RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 FAM135AQ9P2D6 1515 aa18.53■□□□□ 0.56
NSMCE1-209ENST00000565384 SPATA31D1Q6ZQQ2 1576 aa18.52■□□□□ 0.56
NSMCE1-209ENST00000565384 RSPH4AQ5TD94 716 aa18.52■□□□□ 0.56
NSMCE1-209ENST00000565384 PZPP20742 1482 aa18.52■□□□□ 0.55
NSMCE1-209ENST00000565384 TNRQ92752 1358 aa18.51■□□□□ 0.55
NSMCE1-209ENST00000565384 ARHGEF5Q12774 1597 aa18.51■□□□□ 0.55
NSMCE1-209ENST00000565384 ILDR2Q71H61 639 aa18.5■□□□□ 0.55
NSMCE1-209ENST00000565384 FBXO31Q5XUX0 539 aaPredicted RBP18.49■□□□□ 0.55
NSMCE1-209ENST00000565384 WASHC2CQ9Y4E1 1318 aa18.48■□□□□ 0.55
NSMCE1-209ENST00000565384 UBAP1LF5GYI3 381 aa18.47■□□□□ 0.55
NSMCE1-209ENST00000565384 VPS8Q8N3P4 1428 aa18.47■□□□□ 0.55
NSMCE1-209ENST00000565384 LRRC9Q6ZRR7 1453 aa18.46■□□□□ 0.55
NSMCE1-209ENST00000565384 POLR1AO95602 1720 aaPredicted RBP18.46■□□□□ 0.55
NSMCE1-209ENST00000565384 TSPY4P0CV99 314 aa18.46■□□□□ 0.55
NSMCE1-209ENST00000565384 TSPY10P0CW01 314 aa18.46■□□□□ 0.55
NSMCE1-209ENST00000565384 NEURL4Q96JN8 1562 aa18.46■□□□□ 0.55
NSMCE1-209ENST00000565384 MAST1Q9Y2H9 1570 aa18.43■□□□□ 0.54
NSMCE1-209ENST00000565384 MIA2Q96PC5 1412 aa18.42■□□□□ 0.54
NSMCE1-209ENST00000565384 NLRP1Q9C000 1473 aa18.42■□□□□ 0.54
NSMCE1-209ENST00000565384 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.42■□□□□ 0.54
NSMCE1-209ENST00000565384 RNF17Q9BXT8 1623 aaKnown RBP18.41■□□□□ 0.54
NSMCE1-209ENST00000565384 SOCS7O14512 581 aa18.41■□□□□ 0.54
NSMCE1-209ENST00000565384 CPS1P31327 1500 aa18.4■□□□□ 0.54
NSMCE1-209ENST00000565384 UGGT1Q9NYU2 1555 aa18.4■□□□□ 0.54
NSMCE1-209ENST00000565384 ABCC3O15438 1527 aa18.39■□□□□ 0.54
NSMCE1-209ENST00000565384 ZC3H13Q5T200 1668 aaKnown RBP18.39■□□□□ 0.53
NSMCE1-209ENST00000565384 SHANK2Q9UPX8 1470 aa18.39■□□□□ 0.53
NSMCE1-209ENST00000565384 MAP3K1Q13233 1512 aa18.39■□□□□ 0.53
NSMCE1-209ENST00000565384 EIF2AK4Q9P2K8 1649 aaKnown RBP18.38■□□□□ 0.53
NSMCE1-209ENST00000565384 KANK4Q5T7N3 995 aaPredicted RBP18.38■□□□□ 0.53
NSMCE1-209ENST00000565384 ANKLE2Q86XL3 938 aa18.38■□□□□ 0.53
NSMCE1-209ENST00000565384 THEMISQ8N1K5 641 aaPredicted RBP18.38■□□□□ 0.53
NSMCE1-209ENST00000565384 LOC105371045A0A1W2PR82 267 aa18.37■□□□□ 0.53
NSMCE1-209ENST00000565384 MYOM3Q5VTT5 1437 aa18.37■□□□□ 0.53
NSMCE1-209ENST00000565384 DEPDC5O75140 1603 aa18.36■□□□□ 0.53
NSMCE1-209ENST00000565384 NPHP4O75161 1426 aaPredicted RBP18.36■□□□□ 0.53
NSMCE1-209ENST00000565384 MROH1Q8NDA8 1641 aa18.35■□□□□ 0.53
NSMCE1-209ENST00000565384 VWDEQ8N2E2 1590 aa18.35■□□□□ 0.53
NSMCE1-209ENST00000565384 MED14O60244 1454 aa18.35■□□□□ 0.53
NSMCE1-209ENST00000565384 ERVK-7P63135 1459 aa18.34■□□□□ 0.53
NSMCE1-209ENST00000565384 SCAF1Q9H7N4 1312 aaKnown RBP18.33■□□□□ 0.53
NSMCE1-209ENST00000565384 DUOX2Q9NRD8 1548 aa18.32■□□□□ 0.52
NSMCE1-209ENST00000565384 CEP152O94986 1710 aa18.32■□□□□ 0.52
NSMCE1-209ENST00000565384 IQGAP1P46940 1657 aa18.31■□□□□ 0.52
NSMCE1-209ENST00000565384 TOM1O60784 492 aa18.31■□□□□ 0.52
NSMCE1-209ENST00000565384 PIP4K2BP78356 416 aa18.31■□□□□ 0.52
NSMCE1-209ENST00000565384 HSPA1LP34931 641 aa18.29■□□□□ 0.52
NSMCE1-209ENST00000565384 CROCC2H7BZ55 1655 aa18.27■□□□□ 0.52
NSMCE1-209ENST00000565384 PRDM15P57071 1507 aaPredicted RBP18.27■□□□□ 0.51
NSMCE1-209ENST00000565384 KIF15Q9NS87 1388 aa18.27■□□□□ 0.51
NSMCE1-209ENST00000565384 UBR1Q8IWV7 1749 aa18.26■□□□□ 0.51
NSMCE1-209ENST00000565384 ABCC5O15440 1437 aa18.26■□□□□ 0.51
NSMCE1-209ENST00000565384 ERBINQ96RT1 1412 aa18.25■□□□□ 0.51
NSMCE1-209ENST00000565384 PTPN23Q9H3S7 1636 aa18.25■□□□□ 0.51
NSMCE1-209ENST00000565384 ALKQ9UM73 1620 aa18.25■□□□□ 0.51
NSMCE1-209ENST00000565384 MED1Q15648 1581 aaPredicted RBP18.24■□□□□ 0.51
NSMCE1-209ENST00000565384 STRCP1A6NGW2 1772 aa18.24■□□□□ 0.51
NSMCE1-209ENST00000565384 ARHGAP31Q2M1Z3 1444 aa18.23■□□□□ 0.51
NSMCE1-209ENST00000565384 SYNMO15061 1565 aa18.23■□□□□ 0.51
NSMCE1-209ENST00000565384 SCAF11Q99590 1463 aaKnown RBP18.23■□□□□ 0.51
NSMCE1-209ENST00000565384 LRRC7Q96NW7 1537 aa18.23■□□□□ 0.51
NSMCE1-209ENST00000565384 RRP7BPQ9NSQ0 103 aa18.22■□□□□ 0.51
NSMCE1-209ENST00000565384 DAPK1P53355 1430 aa18.22■□□□□ 0.51
NSMCE1-209ENST00000565384 CFAP65Q6ZU64 1925 aaKnown RBP18.21■□□□□ 0.51
NSMCE1-209ENST00000565384 ARHGAP23Q9P227 1491 aa18.21■□□□□ 0.51
NSMCE1-209ENST00000565384 SLIT1O75093 1534 aa18.2■□□□□ 0.5
NSMCE1-209ENST00000565384 APLP2Q06481 763 aa18.2■□□□□ 0.5
NSMCE1-209ENST00000565384 FGD6Q6ZV73 1430 aa18.18■□□□□ 0.5
NSMCE1-209ENST00000565384 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.18■□□□□ 0.5
NSMCE1-209ENST00000565384 LTKP29376 864 aa18.17■□□□□ 0.5
NSMCE1-209ENST00000565384 TXNDC2Q86VQ3 553 aa18.17■□□□□ 0.5
NSMCE1-209ENST00000565384 KANK1Q14678 1352 aa18.17■□□□□ 0.5
NSMCE1-209ENST00000565384 PIK3C2BO00750 1634 aa18.16■□□□□ 0.5
NSMCE1-209ENST00000565384 LMTK2Q8IWU2 1503 aa18.14■□□□□ 0.49
NSMCE1-209ENST00000565384 EID1Q9Y6B2 187 aa18.14■□□□□ 0.49
NSMCE1-209ENST00000565384 ANKRD30AQ9BXX3 1397 aa18.14■□□□□ 0.49
NSMCE1-209ENST00000565384 TMEM2Q9UHN6 1383 aa18.13■□□□□ 0.49
NSMCE1-209ENST00000565384 SENP3Q9H4L4 574 aaPredicted RBP18.12■□□□□ 0.49
NSMCE1-209ENST00000565384 STAG3Q9UJ98 1225 aa18.12■□□□□ 0.49
NSMCE1-209ENST00000565384 CHIC2Q9UKJ5 165 aa18.12■□□□□ 0.49
NSMCE1-209ENST00000565384 EFCAB6Q5THR3 1501 aa18.11■□□□□ 0.49
NSMCE1-209ENST00000565384 KDM5AP29375 1690 aaKnown RBP18.1■□□□□ 0.49
NSMCE1-209ENST00000565384 PHF23Q9BUL5 403 aaPredicted RBP18.09■□□□□ 0.49
NSMCE1-209ENST00000565384 XIRP1Q702N8 1843 aaKnown RBP18.08■□□□□ 0.48
NSMCE1-209ENST00000565384 IDI1Q13907 227 aa18.08■□□□□ 0.48
NSMCE1-209ENST00000565384 ADGRL2O95490 1459 aa18.07■□□□□ 0.48
NSMCE1-209ENST00000565384 NOS1P29475 1434 aa18.07■□□□□ 0.48
NSMCE1-209ENST00000565384 ADGRB3O60242 1522 aa18.06■□□□□ 0.48
NSMCE1-209ENST00000565384 TET3O43151 1660 aa18.03■□□□□ 0.48
NSMCE1-209ENST00000565384 TMEM94Q12767 1356 aa18.03■□□□□ 0.48
NSMCE1-209ENST00000565384 FAM50AQ14320 339 aaKnown RBP18.02■□□□□ 0.48
NSMCE1-209ENST00000565384 ANKRD50Q9ULJ7 1429 aa18.01■□□□□ 0.47
NSMCE1-209ENST00000565384 KCNA6P17658 529 aa18.01■□□□□ 0.47
NSMCE1-209ENST00000565384 SLC26A8Q96RN1 970 aa18.01■□□□□ 0.47
NSMCE1-209ENST00000565384 RPRD2Q5VT52 1461 aaKnown RBP18.01■□□□□ 0.47
NSMCE1-209ENST00000565384 SLC52A1Q9NWF4 448 aa18■□□□□ 0.47
NSMCE1-209ENST00000565384 NWD1Q149M9 1564 aa18■□□□□ 0.47
NSMCE1-209ENST00000565384 FAM135BQ49AJ0 1406 aa17.99■□□□□ 0.47
NSMCE1-209ENST00000565384 NKTRP30414 1462 aaKnown RBP17.98■□□□□ 0.47
NSMCE1-209ENST00000565384 PROSER2Q86WR7 435 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms