS5BQ9NTI5 1447 aa30.9■■■□□ 2.54
EDC3-210ENST00000566219 MRC2Q9UBG0 1479 aa30.72■■■□□ 2.51
EDC3-210ENST00000566219 CADPSQ9ULU8 1353 aa30.71■■■□□ 2.51
EDC3-210ENST00000566219 TRIM41Q8WV44 630 aa30.7■■■□□ 2.51
EDC3-210ENST00000566219 WDR62O43379 1518 aa30.68■■■□□ 2.5
EDC3-210ENST00000566219 WIZO95785 1651 aa30.62■■■□□ 2.49
EDC3-210ENST00000566219 CEP164Q9UPV0 1460 aa30.52■■■□□ 2.48
EDC3-210ENST00000566219 FANCD2Q9BXW9 1451 aa30.43■■■□□ 2.46
EDC3-210ENST00000566219 CFTRP13569 1480 aa30.29■■■□□ 2.44
EDC3-210ENST00000566219 URB2Q14146 1524 aaKnown RBP30.22■■■□□ 2.43
EDC3-210ENST00000566219 OSCARQ8IYS5 282 aa30.19■■■□□ 2.42
EDC3-210ENST00000566219 TOP2AP11388 1531 aaKnown RBP30.18■■■□□ 2.42
EDC3-210ENST00000566219 RSF1Q96T23 1441 aaPredicted RBP30.13■■■□□ 2.41
EDC3-210ENST00000566219 PRDM2Q13029 1718 aa30.08■■■□□ 2.41
EDC3-210ENST00000566219 RIMBP3CA6NJZ7 1639 aa30■■■□□ 2.39
EDC3-210ENST00000566219 RIMBP3BA6NNM3 1639 aa30■■■□□ 2.39
EDC3-210ENST00000566219 RIMBP3Q9UFD9 1639 aa30■■■□□ 2.39
EDC3-210ENST00000566219 ZNF608Q9ULD9 1512 aaPredicted RBP29.92■■■□□ 2.38
EDC3-210ENST00000566219 IFT140Q96RY7 1462 aa29.89■■■□□ 2.38
EDC3-210ENST00000566219 ARHGEF11O15085 1522 aa29.83■■■□□ 2.37
EDC3-210ENST00000566219 TOPBP1Q92547 1522 aa29.81■■■□□ 2.36
EDC3-210ENST00000566219 CCDC88BA6NC98 1476 aa29.8■■■□□ 2.36
EDC3-210ENST00000566219 EIF4G3O43432 1585 aaKnown RBP29.79■■■□□ 2.36
EDC3-210ENST00000566219 DNMBPQ6XZF7 1577 aa29.68■■■□□ 2.34
EDC3-210ENST00000566219 CHD1O14646 1710 aa29.68■■■□□ 2.34
EDC3-210ENST00000566219 ABCC8Q09428 1581 aa29.64■■■□□ 2.33
EDC3-210ENST00000566219 TARBP1Q13395 1621 aaKnown RBP29.6■■■□□ 2.33
EDC3-210ENST00000566219 AQRO60306 1485 aaKnown RBP eCLIP29.56■■■□□ 2.325e-8■■■■□ 24.7
EDC3-210ENST00000566219 CYB5RLQ6IPT4 315 aa29.55■■■□□ 2.32
EDC3-210ENST00000566219 ARAP1Q96P48 1450 aa29.52■■■□□ 2.32
EDC3-210ENST00000566219 POLA1P09884 1462 aaPredicted RBP29.48■■■□□ 2.31
EDC3-210ENST00000566219 FBLN2P98095 1184 aa29.43■■■□□ 2.3
EDC3-210ENST00000566219 TRHP20396 242 aaPredicted RBP29.39■■■□□ 2.3
EDC3-210ENST00000566219 RAD54L2Q9Y4B4 1467 aa29.37■■■□□ 2.29
EDC3-210ENST00000566219 SNAPC4Q5SXM2 1469 aa29.29■■■□□ 2.28
EDC3-210ENST00000566219 TDRD9Q8NDG6 1382 aaKnown RBP29.29■■■□□ 2.28
EDC3-210ENST00000566219 SOGA1O94964 1423 aa29.28■■■□□ 2.28
EDC3-210ENST00000566219 CLASP1Q7Z460 1538 aa29.27■■■□□ 2.28
EDC3-210ENST00000566219 FGD5Q6ZNL6 1462 aa29.24■■■□□ 2.27
EDC3-210ENST00000566219 WDR97A6NE52 1622 aa29.24■■■□□ 2.27
EDC3-210ENST00000566219 SYNJ1O43426 1573 aa29.2■■■□□ 2.26
EDC3-210ENST00000566219 MAGI1Q96QZ7 1491 aaPredicted RBP29.17■■■□□ 2.26
EDC3-210ENST00000566219 CUX1P39880 1505 aa29.15■■■□□ 2.26
EDC3-210ENST00000566219 CHMP7Q8WUX9 453 aaPredicted RBP29.11■■■□□ 2.25
EDC3-210ENST00000566219 GRIN2BQ13224 1484 aa29.1■■■□□ 2.25
EDC3-210ENST00000566219 SYNJ2O15056 1496 aa29.07■■■□□ 2.24
EDC3-210ENST00000566219 PBRM1Q86U86 1689 aa29.07■■■□□ 2.24
EDC3-210ENST00000566219 GAPVD1Q14C86 1478 aa28.95■■■□□ 2.22
EDC3-210ENST00000566219 ABCA5Q8WWZ7 1642 aa28.91■■■□□ 2.22
EDC3-210ENST00000566219 AEBP2Q6ZN18 517 aaPredicted RBP28.85■■■□□ 2.21
EDC3-210ENST00000566219 ABCA10Q8WWZ4 1543 aa28.84■■■□□ 2.21
EDC3-210ENST00000566219 ERCC6L2Q5T890 1561 aa28.8■■■□□ 2.2
EDC3-210ENST00000566219 GRIN2AQ12879 1464 aa28.76■■■□□ 2.19
EDC3-210ENST00000566219 ADAMTS12P58397 1594 aa28.75■■■□□ 2.19
EDC3-210ENST00000566219 CEP170Q5SW79 1584 aa28.71■■■□□ 2.19
EDC3-210ENST00000566219 NUP160Q12769 1436 aa28.66■■■□□ 2.18
EDC3-210ENST00000566219 SHROOM2Q13796 1616 aa28.62■■■□□ 2.17
EDC3-210ENST00000566219 WRNQ14191 1432 aaPredicted RBP eCLIP28.61■■■□□ 2.17
EDC3-210ENST00000566219 BIVM-ERCC5R4GMW8 1640 aa28.58■■■□□ 2.17
EDC3-210ENST00000566219 TOP2BQ02880 1626 aa28.55■■■□□ 2.16
EDC3-210ENST00000566219 FHAD1B1AJZ9 1412 aa28.54■■■□□ 2.16
EDC3-210ENST00000566219 KIF13AQ9H1H9 1805 aa28.53■■■□□ 2.16
EDC3-210ENST00000566219 ERICH3Q5RHP9 1530 aa28.48■■■□□ 2.15
EDC3-210ENST00000566219 SUPT5HO00267 1087 aaKnown RBP28.45■■■□□ 2.14
EDC3-210ENST00000566219 PRG4Q92954 1404 aaPredicted RBP28.41■■■□□ 2.14
EDC3-210ENST00000566219 RUSC2Q8N2Y8 1516 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms