RNA–Protein interactions for RNA: ENST00000561996.1

CPT1A-207, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 4

Gene CPT1A, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-207ENST00000561996 CERKQ8TCT0 537 aa29.05■■■□□ 2.24
CPT1A-207ENST00000561996 MYO3AQ8NEV4 1616 aa29.02■■■□□ 2.24
CPT1A-207ENST00000561996 PZPP20742 1482 aa29.01■■■□□ 2.23
CPT1A-207ENST00000561996 ZNF142P52746 1687 aaPredicted RBP29.01■■■□□ 2.23
CPT1A-207ENST00000561996 CAMSAP1Q5T5Y3 1602 aa29.01■■■□□ 2.23
CPT1A-207ENST00000561996 PLA2R1Q13018 1463 aa29■■■□□ 2.23
CPT1A-207ENST00000561996 SHANK2Q9UPX8 1470 aa29■■■□□ 2.23
CPT1A-207ENST00000561996 CEP170BQ9Y4F5 1589 aaPredicted RBP29■■■□□ 2.23
CPT1A-207ENST00000561996 FGD6Q6ZV73 1430 aa28.97■■■□□ 2.23
CPT1A-207ENST00000561996 RNF17Q9BXT8 1623 aaKnown RBP28.97■■■□□ 2.23
CPT1A-207ENST00000561996 PTPN23Q9H3S7 1636 aa28.97■■■□□ 2.23
CPT1A-207ENST00000561996 EIF2AK4Q9P2K8 1649 aaKnown RBP28.97■■■□□ 2.23
CPT1A-207ENST00000561996 PKD2Q13563 968 aa28.96■■■□□ 2.23
CPT1A-207ENST00000561996 TNRQ92752 1358 aa28.96■■■□□ 2.23
CPT1A-207ENST00000561996 A2ML1A8K2U0 1454 aa28.96■■■□□ 2.23
CPT1A-207ENST00000561996 TCOF1Q13428 1488 aaKnown RBP28.96■■■□□ 2.23
CPT1A-207ENST00000561996 ABCC5O15440 1437 aa28.95■■■□□ 2.23
CPT1A-207ENST00000561996 DUOX2Q9NRD8 1548 aa28.95■■■□□ 2.23
CPT1A-207ENST00000561996 FBXO31Q5XUX0 539 aaPredicted RBP28.92■■■□□ 2.22
CPT1A-207ENST00000561996 KIF15Q9NS87 1388 aa28.91■■■□□ 2.22
CPT1A-207ENST00000561996 DAPK1P53355 1430 aa28.91■■■□□ 2.22
CPT1A-207ENST00000561996 ERBINQ96RT1 1412 aa28.89■■■□□ 2.22
CPT1A-207ENST00000561996 ZC3H13Q5T200 1668 aaKnown RBP28.89■■■□□ 2.21
CPT1A-207ENST00000561996 NCKAP5LQ9HCH0 1330 aa28.89■■■□□ 2.21
CPT1A-207ENST00000561996 ABCC3O15438 1527 aa28.89■■■□□ 2.21
CPT1A-207ENST00000561996 CROCC2H7BZ55 1655 aa28.87■■■□□ 2.21
CPT1A-207ENST00000561996 NLRP1Q9C000 1473 aa28.87■■■□□ 2.21
CPT1A-207ENST00000561996 DNMT1P26358 1616 aaKnown RBP28.87■■■□□ 2.21
CPT1A-207ENST00000561996 MROH1Q8NDA8 1641 aa28.83■■■□□ 2.21
CPT1A-207ENST00000561996 RRP7BPQ9NSQ0 103 aa28.83■■■□□ 2.21
CPT1A-207ENST00000561996 ANKRD30AQ9BXX3 1397 aa28.83■■■□□ 2.21
CPT1A-207ENST00000561996 LTBP4Q8N2S1 1624 aa28.82■■■□□ 2.2
CPT1A-207ENST00000561996 IQSEC2Q5JU85 1478 aa28.8■■■□□ 2.2
CPT1A-207ENST00000561996 THEMISQ8N1K5 641 aaPredicted RBP28.8■■■□□ 2.2
CPT1A-207ENST00000561996 SPATA31D1Q6ZQQ2 1576 aa28.79■■■□□ 2.2
CPT1A-207ENST00000561996 PRDM15P57071 1507 aaPredicted RBP28.79■■■□□ 2.2
CPT1A-207ENST00000561996 ERVK-7P63135 1459 aa28.76■■■□□ 2.19
CPT1A-207ENST00000561996 ARHGAP31Q2M1Z3 1444 aa28.76■■■□□ 2.19
CPT1A-207ENST00000561996 UGGT1Q9NYU2 1555 aa28.75■■■□□ 2.19
CPT1A-207ENST00000561996 ADGRL2O95490 1459 aa28.73■■■□□ 2.19
CPT1A-207ENST00000561996 ANKLE2Q86XL3 938 aa28.73■■■□□ 2.19
CPT1A-207ENST00000561996 CHIC2Q9UKJ5 165 aa28.73■■■□□ 2.19
CPT1A-207ENST00000561996 KANK1Q14678 1352 aa28.73■■■□□ 2.19
CPT1A-207ENST00000561996 FAM50AQ14320 339 aaKnown RBP28.71■■■□□ 2.19
CPT1A-207ENST00000561996 DEPDC5O75140 1603 aa28.71■■■□□ 2.19
CPT1A-207ENST00000561996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.71■■■□□ 2.19
CPT1A-207ENST00000561996 ZNF335Q9H4Z2 1342 aaPredicted RBP28.7■■■□□ 2.19
CPT1A-207ENST00000561996 CEP152O94986 1710 aa28.69■■■□□ 2.18
CPT1A-207ENST00000561996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.67■■■□□ 2.183e-6■□□□□ 9.4
CPT1A-207ENST00000561996 POLR1AO95602 1720 aaPredicted RBP28.66■■■□□ 2.18
CPT1A-207ENST00000561996 NEURL4Q96JN8 1562 aa28.66■■■□□ 2.18
CPT1A-207ENST00000561996 LMTK2Q8IWU2 1503 aa28.65■■■□□ 2.18
CPT1A-207ENST00000561996 MED14O60244 1454 aa28.65■■■□□ 2.18
CPT1A-207ENST00000561996 VWDEQ8N2E2 1590 aa28.62■■■□□ 2.17
CPT1A-207ENST00000561996 NPHP4O75161 1426 aaPredicted RBP28.6■■■□□ 2.17
CPT1A-207ENST00000561996 ANKRD50Q9ULJ7 1429 aa28.6■■■□□ 2.17
CPT1A-207ENST00000561996 CPS1P31327 1500 aa28.56■■■□□ 2.16
CPT1A-207ENST00000561996 ROCK1Q13464 1354 aa28.54■■■□□ 2.16
CPT1A-207ENST00000561996 UBR1Q8IWV7 1749 aa28.53■■■□□ 2.16
CPT1A-207ENST00000561996 CFAP65Q6ZU64 1925 aaKnown RBP28.51■■■□□ 2.16
CPT1A-207ENST00000561996 SLIT1O75093 1534 aa28.51■■■□□ 2.15
CPT1A-207ENST00000561996 EFCAB6Q5THR3 1501 aa28.51■■■□□ 2.15
CPT1A-207ENST00000561996 ARHGAP23Q9P227 1491 aa28.51■■■□□ 2.15
CPT1A-207ENST00000561996 IQGAP1P46940 1657 aa28.49■■■□□ 2.15
CPT1A-207ENST00000561996 SCAF11Q99590 1463 aaKnown RBP28.49■■■□□ 2.15
CPT1A-207ENST00000561996 NOS1P29475 1434 aa28.49■■■□□ 2.15
CPT1A-207ENST00000561996 RPRD2Q5VT52 1461 aaKnown RBP28.48■■■□□ 2.15
CPT1A-207ENST00000561996 UBAP1LF5GYI3 381 aa28.48■■■□□ 2.15
CPT1A-207ENST00000561996 EID1Q9Y6B2 187 aa28.47■■■□□ 2.15
CPT1A-207ENST00000561996 STAG3Q9UJ98 1225 aa28.46■■■□□ 2.15
CPT1A-207ENST00000561996 IDI1Q13907 227 aa28.45■■■□□ 2.14
CPT1A-207ENST00000561996 TXNDC2Q86VQ3 553 aa28.45■■■□□ 2.14
CPT1A-207ENST00000561996 SLC52A1Q9NWF4 448 aa28.45■■■□□ 2.14
CPT1A-207ENST00000561996 KDM5AP29375 1690 aaKnown RBP28.45■■■□□ 2.14
CPT1A-207ENST00000561996 TMEM2Q9UHN6 1383 aa28.44■■■□□ 2.14
CPT1A-207ENST00000561996 PIK3C2BO00750 1634 aa28.43■■■□□ 2.14
CPT1A-207ENST00000561996 LTKP29376 864 aa28.42■■■□□ 2.14
CPT1A-207ENST00000561996 SYNMO15061 1565 aa28.41■■■□□ 2.14
CPT1A-207ENST00000561996 UNC13BO14795 1591 aa28.4■■■□□ 2.14
CPT1A-207ENST00000561996 TET3O43151 1660 aa28.38■■■□□ 2.13
CPT1A-207ENST00000561996 TOM1O60784 492 aa28.38■■■□□ 2.13
CPT1A-207ENST00000561996 PPARGC1BQ86YN6 1023 aaKnown RBP28.36■■■□□ 2.13
CPT1A-207ENST00000561996 ADGRB3O60242 1522 aa28.34■■■□□ 2.13
CPT1A-207ENST00000561996 ITGAEP38570 1179 aa28.32■■■□□ 2.12
CPT1A-207ENST00000561996 RRBP1Q9P2E9 1410 aaKnown RBP28.31■■■□□ 2.12
CPT1A-207ENST00000561996 GCC2Q8IWJ2 1684 aa28.31■■■□□ 2.12
CPT1A-207ENST00000561996 LRRC7Q96NW7 1537 aa28.3■■■□□ 2.12
CPT1A-207ENST00000561996 IQGAP3Q86VI3 1631 aa28.29■■■□□ 2.12
CPT1A-207ENST00000561996 NUP155O75694 1391 aa28.28■■■□□ 2.12
CPT1A-207ENST00000561996 HDGFP51858 240 aaKnown RBP28.26■■■□□ 2.11
CPT1A-207ENST00000561996 STRCP1A6NGW2 1772 aa28.24■■■□□ 2.11
CPT1A-207ENST00000561996 PIP4K2BP78356 416 aa28.22■■■□□ 2.11
CPT1A-207ENST00000561996 DISP3Q9P2K9 1392 aa28.22■■■□□ 2.11
CPT1A-207ENST00000561996 SCAF1Q9H7N4 1312 aaKnown RBP28.21■■■□□ 2.11
CPT1A-207ENST00000561996 E9PCH4 1651 aa28.2■■■□□ 2.11
CPT1A-207ENST00000561996 ZFYVE9O95405 1425 aa28.2■■■□□ 2.11
CPT1A-207ENST00000561996 KCNA6P17658 529 aa28.19■■■□□ 2.1
CPT1A-207ENST00000561996 TMEM131LA2VDJ0 1609 aa28.18■■■□□ 2.1
CPT1A-207ENST00000561996 PLEKHG1Q9ULL1 1385 aa28.17■■■□□ 2.1
CPT1A-207ENST00000561996 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms