RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 CAMSAP1Q5T5Y3 1602 aa26.47■■□□□ 1.83
CCNF-203ENST00000564236 KDM5DQ9BY66 1539 aa26.46■■□□□ 1.83
CCNF-203ENST00000564236 KIF3BO15066 747 aa26.46■■□□□ 1.83
CCNF-203ENST00000564236 CEP170BQ9Y4F5 1589 aaPredicted RBP26.46■■□□□ 1.83
CCNF-203ENST00000564236 PZPP20742 1482 aa26.42■■□□□ 1.82
CCNF-203ENST00000564236 TCOF1Q13428 1488 aaKnown RBP26.42■■□□□ 1.82
CCNF-203ENST00000564236 LTBP4Q8N2S1 1624 aa26.4■■□□□ 1.82
CCNF-203ENST00000564236 A2ML1A8K2U0 1454 aa26.4■■□□□ 1.82
CCNF-203ENST00000564236 PKD2Q13563 968 aa26.39■■□□□ 1.82
CCNF-203ENST00000564236 RNF17Q9BXT8 1623 aaKnown RBP26.38■■□□□ 1.81
CCNF-203ENST00000564236 WASHC2CQ9Y4E1 1318 aa26.37■■□□□ 1.81
CCNF-203ENST00000564236 IQSEC2Q5JU85 1478 aa26.36■■□□□ 1.81
CCNF-203ENST00000564236 EIF2AK4Q9P2K8 1649 aaKnown RBP26.36■■□□□ 1.81
CCNF-203ENST00000564236 TNRQ92752 1358 aa26.34■■□□□ 1.81
CCNF-203ENST00000564236 SHANK2Q9UPX8 1470 aa26.34■■□□□ 1.81
CCNF-203ENST00000564236 DNMT1P26358 1616 aaKnown RBP26.33■■□□□ 1.81
CCNF-203ENST00000564236 NCKAP5LQ9HCH0 1330 aa26.33■■□□□ 1.81
CCNF-203ENST00000564236 FBXO31Q5XUX0 539 aaPredicted RBP26.31■■□□□ 1.8
CCNF-203ENST00000564236 NLRP1Q9C000 1473 aa26.3■■□□□ 1.8
CCNF-203ENST00000564236 ABCC3O15438 1527 aa26.29■■□□□ 1.8
CCNF-203ENST00000564236 DUOX2Q9NRD8 1548 aa26.29■■□□□ 1.8
CCNF-203ENST00000564236 ZC3H13Q5T200 1668 aaKnown RBP26.29■■□□□ 1.8
CCNF-203ENST00000564236 APLP2Q06481 763 aa26.29■■□□□ 1.8
CCNF-203ENST00000564236 ABCC5O15440 1437 aa26.29■■□□□ 1.8
CCNF-203ENST00000564236 MROH1Q8NDA8 1641 aa26.28■■□□□ 1.8
CCNF-203ENST00000564236 PTPN23Q9H3S7 1636 aa26.26■■□□□ 1.79
CCNF-203ENST00000564236 FGD6Q6ZV73 1430 aa26.26■■□□□ 1.79
CCNF-203ENST00000564236 SPATA31D1Q6ZQQ2 1576 aa26.24■■□□□ 1.79
CCNF-203ENST00000564236 ERBINQ96RT1 1412 aa26.24■■□□□ 1.79
CCNF-203ENST00000564236 CROCC2H7BZ55 1655 aa26.24■■□□□ 1.79
CCNF-203ENST00000564236 DAPK1P53355 1430 aa26.22■■□□□ 1.79
CCNF-203ENST00000564236 KIF15Q9NS87 1388 aa26.22■■□□□ 1.79
CCNF-203ENST00000564236 ZNF335Q9H4Z2 1342 aaPredicted RBP26.21■■□□□ 1.79
CCNF-203ENST00000564236 PRDM15P57071 1507 aaPredicted RBP26.2■■□□□ 1.79
CCNF-203ENST00000564236 NEURL4Q96JN8 1562 aa26.2■■□□□ 1.78
CCNF-203ENST00000564236 ERVK-7P63135 1459 aa26.18■■□□□ 1.78
CCNF-203ENST00000564236 ARHGAP31Q2M1Z3 1444 aa26.18■■□□□ 1.78
CCNF-203ENST00000564236 THEMISQ8N1K5 641 aaPredicted RBP26.18■■□□□ 1.78
CCNF-203ENST00000564236 UGGT1Q9NYU2 1555 aa26.18■■□□□ 1.78
CCNF-203ENST00000564236 MED14O60244 1454 aa26.16■■□□□ 1.78
CCNF-203ENST00000564236 POLR1AO95602 1720 aaPredicted RBP26.15■■□□□ 1.78
CCNF-203ENST00000564236 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.14■■□□□ 1.78
CCNF-203ENST00000564236 DEPDC5O75140 1603 aa26.14■■□□□ 1.77
CCNF-203ENST00000564236 ANKLE2Q86XL3 938 aa26.13■■□□□ 1.77
CCNF-203ENST00000564236 RRP7BPQ9NSQ0 103 aa26.12■■□□□ 1.77
CCNF-203ENST00000564236 ANKRD30AQ9BXX3 1397 aa26.1■■□□□ 1.77
CCNF-203ENST00000564236 ADGRL2O95490 1459 aa26.1■■□□□ 1.77
CCNF-203ENST00000564236 CEP152O94986 1710 aa26.09■■□□□ 1.77
CCNF-203ENST00000564236 LMTK2Q8IWU2 1503 aa26.08■■□□□ 1.77
CCNF-203ENST00000564236 VWDEQ8N2E2 1590 aa26.07■■□□□ 1.76
CCNF-203ENST00000564236 CPS1P31327 1500 aa26.07■■□□□ 1.76
CCNF-203ENST00000564236 NPHP4O75161 1426 aaPredicted RBP26.05■■□□□ 1.76
CCNF-203ENST00000564236 KANK1Q14678 1352 aa26.02■■□□□ 1.76
CCNF-203ENST00000564236 UBR1Q8IWV7 1749 aa26.01■■□□□ 1.75
CCNF-203ENST00000564236 ARHGAP23Q9P227 1491 aa26.01■■□□□ 1.75
CCNF-203ENST00000564236 SLIT1O75093 1534 aa25.99■■□□□ 1.75
CCNF-203ENST00000564236 CHIC2Q9UKJ5 165 aa25.99■■□□□ 1.75
CCNF-203ENST00000564236 IQGAP1P46940 1657 aa25.99■■□□□ 1.75
CCNF-203ENST00000564236 UBAP1LF5GYI3 381 aa25.97■■□□□ 1.75
CCNF-203ENST00000564236 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.95■■□□□ 1.74
CCNF-203ENST00000564236 SCAF11Q99590 1463 aaKnown RBP25.95■■□□□ 1.74
CCNF-203ENST00000564236 EFCAB6Q5THR3 1501 aa25.93■■□□□ 1.74
CCNF-203ENST00000564236 NOS1P29475 1434 aa25.93■■□□□ 1.74
CCNF-203ENST00000564236 ANKRD50Q9ULJ7 1429 aa25.93■■□□□ 1.74
CCNF-203ENST00000564236 KDM5AP29375 1690 aaKnown RBP25.93■■□□□ 1.74
CCNF-203ENST00000564236 FAM50AQ14320 339 aaKnown RBP25.92■■□□□ 1.74
CCNF-203ENST00000564236 LTKP29376 864 aa25.89■■□□□ 1.74
CCNF-203ENST00000564236 TMEM2Q9UHN6 1383 aa25.89■■□□□ 1.74
CCNF-203ENST00000564236 RPRD2Q5VT52 1461 aaKnown RBP25.89■■□□□ 1.73
CCNF-203ENST00000564236 PIK3C2BO00750 1634 aa25.88■■□□□ 1.73
CCNF-203ENST00000564236 SYNMO15061 1565 aa25.87■■□□□ 1.73
CCNF-203ENST00000564236 ROCK1Q13464 1354 aa25.87■■□□□ 1.73
CCNF-203ENST00000564236 TOM1O60784 492 aa25.85■■□□□ 1.73
CCNF-203ENST00000564236 IDI1Q13907 227 aa25.85■■□□□ 1.73
CCNF-203ENST00000564236 TXNDC2Q86VQ3 553 aa25.85■■□□□ 1.73
CCNF-203ENST00000564236 CFAP65Q6ZU64 1925 aaKnown RBP25.84■■□□□ 1.73
CCNF-203ENST00000564236 LRRC7Q96NW7 1537 aa25.83■■□□□ 1.73
CCNF-203ENST00000564236 DISP3Q9P2K9 1392 aa25.83■■□□□ 1.73
CCNF-203ENST00000564236 SLC52A1Q9NWF4 448 aa25.83■■□□□ 1.73
CCNF-203ENST00000564236 EID1Q9Y6B2 187 aa25.83■■□□□ 1.73
CCNF-203ENST00000564236 STRCP1A6NGW2 1772 aa25.82■■□□□ 1.72
CCNF-203ENST00000564236 ALKQ9UM73 1620 aa25.82■■□□□ 1.72
CCNF-203ENST00000564236 UNC13BO14795 1591 aa25.81■■□□□ 1.72
CCNF-203ENST00000564236 ADGRB3O60242 1522 aa25.79■■□□□ 1.72
CCNF-203ENST00000564236 TET3O43151 1660 aa25.79■■□□□ 1.72
CCNF-203ENST00000564236 STAG3Q9UJ98 1225 aa25.76■■□□□ 1.71
CCNF-203ENST00000564236 GCC2Q8IWJ2 1684 aa25.71■■□□□ 1.71
CCNF-203ENST00000564236 HSPA1LP34931 641 aa25.71■■□□□ 1.71
CCNF-203ENST00000564236 PIP4K2BP78356 416 aa25.71■■□□□ 1.71
CCNF-203ENST00000564236 ILDR2Q71H61 639 aa25.71■■□□□ 1.71
CCNF-203ENST00000564236 ZFYVE9O95405 1425 aa25.7■■□□□ 1.7
CCNF-203ENST00000564236 IQGAP3Q86VI3 1631 aa25.7■■□□□ 1.7
CCNF-203ENST00000564236 SCAF1Q9H7N4 1312 aaKnown RBP25.66■■□□□ 1.7
CCNF-203ENST00000564236 KCNA6P17658 529 aa25.65■■□□□ 1.7
CCNF-203ENST00000564236 TMEM131LA2VDJ0 1609 aa25.65■■□□□ 1.7
CCNF-203ENST00000564236 E9PCH4 1651 aa25.64■■□□□ 1.69
CCNF-203ENST00000564236 PLEKHG1Q9ULL1 1385 aa25.63■■□□□ 1.69
CCNF-203ENST00000564236 NWD1Q149M9 1564 aa25.63■■□□□ 1.69
CCNF-203ENST00000564236 RRBP1Q9P2E9 1410 aaKnown RBP25.63■■□□□ 1.69
CCNF-203ENST00000564236 NKTRP30414 1462 aaKnown RBP25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms