RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 NISCHQ9Y2I1 1504 aa29.27■■■□□ 2.28
NSMCE1-209ENST00000565384 ABCC9O60706 1549 aa26.42■■□□□ 1.82
NSMCE1-209ENST00000565384 CCDC180Q9P1Z9 1646 aa26.32■■□□□ 1.8
NSMCE1-209ENST00000565384 RB1CC1Q8TDY2 1594 aa25.1■■□□□ 1.61
NSMCE1-209ENST00000565384 NACADO15069 1562 aa24.9■■□□□ 1.58
NSMCE1-209ENST00000565384 DNAJC5BQ9UF47 199 aa24.84■■□□□ 1.57
NSMCE1-209ENST00000565384 DCAF8L2P0C7V8 631 aa24.72■■□□□ 1.55
NSMCE1-209ENST00000565384 PABPN1Q86U42 306 aaKnown RBP eCLIP24.56■■□□□ 1.52
NSMCE1-209ENST00000565384 MYO15BQ96JP2 1530 aa24.52■■□□□ 1.52
NSMCE1-209ENST00000565384 UNC13AQ9UPW8 1703 aa24.52■■□□□ 1.52
NSMCE1-209ENST00000565384 BICRAQ9NZM4 1560 aa24.37■■□□□ 1.49
NSMCE1-209ENST00000565384 ZCCHC6Q5VYS8 1495 aaKnown RBP24.26■■□□□ 1.47
NSMCE1-209ENST00000565384 DCAF1Q9Y4B6 1507 aa24.17■■□□□ 1.46
NSMCE1-209ENST00000565384 SHROOM4Q9ULL8 1493 aa24.04■■□□□ 1.44
NSMCE1-209ENST00000565384 SCRIBQ14160 1630 aa23.98■■□□□ 1.43
NSMCE1-209ENST00000565384 CC2D2AQ9P2K1 1620 aa23.86■■□□□ 1.41
NSMCE1-209ENST00000565384 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
NSMCE1-209ENST00000565384 EIF4G1Q04637 1599 aaKnown RBP23.79■■□□□ 1.4
NSMCE1-209ENST00000565384 NCAPD3P42695 1498 aa22.98■■□□□ 1.27
NSMCE1-209ENST00000565384 ATAD2BQ9ULI0 1458 aa22.91■■□□□ 1.26
NSMCE1-209ENST00000565384 DNAJC5Q9H3Z4 198 aa22.89■■□□□ 1.25
NSMCE1-209ENST00000565384 SMARCA4P51532 1647 aa22.86■■□□□ 1.25
NSMCE1-209ENST00000565384 SMARCA2P51531 1590 aa22.84■■□□□ 1.25
NSMCE1-209ENST00000565384 CUX2O14529 1486 aa22.82■■□□□ 1.24
NSMCE1-209ENST00000565384 ERCC6Q03468 1493 aa22.82■■□□□ 1.24
NSMCE1-209ENST00000565384 HMGXB3Q12766 1538 aa22.82■■□□□ 1.24
NSMCE1-209ENST00000565384 BAZ1AQ9NRL2 1556 aaPredicted RBP22.73■■□□□ 1.23
NSMCE1-209ENST00000565384 BAZ1BQ9UIG0 1483 aaKnown RBP22.68■■□□□ 1.22
NSMCE1-209ENST00000565384 NESP48681 1621 aa22.66■■□□□ 1.22
NSMCE1-209ENST00000565384 PEG3Q9GZU2 1588 aa22.64■■□□□ 1.22
NSMCE1-209ENST00000565384 MROH2BQ7Z745 1585 aa22.55■■□□□ 1.2
NSMCE1-209ENST00000565384 LAMC3Q9Y6N6 1575 aa22.49■■□□□ 1.19
NSMCE1-209ENST00000565384 THOC2Q8NI27 1593 aaKnown RBP22.47■■□□□ 1.19
NSMCE1-209ENST00000565384 KIF21AQ7Z4S6 1674 aa22.36■■□□□ 1.17
NSMCE1-209ENST00000565384 PDS5BQ9NTI5 1447 aa22.36■■□□□ 1.17
NSMCE1-209ENST00000565384 CADPSQ9ULU8 1353 aa22.28■■□□□ 1.16
NSMCE1-209ENST00000565384 WIZO95785 1651 aa22.28■■□□□ 1.16
NSMCE1-209ENST00000565384 MRC2Q9UBG0 1479 aa22.19■■□□□ 1.14
NSMCE1-209ENST00000565384 WDR62O43379 1518 aa22.14■■□□□ 1.13
NSMCE1-209ENST00000565384 CEP164Q9UPV0 1460 aa22.08■■□□□ 1.12
NSMCE1-209ENST00000565384 RSF1Q96T23 1441 aaPredicted RBP22.04■■□□□ 1.12
NSMCE1-209ENST00000565384 FANCD2Q9BXW9 1451 aa22.03■■□□□ 1.12
NSMCE1-209ENST00000565384 CFTRP13569 1480 aa22.01■■□□□ 1.11
NSMCE1-209ENST00000565384 TOP2AP11388 1531 aaKnown RBP22.01■■□□□ 1.11
NSMCE1-209ENST00000565384 TRIM41Q8WV44 630 aa21.86■■□□□ 1.09
NSMCE1-209ENST00000565384 URB2Q14146 1524 aaKnown RBP21.85■■□□□ 1.09
NSMCE1-209ENST00000565384 PRDM2Q13029 1718 aa21.78■■□□□ 1.08
NSMCE1-209ENST00000565384 CCDC88BA6NC98 1476 aa21.74■■□□□ 1.07
NSMCE1-209ENST00000565384 OSCARQ8IYS5 282 aa21.72■■□□□ 1.07
NSMCE1-209ENST00000565384 IFT140Q96RY7 1462 aa21.64■■□□□ 1.05
NSMCE1-209ENST00000565384 TOPBP1Q92547 1522 aa21.61■■□□□ 1.05
NSMCE1-209ENST00000565384 ZNF608Q9ULD9 1512 aaPredicted RBP21.61■■□□□ 1.05
NSMCE1-209ENST00000565384 ABCC8Q09428 1581 aa21.54■■□□□ 1.04
NSMCE1-209ENST00000565384 DNMBPQ6XZF7 1577 aa21.53■■□□□ 1.04
NSMCE1-209ENST00000565384 EIF4G3O43432 1585 aaKnown RBP21.5■■□□□ 1.03
NSMCE1-209ENST00000565384 RIMBP3CA6NJZ7 1639 aa21.48■■□□□ 1.03
NSMCE1-209ENST00000565384 RIMBP3BA6NNM3 1639 aa21.48■■□□□ 1.03
NSMCE1-209ENST00000565384 RIMBP3Q9UFD9 1639 aa21.48■■□□□ 1.03
NSMCE1-209ENST00000565384 TARBP1Q13395 1621 aaKnown RBP21.42■■□□□ 1.02
NSMCE1-209ENST00000565384 ARHGEF11O15085 1522 aa21.41■■□□□ 1.02
NSMCE1-209ENST00000565384 AQRO60306 1485 aaKnown RBP eCLIP21.39■■□□□ 1.02
NSMCE1-209ENST00000565384 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.01
NSMCE1-209ENST00000565384 CHD1O14646 1710 aa21.34■■□□□ 1.01
NSMCE1-209ENST00000565384 RAD54L2Q9Y4B4 1467 aa21.31■■□□□ 1
NSMCE1-209ENST00000565384 SOGA1O94964 1423 aa21.28■■□□□ 1
NSMCE1-209ENST00000565384 FBLN2P98095 1184 aa21.26■□□□□ 0.99
NSMCE1-209ENST00000565384 TDRD9Q8NDG6 1382 aaKnown RBP21.24■□□□□ 0.99
NSMCE1-209ENST00000565384 FGD5Q6ZNL6 1462 aa21.24■□□□□ 0.99
NSMCE1-209ENST00000565384 CYB5RLQ6IPT4 315 aa21.23■□□□□ 0.99
NSMCE1-209ENST00000565384 WDR97A6NE52 1622 aa21.21■□□□□ 0.99
NSMCE1-209ENST00000565384 SNAPC4Q5SXM2 1469 aa21.2■□□□□ 0.98
NSMCE1-209ENST00000565384 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
NSMCE1-209ENST00000565384 CUX1P39880 1505 aa21.19■□□□□ 0.98
NSMCE1-209ENST00000565384 MAGI1Q96QZ7 1491 aaPredicted RBP21.12■□□□□ 0.97
NSMCE1-209ENST00000565384 CLASP1Q7Z460 1538 aa21.11■□□□□ 0.97
NSMCE1-209ENST00000565384 GRIN2BQ13224 1484 aa21.11■□□□□ 0.97
NSMCE1-209ENST00000565384 SYNJ1O43426 1573 aa21.09■□□□□ 0.97
NSMCE1-209ENST00000565384 CHMP7Q8WUX9 453 aaPredicted RBP21.08■□□□□ 0.97
NSMCE1-209ENST00000565384 SYNJ2O15056 1496 aa21.06■□□□□ 0.96
NSMCE1-209ENST00000565384 TRHP20396 242 aaPredicted RBP21.03■□□□□ 0.96
NSMCE1-209ENST00000565384 PBRM1Q86U86 1689 aa21.02■□□□□ 0.96
NSMCE1-209ENST00000565384 GAPVD1Q14C86 1478 aa21.01■□□□□ 0.95
NSMCE1-209ENST00000565384 ABCA10Q8WWZ4 1543 aa20.99■□□□□ 0.95
NSMCE1-209ENST00000565384 ABCA5Q8WWZ7 1642 aa20.97■□□□□ 0.95
NSMCE1-209ENST00000565384 SUPT5HO00267 1087 aaKnown RBP20.97■□□□□ 0.95
NSMCE1-209ENST00000565384 WRNQ14191 1432 aaPredicted RBP eCLIP20.87■□□□□ 0.93
NSMCE1-209ENST00000565384 GRIN2AQ12879 1464 aa20.84■□□□□ 0.93
NSMCE1-209ENST00000565384 BIVM-ERCC5R4GMW8 1640 aa20.83■□□□□ 0.93
NSMCE1-209ENST00000565384 ADAMTS12P58397 1594 aa20.83■□□□□ 0.92
NSMCE1-209ENST00000565384 TOP2BQ02880 1626 aa20.82■□□□□ 0.92
NSMCE1-209ENST00000565384 CEP170Q5SW79 1584 aa20.78■□□□□ 0.92
NSMCE1-209ENST00000565384 NUP160Q12769 1436 aa20.78■□□□□ 0.92
NSMCE1-209ENST00000565384 ERCC6L2Q5T890 1561 aa20.77■□□□□ 0.92
NSMCE1-209ENST00000565384 FHAD1B1AJZ9 1412 aa20.75■□□□□ 0.91
NSMCE1-209ENST00000565384 ERICH3Q5RHP9 1530 aa20.72■□□□□ 0.91
NSMCE1-209ENST00000565384 SHROOM2Q13796 1616 aa20.69■□□□□ 0.9
NSMCE1-209ENST00000565384 PRG4Q92954 1404 aaPredicted RBP20.57■□□□□ 0.88
NSMCE1-209ENST00000565384 RUSC2Q8N2Y8 1516 aa20.54■□□□□ 0.88
NSMCE1-209ENST00000565384 JPH4Q96JJ6 628 aa20.53■□□□□ 0.88
NSMCE1-209ENST00000565384 AEBP2Q6ZN18 517 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms