RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 ZNF644Q9H582 1327 aaPredicted RBP20.71■□□□□ 0.91
RNF40-208ENST00000565995 CEP162Q5TB80 1403 aa20.7■□□□□ 0.9
RNF40-208ENST00000565995 CPS1P31327 1500 aa20.68■□□□□ 0.9
RNF40-208ENST00000565995 PZPP20742 1482 aa20.68■□□□□ 0.9
RNF40-208ENST00000565995 KDM5DQ9BY66 1539 aa20.68■□□□□ 0.9
RNF40-208ENST00000565995 DEPDC5O75140 1603 aa20.67■□□□□ 0.9
RNF40-208ENST00000565995 RSPH4AQ5TD94 716 aa20.65■□□□□ 0.9
RNF40-208ENST00000565995 CCDC141Q6ZP82 1450 aa20.64■□□□□ 0.89
RNF40-208ENST00000565995 ARHGEF5Q12774 1597 aa20.63■□□□□ 0.89
RNF40-208ENST00000565995 SHANK2Q9UPX8 1470 aa20.63■□□□□ 0.89
RNF40-208ENST00000565995 TNRQ92752 1358 aa20.63■□□□□ 0.89
RNF40-208ENST00000565995 VWDEQ8N2E2 1590 aa20.62■□□□□ 0.89
RNF40-208ENST00000565995 MED14O60244 1454 aa20.62■□□□□ 0.89
RNF40-208ENST00000565995 FBXO31Q5XUX0 539 aaPredicted RBP20.61■□□□□ 0.89
RNF40-208ENST00000565995 CAMSAP2Q08AD1 1489 aa20.61■□□□□ 0.89
RNF40-208ENST00000565995 NLRP1Q9C000 1473 aa20.61■□□□□ 0.89
RNF40-208ENST00000565995 CFAP65Q6ZU64 1925 aaKnown RBP20.61■□□□□ 0.89
RNF40-208ENST00000565995 RNF17Q9BXT8 1623 aaKnown RBP20.6■□□□□ 0.89
RNF40-208ENST00000565995 KIF3BO15066 747 aa20.6■□□□□ 0.89
RNF40-208ENST00000565995 ZC3H13Q5T200 1668 aaKnown RBP20.6■□□□□ 0.89
RNF40-208ENST00000565995 STRCP1A6NGW2 1772 aa20.59■□□□□ 0.89
RNF40-208ENST00000565995 MIA2Q96PC5 1412 aa20.59■□□□□ 0.89
RNF40-208ENST00000565995 IQGAP1P46940 1657 aa20.58■□□□□ 0.89
RNF40-208ENST00000565995 NCOA2Q15596 1464 aa20.58■□□□□ 0.89
RNF40-208ENST00000565995 MED1Q15648 1581 aaPredicted RBP20.58■□□□□ 0.88
RNF40-208ENST00000565995 UGGT1Q9NYU2 1555 aa20.58■□□□□ 0.88
RNF40-208ENST00000565995 ALKQ9UM73 1620 aa20.57■□□□□ 0.88
RNF40-208ENST00000565995 TOM1O60784 492 aa20.57■□□□□ 0.88
RNF40-208ENST00000565995 THEMISQ8N1K5 641 aaPredicted RBP20.57■□□□□ 0.88
RNF40-208ENST00000565995 WASHC2CQ9Y4E1 1318 aa20.56■□□□□ 0.88
RNF40-208ENST00000565995 ANKLE2Q86XL3 938 aa20.56■□□□□ 0.88
RNF40-208ENST00000565995 EIF2AK4Q9P2K8 1649 aaKnown RBP20.56■□□□□ 0.88
RNF40-208ENST00000565995 MAST1Q9Y2H9 1570 aa20.55■□□□□ 0.88
RNF40-208ENST00000565995 HSPA1LP34931 641 aa20.54■□□□□ 0.88
RNF40-208ENST00000565995 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.54■□□□□ 0.88
RNF40-208ENST00000565995 NPHP4O75161 1426 aaPredicted RBP20.52■□□□□ 0.87
RNF40-208ENST00000565995 UBR1Q8IWV7 1749 aa20.51■□□□□ 0.87
RNF40-208ENST00000565995 SYNMO15061 1565 aa20.5■□□□□ 0.87
RNF40-208ENST00000565995 CEP152O94986 1710 aa20.5■□□□□ 0.87
RNF40-208ENST00000565995 ABCC3O15438 1527 aa20.49■□□□□ 0.87
RNF40-208ENST00000565995 MROH1Q8NDA8 1641 aa20.49■□□□□ 0.87
RNF40-208ENST00000565995 TSPY4P0CV99 314 aa20.48■□□□□ 0.87
RNF40-208ENST00000565995 TSPY10P0CW01 314 aa20.48■□□□□ 0.87
RNF40-208ENST00000565995 XIRP1Q702N8 1843 aaKnown RBP20.48■□□□□ 0.87
RNF40-208ENST00000565995 PIP4K2BP78356 416 aa20.47■□□□□ 0.87
RNF40-208ENST00000565995 LRRC7Q96NW7 1537 aa20.44■□□□□ 0.86
RNF40-208ENST00000565995 SCAF1Q9H7N4 1312 aaKnown RBP20.44■□□□□ 0.86
RNF40-208ENST00000565995 ERVK-7P63135 1459 aa20.43■□□□□ 0.86
RNF40-208ENST00000565995 LRRC9Q6ZRR7 1453 aa20.43■□□□□ 0.86
RNF40-208ENST00000565995 MAP3K1Q13233 1512 aa20.4■□□□□ 0.86
RNF40-208ENST00000565995 KDM5AP29375 1690 aaKnown RBP20.39■□□□□ 0.86
RNF40-208ENST00000565995 SLIT1O75093 1534 aa20.39■□□□□ 0.85
RNF40-208ENST00000565995 CROCC2H7BZ55 1655 aa20.38■□□□□ 0.85
RNF40-208ENST00000565995 DUOX2Q9NRD8 1548 aa20.38■□□□□ 0.85
RNF40-208ENST00000565995 ARHGAP23Q9P227 1491 aa20.38■□□□□ 0.85
RNF40-208ENST00000565995 ARHGAP31Q2M1Z3 1444 aa20.36■□□□□ 0.85
RNF40-208ENST00000565995 PRDM15P57071 1507 aaPredicted RBP20.36■□□□□ 0.85
RNF40-208ENST00000565995 SCAF11Q99590 1463 aaKnown RBP20.36■□□□□ 0.85
RNF40-208ENST00000565995 VPS8Q8N3P4 1428 aa20.35■□□□□ 0.85
RNF40-208ENST00000565995 MYOM3Q5VTT5 1437 aa20.33■□□□□ 0.84
RNF40-208ENST00000565995 PIK3C2BO00750 1634 aa20.32■□□□□ 0.84
RNF40-208ENST00000565995 LTKP29376 864 aa20.3■□□□□ 0.84
RNF40-208ENST00000565995 ERBINQ96RT1 1412 aa20.28■□□□□ 0.84
RNF40-208ENST00000565995 PHF23Q9BUL5 403 aaPredicted RBP20.28■□□□□ 0.84
RNF40-208ENST00000565995 KANK4Q5T7N3 995 aaPredicted RBP20.27■□□□□ 0.84
RNF40-208ENST00000565995 TXNDC2Q86VQ3 553 aa20.26■□□□□ 0.83
RNF40-208ENST00000565995 PTPN23Q9H3S7 1636 aa20.24■□□□□ 0.83
RNF40-208ENST00000565995 TET3O43151 1660 aa20.24■□□□□ 0.83
RNF40-208ENST00000565995 LMTK2Q8IWU2 1503 aa20.23■□□□□ 0.83
RNF40-208ENST00000565995 ABCC5O15440 1437 aa20.23■□□□□ 0.83
RNF40-208ENST00000565995 FAM135BQ49AJ0 1406 aa20.23■□□□□ 0.83
RNF40-208ENST00000565995 KIF15Q9NS87 1388 aa20.22■□□□□ 0.83
RNF40-208ENST00000565995 TMEM2Q9UHN6 1383 aa20.22■□□□□ 0.83
RNF40-208ENST00000565995 EID1Q9Y6B2 187 aa20.22■□□□□ 0.83
RNF40-208ENST00000565995 RGS17Q9UGC6 210 aaPredicted RBP20.21■□□□□ 0.83
RNF40-208ENST00000565995 EFCAB6Q5THR3 1501 aa20.2■□□□□ 0.82
RNF40-208ENST00000565995 MYO5BQ9ULV0 1848 aa20.2■□□□□ 0.82
RNF40-208ENST00000565995 ROBO1Q9Y6N7 1651 aa20.19■□□□□ 0.82
RNF40-208ENST00000565995 CHD2O14647 1828 aaKnown RBP20.19■□□□□ 0.82
RNF40-208ENST00000565995 DAPK1P53355 1430 aa20.17■□□□□ 0.82
RNF40-208ENST00000565995 NWD1Q149M9 1564 aa20.17■□□□□ 0.82
RNF40-208ENST00000565995 RRP7BPQ9NSQ0 103 aa20.16■□□□□ 0.82
RNF40-208ENST00000565995 KANK1Q14678 1352 aa20.16■□□□□ 0.82
RNF40-208ENST00000565995 KCNA6P17658 529 aa20.15■□□□□ 0.82
RNF40-208ENST00000565995 NOS1P29475 1434 aa20.14■□□□□ 0.81
RNF40-208ENST00000565995 IDI1Q13907 227 aa20.14■□□□□ 0.81
RNF40-208ENST00000565995 TMEM94Q12767 1356 aa20.13■□□□□ 0.81
RNF40-208ENST00000565995 SENP3Q9H4L4 574 aaPredicted RBP20.13■□□□□ 0.81
RNF40-208ENST00000565995 ADGRB3O60242 1522 aa20.12■□□□□ 0.81
RNF40-208ENST00000565995 LOC105371045A0A1W2PR82 267 aa20.12■□□□□ 0.81
RNF40-208ENST00000565995 NKTRP30414 1462 aaKnown RBP20.11■□□□□ 0.81
RNF40-208ENST00000565995 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.11■□□□□ 0.812e-9■■■□□ 16.7
RNF40-208ENST00000565995 PHLPP1O60346 1717 aa20.1■□□□□ 0.81
RNF40-208ENST00000565995 FGD6Q6ZV73 1430 aa20.1■□□□□ 0.81
RNF40-208ENST00000565995 STAG3Q9UJ98 1225 aa20.09■□□□□ 0.81
RNF40-208ENST00000565995 ANKRD30AQ9BXX3 1397 aa20.08■□□□□ 0.81
RNF40-208ENST00000565995 GCC2Q8IWJ2 1684 aa20.08■□□□□ 0.81
RNF40-208ENST00000565995 ADGRL2O95490 1459 aa20.07■□□□□ 0.8
RNF40-208ENST00000565995 RPRD2Q5VT52 1461 aaKnown RBP20.07■□□□□ 0.8
RNF40-208ENST00000565995 PROSER2Q86WR7 435 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms