RNA–Protein interactions for RNA: ENST00000565362.5

PDXDC1-211, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-211ENST00000565362 ZNF142P52746 1687 aaPredicted RBP16.93■□□□□ 0.3
PDXDC1-211ENST00000565362 PLA2R1Q13018 1463 aa16.93■□□□□ 0.3
PDXDC1-211ENST00000565362 CEP170BQ9Y4F5 1589 aaPredicted RBP16.92■□□□□ 0.3
PDXDC1-211ENST00000565362 KDM5DQ9BY66 1539 aa16.91■□□□□ 0.3
PDXDC1-211ENST00000565362 PKD2Q13563 968 aa16.91■□□□□ 0.3
PDXDC1-211ENST00000565362 PZPP20742 1482 aa16.91■□□□□ 0.3
PDXDC1-211ENST00000565362 WASHC2CQ9Y4E1 1318 aa16.91■□□□□ 0.3
PDXDC1-211ENST00000565362 LTBP4Q8N2S1 1624 aa16.9■□□□□ 0.3
PDXDC1-211ENST00000565362 TCOF1Q13428 1488 aaKnown RBP16.9■□□□□ 0.3
PDXDC1-211ENST00000565362 NCKAP5LQ9HCH0 1330 aa16.9■□□□□ 0.3
PDXDC1-211ENST00000565362 A2ML1A8K2U0 1454 aa16.89■□□□□ 0.29
PDXDC1-211ENST00000565362 FBXO31Q5XUX0 539 aaPredicted RBP16.89■□□□□ 0.29
PDXDC1-211ENST00000565362 TNRQ92752 1358 aa16.88■□□□□ 0.29
PDXDC1-211ENST00000565362 APLP2Q06481 763 aa16.87■□□□□ 0.29
PDXDC1-211ENST00000565362 DNMT1P26358 1616 aaKnown RBP16.85■□□□□ 0.29
PDXDC1-211ENST00000565362 RNF17Q9BXT8 1623 aaKnown RBP16.85■□□□□ 0.29
PDXDC1-211ENST00000565362 IQSEC2Q5JU85 1478 aa16.85■□□□□ 0.29
PDXDC1-211ENST00000565362 ABCC5O15440 1437 aa16.84■□□□□ 0.29
PDXDC1-211ENST00000565362 EIF2AK4Q9P2K8 1649 aaKnown RBP16.84■□□□□ 0.29
PDXDC1-211ENST00000565362 ABCC3O15438 1527 aa16.82■□□□□ 0.28
PDXDC1-211ENST00000565362 DUOX2Q9NRD8 1548 aa16.82■□□□□ 0.28
PDXDC1-211ENST00000565362 SHANK2Q9UPX8 1470 aa16.82■□□□□ 0.28
PDXDC1-211ENST00000565362 NLRP1Q9C000 1473 aa16.81■□□□□ 0.28
PDXDC1-211ENST00000565362 ZNF335Q9H4Z2 1342 aaPredicted RBP16.81■□□□□ 0.28
PDXDC1-211ENST00000565362 MROH1Q8NDA8 1641 aa16.81■□□□□ 0.28
PDXDC1-211ENST00000565362 PTPN23Q9H3S7 1636 aa16.81■□□□□ 0.28
PDXDC1-211ENST00000565362 FGD6Q6ZV73 1430 aa16.8■□□□□ 0.28
PDXDC1-211ENST00000565362 KIF15Q9NS87 1388 aa16.79■□□□□ 0.28
PDXDC1-211ENST00000565362 ZC3H13Q5T200 1668 aaKnown RBP16.79■□□□□ 0.28
PDXDC1-211ENST00000565362 THEMISQ8N1K5 641 aaPredicted RBP16.79■□□□□ 0.28
PDXDC1-211ENST00000565362 DAPK1P53355 1430 aa16.79■□□□□ 0.28
PDXDC1-211ENST00000565362 SPATA31D1Q6ZQQ2 1576 aa16.78■□□□□ 0.28
PDXDC1-211ENST00000565362 ERBINQ96RT1 1412 aa16.78■□□□□ 0.28
PDXDC1-211ENST00000565362 CROCC2H7BZ55 1655 aa16.76■□□□□ 0.27
PDXDC1-211ENST00000565362 ANKLE2Q86XL3 938 aa16.76■□□□□ 0.27
PDXDC1-211ENST00000565362 RRP7BPQ9NSQ0 103 aa16.76■□□□□ 0.27
PDXDC1-211ENST00000565362 NEURL4Q96JN8 1562 aa16.76■□□□□ 0.27
PDXDC1-211ENST00000565362 UGGT1Q9NYU2 1555 aa16.76■□□□□ 0.27
PDXDC1-211ENST00000565362 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.76■□□□□ 0.27
PDXDC1-211ENST00000565362 ERVK-7P63135 1459 aa16.75■□□□□ 0.27
PDXDC1-211ENST00000565362 ARHGAP31Q2M1Z3 1444 aa16.74■□□□□ 0.27
PDXDC1-211ENST00000565362 PRDM15P57071 1507 aaPredicted RBP16.74■□□□□ 0.27
PDXDC1-211ENST00000565362 POLR1AO95602 1720 aaPredicted RBP16.73■□□□□ 0.27
PDXDC1-211ENST00000565362 MED14O60244 1454 aa16.73■□□□□ 0.27
PDXDC1-211ENST00000565362 ANKRD30AQ9BXX3 1397 aa16.72■□□□□ 0.27
PDXDC1-211ENST00000565362 CEP152O94986 1710 aa16.71■□□□□ 0.27
PDXDC1-211ENST00000565362 DEPDC5O75140 1603 aa16.7■□□□□ 0.26
PDXDC1-211ENST00000565362 CHIC2Q9UKJ5 165 aa16.7■□□□□ 0.26
PDXDC1-211ENST00000565362 NPHP4O75161 1426 aaPredicted RBP16.69■□□□□ 0.26
PDXDC1-211ENST00000565362 ADGRL2O95490 1459 aa16.68■□□□□ 0.26
PDXDC1-211ENST00000565362 CPS1P31327 1500 aa16.67■□□□□ 0.26
PDXDC1-211ENST00000565362 LMTK2Q8IWU2 1503 aa16.67■□□□□ 0.26
PDXDC1-211ENST00000565362 UBAP1LF5GYI3 381 aa16.67■□□□□ 0.26
PDXDC1-211ENST00000565362 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.67■□□□□ 0.269e-8■■□□□ 12.3
PDXDC1-211ENST00000565362 KANK1Q14678 1352 aa16.66■□□□□ 0.26
PDXDC1-211ENST00000565362 VWDEQ8N2E2 1590 aa16.66■□□□□ 0.26
PDXDC1-211ENST00000565362 CFAP65Q6ZU64 1925 aaKnown RBP16.64■□□□□ 0.26
PDXDC1-211ENST00000565362 FAM50AQ14320 339 aaKnown RBP16.64■□□□□ 0.25
PDXDC1-211ENST00000565362 ARHGAP23Q9P227 1491 aa16.64■□□□□ 0.25
PDXDC1-211ENST00000565362 UBR1Q8IWV7 1749 aa16.64■□□□□ 0.25
PDXDC1-211ENST00000565362 IQGAP1P46940 1657 aa16.62■□□□□ 0.25
PDXDC1-211ENST00000565362 SLIT1O75093 1534 aa16.62■□□□□ 0.25
PDXDC1-211ENST00000565362 LTKP29376 864 aa16.61■□□□□ 0.25
PDXDC1-211ENST00000565362 ANKRD50Q9ULJ7 1429 aa16.61■□□□□ 0.25
PDXDC1-211ENST00000565362 SCAF11Q99590 1463 aaKnown RBP16.61■□□□□ 0.25
PDXDC1-211ENST00000565362 NOS1P29475 1434 aa16.6■□□□□ 0.25
PDXDC1-211ENST00000565362 IDI1Q13907 227 aa16.59■□□□□ 0.25
PDXDC1-211ENST00000565362 TXNDC2Q86VQ3 553 aa16.59■□□□□ 0.25
PDXDC1-211ENST00000565362 TOM1O60784 492 aa16.58■□□□□ 0.24
PDXDC1-211ENST00000565362 DISP3Q9P2K9 1392 aa16.58■□□□□ 0.24
PDXDC1-211ENST00000565362 TMEM2Q9UHN6 1383 aa16.58■□□□□ 0.24
PDXDC1-211ENST00000565362 PIK3C2BO00750 1634 aa16.57■□□□□ 0.24
PDXDC1-211ENST00000565362 EFCAB6Q5THR3 1501 aa16.57■□□□□ 0.24
PDXDC1-211ENST00000565362 EID1Q9Y6B2 187 aa16.56■□□□□ 0.24
PDXDC1-211ENST00000565362 KDM5AP29375 1690 aaKnown RBP16.56■□□□□ 0.24
PDXDC1-211ENST00000565362 SYNMO15061 1565 aa16.55■□□□□ 0.24
PDXDC1-211ENST00000565362 SLC52A1Q9NWF4 448 aa16.55■□□□□ 0.24
PDXDC1-211ENST00000565362 LRRC7Q96NW7 1537 aa16.55■□□□□ 0.24
PDXDC1-211ENST00000565362 RPRD2Q5VT52 1461 aaKnown RBP16.54■□□□□ 0.24
PDXDC1-211ENST00000565362 STRCP1A6NGW2 1772 aa16.54■□□□□ 0.24
PDXDC1-211ENST00000565362 ROCK1Q13464 1354 aa16.54■□□□□ 0.24
PDXDC1-211ENST00000565362 STAG3Q9UJ98 1225 aa16.54■□□□□ 0.24
PDXDC1-211ENST00000565362 ALKQ9UM73 1620 aa16.52■□□□□ 0.24
PDXDC1-211ENST00000565362 PIP4K2BP78356 416 aa16.51■□□□□ 0.23
PDXDC1-211ENST00000565362 ILDR2Q71H61 639 aa16.51■□□□□ 0.23
PDXDC1-211ENST00000565362 HSPA1LP34931 641 aa16.5■□□□□ 0.23
PDXDC1-211ENST00000565362 ADGRB3O60242 1522 aa16.5■□□□□ 0.23
PDXDC1-211ENST00000565362 UNC13BO14795 1591 aa16.49■□□□□ 0.23
PDXDC1-211ENST00000565362 TET3O43151 1660 aa16.49■□□□□ 0.23
PDXDC1-211ENST00000565362 SCAF1Q9H7N4 1312 aaKnown RBP16.48■□□□□ 0.23
PDXDC1-211ENST00000565362 KCNA6P17658 529 aa16.45■□□□□ 0.22
PDXDC1-211ENST00000565362 PPARGC1BQ86YN6 1023 aaKnown RBP16.45■□□□□ 0.22
PDXDC1-211ENST00000565362 ZFYVE9O95405 1425 aa16.45■□□□□ 0.22
PDXDC1-211ENST00000565362 GCC2Q8IWJ2 1684 aa16.44■□□□□ 0.22
PDXDC1-211ENST00000565362 SLC26A8Q96RN1 970 aa16.43■□□□□ 0.22
PDXDC1-211ENST00000565362 IQGAP3Q86VI3 1631 aa16.43■□□□□ 0.22
PDXDC1-211ENST00000565362 NUP155O75694 1391 aa16.42■□□□□ 0.22
PDXDC1-211ENST00000565362 ITGAEP38570 1179 aa16.42■□□□□ 0.22
PDXDC1-211ENST00000565362 TMEM131LA2VDJ0 1609 aa16.41■□□□□ 0.22
PDXDC1-211ENST00000565362 E9PCH4 1651 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms