RNA–Protein interactions for RNA: ENST00000560309.5

ETFA-213, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-213ENST00000560309 KDM5DQ9BY66 1539 aa32.27■■■□□ 2.76
ETFA-213ENST00000560309 CAMSAP1Q5T5Y3 1602 aa32.27■■■□□ 2.76
ETFA-213ENST00000560309 PKD2Q13563 968 aa32.27■■■□□ 2.76
ETFA-213ENST00000560309 ZNF142P52746 1687 aaPredicted RBP32.25■■■□□ 2.75
ETFA-213ENST00000560309 MYO3AQ8NEV4 1616 aa32.25■■■□□ 2.75
ETFA-213ENST00000560309 PLA2R1Q13018 1463 aa32.24■■■□□ 2.75
ETFA-213ENST00000560309 CEP170BQ9Y4F5 1589 aaPredicted RBP32.24■■■□□ 2.75
ETFA-213ENST00000560309 PZPP20742 1482 aa32.22■■■□□ 2.75
ETFA-213ENST00000560309 A2ML1A8K2U0 1454 aa32.2■■■□□ 2.75
ETFA-213ENST00000560309 TNRQ92752 1358 aa32.19■■■□□ 2.74
ETFA-213ENST00000560309 EIF2AK4Q9P2K8 1649 aaKnown RBP32.18■■■□□ 2.74
ETFA-213ENST00000560309 FBXO31Q5XUX0 539 aaPredicted RBP32.16■■■□□ 2.74
ETFA-213ENST00000560309 NCKAP5LQ9HCH0 1330 aa32.16■■■□□ 2.74
ETFA-213ENST00000560309 DUOX2Q9NRD8 1548 aa32.16■■■□□ 2.74
ETFA-213ENST00000560309 RNF17Q9BXT8 1623 aaKnown RBP32.15■■■□□ 2.74
ETFA-213ENST00000560309 SHANK2Q9UPX8 1470 aa32.15■■■□□ 2.74
ETFA-213ENST00000560309 PTPN23Q9H3S7 1636 aa32.15■■■□□ 2.74
ETFA-213ENST00000560309 TCOF1Q13428 1488 aaKnown RBP32.13■■■□□ 2.73
ETFA-213ENST00000560309 ABCC5O15440 1437 aa32.11■■■□□ 2.73
ETFA-213ENST00000560309 FGD6Q6ZV73 1430 aa32.11■■■□□ 2.73
ETFA-213ENST00000560309 ZC3H13Q5T200 1668 aaKnown RBP32.11■■■□□ 2.73
ETFA-213ENST00000560309 DNMT1P26358 1616 aaKnown RBP32.1■■■□□ 2.73
ETFA-213ENST00000560309 THEMISQ8N1K5 641 aaPredicted RBP32.09■■■□□ 2.73
ETFA-213ENST00000560309 NLRP1Q9C000 1473 aa32.09■■■□□ 2.73
ETFA-213ENST00000560309 IQSEC2Q5JU85 1478 aa32.08■■■□□ 2.73
ETFA-213ENST00000560309 KIF15Q9NS87 1388 aa32.07■■■□□ 2.73
ETFA-213ENST00000560309 LTBP4Q8N2S1 1624 aa32.07■■■□□ 2.72
ETFA-213ENST00000560309 DAPK1P53355 1430 aa32.06■■■□□ 2.72
ETFA-213ENST00000560309 ERBINQ96RT1 1412 aa32.06■■■□□ 2.72
ETFA-213ENST00000560309 ABCC3O15438 1527 aa32.05■■■□□ 2.72
ETFA-213ENST00000560309 CROCC2H7BZ55 1655 aa32.03■■■□□ 2.72
ETFA-213ENST00000560309 RRP7BPQ9NSQ0 103 aa32.03■■■□□ 2.72
ETFA-213ENST00000560309 ANKLE2Q86XL3 938 aa32.01■■■□□ 2.71
ETFA-213ENST00000560309 ANKRD30AQ9BXX3 1397 aa32.01■■■□□ 2.71
ETFA-213ENST00000560309 MROH1Q8NDA8 1641 aa31.97■■■□□ 2.71
ETFA-213ENST00000560309 SPATA31D1Q6ZQQ2 1576 aa31.97■■■□□ 2.71
ETFA-213ENST00000560309 UGGT1Q9NYU2 1555 aa31.96■■■□□ 2.71
ETFA-213ENST00000560309 KANK1Q14678 1352 aa31.94■■■□□ 2.7
ETFA-213ENST00000560309 ARHGAP31Q2M1Z3 1444 aa31.94■■■□□ 2.7
ETFA-213ENST00000560309 ZNF335Q9H4Z2 1342 aaPredicted RBP31.94■■■□□ 2.7
ETFA-213ENST00000560309 ERVK-7P63135 1459 aa31.92■■■□□ 2.7
ETFA-213ENST00000560309 PRDM15P57071 1507 aaPredicted RBP31.92■■■□□ 2.7
ETFA-213ENST00000560309 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.92■■■□□ 2.79e-9■■□□□ 14.3
ETFA-213ENST00000560309 CHIC2Q9UKJ5 165 aa31.91■■■□□ 2.7
ETFA-213ENST00000560309 POLR1AO95602 1720 aaPredicted RBP31.91■■■□□ 2.7
ETFA-213ENST00000560309 CEP152O94986 1710 aa31.89■■■□□ 2.69
ETFA-213ENST00000560309 FAM50AQ14320 339 aaKnown RBP31.88■■■□□ 2.69
ETFA-213ENST00000560309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.87■■■□□ 2.69
ETFA-213ENST00000560309 DEPDC5O75140 1603 aa31.86■■■□□ 2.69
ETFA-213ENST00000560309 MED14O60244 1454 aa31.86■■■□□ 2.69
ETFA-213ENST00000560309 ADGRL2O95490 1459 aa31.85■■■□□ 2.69
ETFA-213ENST00000560309 CFAP65Q6ZU64 1925 aaKnown RBP31.85■■■□□ 2.69
ETFA-213ENST00000560309 NEURL4Q96JN8 1562 aa31.84■■■□□ 2.69
ETFA-213ENST00000560309 NPHP4O75161 1426 aaPredicted RBP31.81■■■□□ 2.68
ETFA-213ENST00000560309 LMTK2Q8IWU2 1503 aa31.8■■■□□ 2.68
ETFA-213ENST00000560309 CPS1P31327 1500 aa31.79■■■□□ 2.68
ETFA-213ENST00000560309 UBAP1LF5GYI3 381 aa31.75■■■□□ 2.67
ETFA-213ENST00000560309 VWDEQ8N2E2 1590 aa31.75■■■□□ 2.67
ETFA-213ENST00000560309 ANKRD50Q9ULJ7 1429 aa31.74■■■□□ 2.67
ETFA-213ENST00000560309 UBR1Q8IWV7 1749 aa31.73■■■□□ 2.67
ETFA-213ENST00000560309 IQGAP1P46940 1657 aa31.7■■■□□ 2.67
ETFA-213ENST00000560309 EID1Q9Y6B2 187 aa31.7■■■□□ 2.67
ETFA-213ENST00000560309 STAG3Q9UJ98 1225 aa31.69■■■□□ 2.66
ETFA-213ENST00000560309 TXNDC2Q86VQ3 553 aa31.68■■■□□ 2.66
ETFA-213ENST00000560309 SLIT1O75093 1534 aa31.68■■■□□ 2.66
ETFA-213ENST00000560309 ARHGAP23Q9P227 1491 aa31.67■■■□□ 2.66
ETFA-213ENST00000560309 SCAF11Q99590 1463 aaKnown RBP31.66■■■□□ 2.66
ETFA-213ENST00000560309 TOM1O60784 492 aa31.66■■■□□ 2.66
ETFA-213ENST00000560309 SLC52A1Q9NWF4 448 aa31.66■■■□□ 2.66
ETFA-213ENST00000560309 ROCK1Q13464 1354 aa31.66■■■□□ 2.66
ETFA-213ENST00000560309 KDM5AP29375 1690 aaKnown RBP31.64■■■□□ 2.66
ETFA-213ENST00000560309 IDI1Q13907 227 aa31.64■■■□□ 2.66
ETFA-213ENST00000560309 RPRD2Q5VT52 1461 aaKnown RBP31.63■■■□□ 2.65
ETFA-213ENST00000560309 EFCAB6Q5THR3 1501 aa31.63■■■□□ 2.65
ETFA-213ENST00000560309 NOS1P29475 1434 aa31.62■■■□□ 2.65
ETFA-213ENST00000560309 TMEM2Q9UHN6 1383 aa31.61■■■□□ 2.65
ETFA-213ENST00000560309 LTKP29376 864 aa31.61■■■□□ 2.65
ETFA-213ENST00000560309 PIK3C2BO00750 1634 aa31.6■■■□□ 2.65
ETFA-213ENST00000560309 SYNMO15061 1565 aa31.52■■■□□ 2.64
ETFA-213ENST00000560309 TET3O43151 1660 aa31.52■■■□□ 2.64
ETFA-213ENST00000560309 HDGFP51858 240 aaKnown RBP31.51■■■□□ 2.63
ETFA-213ENST00000560309 DISP3Q9P2K9 1392 aa31.5■■■□□ 2.63
ETFA-213ENST00000560309 UNC13BO14795 1591 aa31.5■■■□□ 2.63
ETFA-213ENST00000560309 LRRC7Q96NW7 1537 aa31.47■■■□□ 2.63
ETFA-213ENST00000560309 GCC2Q8IWJ2 1684 aa31.46■■■□□ 2.63
ETFA-213ENST00000560309 SCAF1Q9H7N4 1312 aaKnown RBP31.46■■■□□ 2.63
ETFA-213ENST00000560309 ADGRB3O60242 1522 aa31.45■■■□□ 2.63
ETFA-213ENST00000560309 ITGAEP38570 1179 aa31.45■■■□□ 2.63
ETFA-213ENST00000560309 PIP4K2BP78356 416 aa31.45■■■□□ 2.63
ETFA-213ENST00000560309 PPARGC1BQ86YN6 1023 aaKnown RBP31.44■■■□□ 2.62
ETFA-213ENST00000560309 STRCP1A6NGW2 1772 aa31.43■■■□□ 2.62
ETFA-213ENST00000560309 NUP155O75694 1391 aa31.41■■■□□ 2.62
ETFA-213ENST00000560309 IQGAP3Q86VI3 1631 aa31.38■■■□□ 2.61
ETFA-213ENST00000560309 KCNA6P17658 529 aa31.38■■■□□ 2.61
ETFA-213ENST00000560309 HSPA1LP34931 641 aa31.36■■■□□ 2.61
ETFA-213ENST00000560309 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.36■■■□□ 2.61
ETFA-213ENST00000560309 RRBP1Q9P2E9 1410 aaKnown RBP31.35■■■□□ 2.61
ETFA-213ENST00000560309 BCANQ96GW7 911 aa31.34■■■□□ 2.61
ETFA-213ENST00000560309 E9PCH4 1651 aa31.33■■■□□ 2.61
ETFA-213ENST00000560309 SLC26A8Q96RN1 970 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms