RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 DNMT1P26358 1616 aaKnown RBP23.24■■□□□ 1.31
SPG7-205ENST00000561945 A2ML1A8K2U0 1454 aa23.24■■□□□ 1.31
SPG7-205ENST00000561945 PKD2Q13563 968 aa23.23■■□□□ 1.31
SPG7-205ENST00000561945 PZPP20742 1482 aa23.22■■□□□ 1.31
SPG7-205ENST00000561945 RNF17Q9BXT8 1623 aaKnown RBP23.19■■□□□ 1.3
SPG7-205ENST00000561945 NCKAP5LQ9HCH0 1330 aa23.19■■□□□ 1.3
SPG7-205ENST00000561945 KIF3BO15066 747 aa23.18■■□□□ 1.3
SPG7-205ENST00000561945 MIA2Q96PC5 1412 aa23.17■■□□□ 1.3
SPG7-205ENST00000561945 EIF2AK4Q9P2K8 1649 aaKnown RBP23.17■■□□□ 1.3
SPG7-205ENST00000561945 POLR1AO95602 1720 aaPredicted RBP23.16■■□□□ 1.3
SPG7-205ENST00000561945 ZC3H13Q5T200 1668 aaKnown RBP23.16■■□□□ 1.3
SPG7-205ENST00000561945 LOC105371045A0A1W2PR82 267 aa23.14■■□□□ 1.29
SPG7-205ENST00000561945 TSPY4P0CV99 314 aa23.14■■□□□ 1.29
SPG7-205ENST00000561945 TSPY10P0CW01 314 aa23.14■■□□□ 1.29
SPG7-205ENST00000561945 NEURL4Q96JN8 1562 aa23.14■■□□□ 1.29
SPG7-205ENST00000561945 TNRQ92752 1358 aa23.14■■□□□ 1.29
SPG7-205ENST00000561945 MYOM3Q5VTT5 1437 aa23.13■■□□□ 1.29
SPG7-205ENST00000561945 ZNF335Q9H4Z2 1342 aaPredicted RBP23.11■■□□□ 1.29
SPG7-205ENST00000561945 KANK4Q5T7N3 995 aaPredicted RBP23.11■■□□□ 1.29
SPG7-205ENST00000561945 FBXO31Q5XUX0 539 aaPredicted RBP23.11■■□□□ 1.29
SPG7-205ENST00000561945 ILDR2Q71H61 639 aa23.11■■□□□ 1.29
SPG7-205ENST00000561945 MROH1Q8NDA8 1641 aa23.11■■□□□ 1.29
SPG7-205ENST00000561945 NLRP1Q9C000 1473 aa23.11■■□□□ 1.29
SPG7-205ENST00000561945 WASHC2CQ9Y4E1 1318 aa23.1■■□□□ 1.29
SPG7-205ENST00000561945 ABCC3O15438 1527 aa23.09■■□□□ 1.29
SPG7-205ENST00000561945 SPATA31D1Q6ZQQ2 1576 aa23.08■■□□□ 1.29
SPG7-205ENST00000561945 DEPDC5O75140 1603 aa23.07■■□□□ 1.28
SPG7-205ENST00000561945 CROCC2H7BZ55 1655 aa23.06■■□□□ 1.28
SPG7-205ENST00000561945 UGGT1Q9NYU2 1555 aa23.05■■□□□ 1.28
SPG7-205ENST00000561945 MED14O60244 1454 aa23.05■■□□□ 1.28
SPG7-205ENST00000561945 DUOX2Q9NRD8 1548 aa23.04■■□□□ 1.28
SPG7-205ENST00000561945 SHANK2Q9UPX8 1470 aa23.04■■□□□ 1.28
SPG7-205ENST00000561945 CPS1P31327 1500 aa23.02■■□□□ 1.28
SPG7-205ENST00000561945 PRDM15P57071 1507 aaPredicted RBP23■■□□□ 1.27
SPG7-205ENST00000561945 THEMISQ8N1K5 641 aaPredicted RBP23■■□□□ 1.27
SPG7-205ENST00000561945 CEP152O94986 1710 aa22.99■■□□□ 1.27
SPG7-205ENST00000561945 ERVK-7P63135 1459 aa22.99■■□□□ 1.27
SPG7-205ENST00000561945 VWDEQ8N2E2 1590 aa22.99■■□□□ 1.27
SPG7-205ENST00000561945 PTPN23Q9H3S7 1636 aa22.99■■□□□ 1.27
SPG7-205ENST00000561945 DISP3Q9P2K9 1392 aa22.99■■□□□ 1.27
SPG7-205ENST00000561945 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.98■■□□□ 1.276e-7■■■■□ 24.4
SPG7-205ENST00000561945 ABCC5O15440 1437 aa22.98■■□□□ 1.27
SPG7-205ENST00000561945 ERBINQ96RT1 1412 aa22.97■■□□□ 1.27
SPG7-205ENST00000561945 ANKLE2Q86XL3 938 aa22.96■■□□□ 1.27
SPG7-205ENST00000561945 ARHGAP31Q2M1Z3 1444 aa22.96■■□□□ 1.27
SPG7-205ENST00000561945 IQGAP1P46940 1657 aa22.95■■□□□ 1.26
SPG7-205ENST00000561945 UBR1Q8IWV7 1749 aa22.95■■□□□ 1.26
SPG7-205ENST00000561945 NPHP4O75161 1426 aaPredicted RBP22.94■■□□□ 1.26
SPG7-205ENST00000561945 DAPK1P53355 1430 aa22.92■■□□□ 1.26
SPG7-205ENST00000561945 KIF15Q9NS87 1388 aa22.92■■□□□ 1.26
SPG7-205ENST00000561945 UBAP1LF5GYI3 381 aa22.92■■□□□ 1.26
SPG7-205ENST00000561945 FGD6Q6ZV73 1430 aa22.91■■□□□ 1.26
SPG7-205ENST00000561945 SLIT1O75093 1534 aa22.87■■□□□ 1.25
SPG7-205ENST00000561945 ARHGAP23Q9P227 1491 aa22.87■■□□□ 1.25
SPG7-205ENST00000561945 STRCP1A6NGW2 1772 aa22.87■■□□□ 1.25
SPG7-205ENST00000561945 LMTK2Q8IWU2 1503 aa22.87■■□□□ 1.25
SPG7-205ENST00000561945 KDM5AP29375 1690 aaKnown RBP22.86■■□□□ 1.25
SPG7-205ENST00000561945 CFAP65Q6ZU64 1925 aaKnown RBP22.86■■□□□ 1.25
SPG7-205ENST00000561945 ALKQ9UM73 1620 aa22.86■■□□□ 1.25
SPG7-205ENST00000561945 SYNMO15061 1565 aa22.84■■□□□ 1.25
SPG7-205ENST00000561945 APLP2Q06481 763 aa22.84■■□□□ 1.25
SPG7-205ENST00000561945 RRP7BPQ9NSQ0 103 aa22.82■■□□□ 1.24
SPG7-205ENST00000561945 ADGRL2O95490 1459 aa22.81■■□□□ 1.24
SPG7-205ENST00000561945 SCAF11Q99590 1463 aaKnown RBP22.81■■□□□ 1.24
SPG7-205ENST00000561945 ANKRD30AQ9BXX3 1397 aa22.8■■□□□ 1.24
SPG7-205ENST00000561945 PIK3C2BO00750 1634 aa22.8■■□□□ 1.24
SPG7-205ENST00000561945 TOM1O60784 492 aa22.8■■□□□ 1.24
SPG7-205ENST00000561945 LRRC7Q96NW7 1537 aa22.79■■□□□ 1.24
SPG7-205ENST00000561945 SOCS7O14512 581 aa22.78■■□□□ 1.24
SPG7-205ENST00000561945 KANK1Q14678 1352 aa22.76■■□□□ 1.23
SPG7-205ENST00000561945 EFCAB6Q5THR3 1501 aa22.75■■□□□ 1.23
SPG7-205ENST00000561945 LTKP29376 864 aa22.74■■□□□ 1.23
SPG7-205ENST00000561945 NOS1P29475 1434 aa22.73■■□□□ 1.23
SPG7-205ENST00000561945 HSPA1LP34931 641 aa22.72■■□□□ 1.23
SPG7-205ENST00000561945 TMEM2Q9UHN6 1383 aa22.72■■□□□ 1.23
SPG7-205ENST00000561945 XIRP1Q702N8 1843 aaKnown RBP22.71■■□□□ 1.23
SPG7-205ENST00000561945 TXNDC2Q86VQ3 553 aa22.69■■□□□ 1.22
SPG7-205ENST00000561945 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.69■■□□□ 1.226e-10■■■□□ 19.1
SPG7-205ENST00000561945 MED1Q15648 1581 aaPredicted RBP22.68■■□□□ 1.22
SPG7-205ENST00000561945 RPRD2Q5VT52 1461 aaKnown RBP22.68■■□□□ 1.22
SPG7-205ENST00000561945 PIP4K2BP78356 416 aa22.68■■□□□ 1.22
SPG7-205ENST00000561945 CHIC2Q9UKJ5 165 aa22.68■■□□□ 1.22
SPG7-205ENST00000561945 TET3O43151 1660 aa22.68■■□□□ 1.22
SPG7-205ENST00000561945 ADGRB3O60242 1522 aa22.67■■□□□ 1.22
SPG7-205ENST00000561945 IDI1Q13907 227 aa22.66■■□□□ 1.22
SPG7-205ENST00000561945 EID1Q9Y6B2 187 aa22.65■■□□□ 1.22
SPG7-205ENST00000561945 ANKRD50Q9ULJ7 1429 aa22.65■■□□□ 1.22
SPG7-205ENST00000561945 SCAF1Q9H7N4 1312 aaKnown RBP22.63■■□□□ 1.21
SPG7-205ENST00000561945 UNC13BO14795 1591 aa22.63■■□□□ 1.21
SPG7-205ENST00000561945 GCC2Q8IWJ2 1684 aa22.62■■□□□ 1.21
SPG7-205ENST00000561945 SLC52A1Q9NWF4 448 aa22.61■■□□□ 1.21
SPG7-205ENST00000561945 NWD1Q149M9 1564 aa22.59■■□□□ 1.21
SPG7-205ENST00000561945 FAM50AQ14320 339 aaKnown RBP22.57■■□□□ 1.2
SPG7-205ENST00000561945 STAG3Q9UJ98 1225 aa22.57■■□□□ 1.2
SPG7-205ENST00000561945 ROCK1Q13464 1354 aa22.57■■□□□ 1.2
SPG7-205ENST00000561945 TMEM131LA2VDJ0 1609 aa22.56■■□□□ 1.2
SPG7-205ENST00000561945 ZFYVE9O95405 1425 aa22.56■■□□□ 1.2
SPG7-205ENST00000561945 MYO5BQ9ULV0 1848 aa22.55■■□□□ 1.2
SPG7-205ENST00000561945 KCNA6P17658 529 aa22.54■■□□□ 1.2
SPG7-205ENST00000561945 NKTRP30414 1462 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms