RNA–Protein interactions for RNA: ENST00000561278.1

SHF-211, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-211ENST00000561278 MAST1Q9Y2H9 1570 aa19.59■□□□□ 0.73
SHF-211ENST00000561278 ZNF142P52746 1687 aaPredicted RBP19.59■□□□□ 0.73
SHF-211ENST00000561278 NCOA1Q15788 1441 aa19.58■□□□□ 0.72
SHF-211ENST00000561278 CEP170BQ9Y4F5 1589 aaPredicted RBP19.57■□□□□ 0.72
SHF-211ENST00000561278 CERKQ8TCT0 537 aa19.57■□□□□ 0.72
SHF-211ENST00000561278 FAM135AQ9P2D6 1515 aa19.56■□□□□ 0.72
SHF-211ENST00000561278 WASHC2CQ9Y4E1 1318 aa19.56■□□□□ 0.72
SHF-211ENST00000561278 PTPN23Q9H3S7 1636 aa19.55■□□□□ 0.72
SHF-211ENST00000561278 PTPRTO14522 1441 aa19.55■□□□□ 0.72
SHF-211ENST00000561278 PZPP20742 1482 aa19.53■□□□□ 0.72
SHF-211ENST00000561278 CROCC2H7BZ55 1655 aa19.52■□□□□ 0.72
SHF-211ENST00000561278 EIF2AK4Q9P2K8 1649 aaKnown RBP19.52■□□□□ 0.72
SHF-211ENST00000561278 FGD6Q6ZV73 1430 aa19.51■□□□□ 0.71
SHF-211ENST00000561278 RNF17Q9BXT8 1623 aaKnown RBP19.51■□□□□ 0.71
SHF-211ENST00000561278 A2ML1A8K2U0 1454 aa19.5■□□□□ 0.71
SHF-211ENST00000561278 TNRQ92752 1358 aa19.5■□□□□ 0.71
SHF-211ENST00000561278 FBXO31Q5XUX0 539 aaPredicted RBP19.5■□□□□ 0.71
SHF-211ENST00000561278 NCKAP5LQ9HCH0 1330 aa19.5■□□□□ 0.71
SHF-211ENST00000561278 PLA2R1Q13018 1463 aa19.49■□□□□ 0.71
SHF-211ENST00000561278 SHANK2Q9UPX8 1470 aa19.49■□□□□ 0.71
SHF-211ENST00000561278 DUOX2Q9NRD8 1548 aa19.49■□□□□ 0.71
SHF-211ENST00000561278 ZC3H13Q5T200 1668 aaKnown RBP19.49■□□□□ 0.71
SHF-211ENST00000561278 KIF15Q9NS87 1388 aa19.48■□□□□ 0.71
SHF-211ENST00000561278 ABCC5O15440 1437 aa19.48■□□□□ 0.71
SHF-211ENST00000561278 DNMT1P26358 1616 aaKnown RBP19.47■□□□□ 0.71
SHF-211ENST00000561278 ABCC3O15438 1527 aa19.47■□□□□ 0.71
SHF-211ENST00000561278 DAPK1P53355 1430 aa19.47■□□□□ 0.71
SHF-211ENST00000561278 TCOF1Q13428 1488 aaKnown RBP19.46■□□□□ 0.71
SHF-211ENST00000561278 PKD2Q13563 968 aa19.45■□□□□ 0.7
SHF-211ENST00000561278 RRP7BPQ9NSQ0 103 aa19.45■□□□□ 0.7
SHF-211ENST00000561278 MROH1Q8NDA8 1641 aa19.44■□□□□ 0.7
SHF-211ENST00000561278 ERBINQ96RT1 1412 aa19.43■□□□□ 0.7
SHF-211ENST00000561278 CEP152O94986 1710 aa19.43■□□□□ 0.7
SHF-211ENST00000561278 LTBP4Q8N2S1 1624 aa19.41■□□□□ 0.7
SHF-211ENST00000561278 CHIC2Q9UKJ5 165 aa19.41■□□□□ 0.7
SHF-211ENST00000561278 NLRP1Q9C000 1473 aa19.41■□□□□ 0.7
SHF-211ENST00000561278 FAM50AQ14320 339 aaKnown RBP19.4■□□□□ 0.7
SHF-211ENST00000561278 PRDM15P57071 1507 aaPredicted RBP19.4■□□□□ 0.7
SHF-211ENST00000561278 UGGT1Q9NYU2 1555 aa19.4■□□□□ 0.7
SHF-211ENST00000561278 POLR1AO95602 1720 aaPredicted RBP19.39■□□□□ 0.7
SHF-211ENST00000561278 ZNF335Q9H4Z2 1342 aaPredicted RBP19.39■□□□□ 0.69
SHF-211ENST00000561278 ANKRD30AQ9BXX3 1397 aa19.39■□□□□ 0.69
SHF-211ENST00000561278 ERVK-7P63135 1459 aa19.38■□□□□ 0.69
SHF-211ENST00000561278 SPATA31D1Q6ZQQ2 1576 aa19.38■□□□□ 0.69
SHF-211ENST00000561278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.38■□□□□ 0.69
SHF-211ENST00000561278 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.37■□□□□ 0.69
SHF-211ENST00000561278 KANK1Q14678 1352 aa19.35■□□□□ 0.69
SHF-211ENST00000561278 DEPDC5O75140 1603 aa19.34■□□□□ 0.69
SHF-211ENST00000561278 THEMISQ8N1K5 641 aaPredicted RBP19.34■□□□□ 0.69
SHF-211ENST00000561278 NEURL4Q96JN8 1562 aa19.34■□□□□ 0.69
SHF-211ENST00000561278 ANKLE2Q86XL3 938 aa19.33■□□□□ 0.68
SHF-211ENST00000561278 IQSEC2Q5JU85 1478 aa19.33■□□□□ 0.68
SHF-211ENST00000561278 ADGRL2O95490 1459 aa19.3■□□□□ 0.68
SHF-211ENST00000561278 ARHGAP31Q2M1Z3 1444 aa19.28■□□□□ 0.68
SHF-211ENST00000561278 NPHP4O75161 1426 aaPredicted RBP19.27■□□□□ 0.68
SHF-211ENST00000561278 CFAP65Q6ZU64 1925 aaKnown RBP19.27■□□□□ 0.67
SHF-211ENST00000561278 UBR1Q8IWV7 1749 aa19.26■□□□□ 0.67
SHF-211ENST00000561278 IQGAP1P46940 1657 aa19.26■□□□□ 0.67
SHF-211ENST00000561278 PPARGC1BQ86YN6 1023 aaKnown RBP19.25■□□□□ 0.67
SHF-211ENST00000561278 LMTK2Q8IWU2 1503 aa19.25■□□□□ 0.67
SHF-211ENST00000561278 ANKRD50Q9ULJ7 1429 aa19.25■□□□□ 0.67
SHF-211ENST00000561278 VWDEQ8N2E2 1590 aa19.23■□□□□ 0.67
SHF-211ENST00000561278 MED14O60244 1454 aa19.23■□□□□ 0.67
SHF-211ENST00000561278 UBAP1LF5GYI3 381 aa19.23■□□□□ 0.67
SHF-211ENST00000561278 CPS1P31327 1500 aa19.23■□□□□ 0.67
SHF-211ENST00000561278 EFCAB6Q5THR3 1501 aa19.23■□□□□ 0.67
SHF-211ENST00000561278 STAG3Q9UJ98 1225 aa19.22■□□□□ 0.67
SHF-211ENST00000561278 PIK3C2BO00750 1634 aa19.22■□□□□ 0.67
SHF-211ENST00000561278 SCAF11Q99590 1463 aaKnown RBP19.2■□□□□ 0.66
SHF-211ENST00000561278 ITGAEP38570 1179 aa19.19■□□□□ 0.66
SHF-211ENST00000561278 SYNMO15061 1565 aa19.18■□□□□ 0.66
SHF-211ENST00000561278 SLIT1O75093 1534 aa19.17■□□□□ 0.66
SHF-211ENST00000561278 SCAF1Q9H7N4 1312 aaKnown RBP19.17■□□□□ 0.66
SHF-211ENST00000561278 MSH5O43196 834 aa19.16■□□□□ 0.66
SHF-211ENST00000561278 TXNDC2Q86VQ3 553 aa19.16■□□□□ 0.66
SHF-211ENST00000561278 EID1Q9Y6B2 187 aa19.16■□□□□ 0.66
SHF-211ENST00000561278 ARHGAP23Q9P227 1491 aa19.16■□□□□ 0.66
SHF-211ENST00000561278 UNC13BO14795 1591 aa19.15■□□□□ 0.66
SHF-211ENST00000561278 LTKP29376 864 aa19.14■□□□□ 0.65
SHF-211ENST00000561278 ROCK1Q13464 1354 aa19.14■□□□□ 0.65
SHF-211ENST00000561278 TET3O43151 1660 aa19.14■□□□□ 0.65
SHF-211ENST00000561278 IDI1Q13907 227 aa19.13■□□□□ 0.65
SHF-211ENST00000561278 TMEM2Q9UHN6 1383 aa19.13■□□□□ 0.65
SHF-211ENST00000561278 NOS1P29475 1434 aa19.13■□□□□ 0.65
SHF-211ENST00000561278 RPRD2Q5VT52 1461 aaKnown RBP19.13■□□□□ 0.65
SHF-211ENST00000561278 ADGRB3O60242 1522 aa19.13■□□□□ 0.65
SHF-211ENST00000561278 KDM5AP29375 1690 aaKnown RBP19.12■□□□□ 0.65
SHF-211ENST00000561278 PIP4K2BP78356 416 aa19.11■□□□□ 0.65
SHF-211ENST00000561278 GCC2Q8IWJ2 1684 aa19.11■□□□□ 0.65
SHF-211ENST00000561278 DISP3Q9P2K9 1392 aa19.1■□□□□ 0.65
SHF-211ENST00000561278 TOM1O60784 492 aa19.1■□□□□ 0.65
SHF-211ENST00000561278 POTEDQ86YR6 584 aa19.1■□□□□ 0.65
SHF-211ENST00000561278 STRCP1A6NGW2 1772 aa19.09■□□□□ 0.65
SHF-211ENST00000561278 SLC52A1Q9NWF4 448 aa19.08■□□□□ 0.64
SHF-211ENST00000561278 LRRC7Q96NW7 1537 aa19.07■□□□□ 0.64
SHF-211ENST00000561278 IQGAP3Q86VI3 1631 aa19.07■□□□□ 0.64
SHF-211ENST00000561278 E9PCH4 1651 aa19.05■□□□□ 0.64
SHF-211ENST00000561278 NUP155O75694 1391 aa19.05■□□□□ 0.64
SHF-211ENST00000561278 BCANQ96GW7 911 aa19.04■□□□□ 0.64
SHF-211ENST00000561278 CHGAP10645 457 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms