RNA–Protein interactions for RNA: ENST00000560309.5

ETFA-213, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-213ENST00000560309 NISCHQ9Y2I1 1504 aa51.11■■■■■ 5.77
ETFA-213ENST00000560309 CCDC180Q9P1Z9 1646 aa45.76■■■■■ 4.92
ETFA-213ENST00000560309 ABCC9O60706 1549 aa45.37■■■■■ 4.85
ETFA-213ENST00000560309 RB1CC1Q8TDY2 1594 aa43.44■■■■■ 4.54
ETFA-213ENST00000560309 NACADO15069 1562 aa43.25■■■■■ 4.51
ETFA-213ENST00000560309 DCAF8L2P0C7V8 631 aa43.03■■■■■ 4.48
ETFA-213ENST00000560309 MYO15BQ96JP2 1530 aa42.81■■■■■ 4.44
ETFA-213ENST00000560309 ZCCHC6Q5VYS8 1495 aaKnown RBP42.39■■■■■ 4.38
ETFA-213ENST00000560309 DCAF1Q9Y4B6 1507 aa42.33■■■■■ 4.37
ETFA-213ENST00000560309 PABPN1Q86U42 306 aaKnown RBP eCLIP42.31■■■■■ 4.36
ETFA-213ENST00000560309 UNC13AQ9UPW8 1703 aa42.3■■■■■ 4.36
ETFA-213ENST00000560309 DNAJC5BQ9UF47 199 aa42.3■■■■■ 4.36
ETFA-213ENST00000560309 BICRAQ9NZM4 1560 aa42.04■■■■■ 4.32
ETFA-213ENST00000560309 SHROOM4Q9ULL8 1493 aa41.73■■■■■ 4.27
ETFA-213ENST00000560309 SCRIBQ14160 1630 aa41.57■■■■■ 4.25
ETFA-213ENST00000560309 CC2D2AQ9P2K1 1620 aa41.04■■■■■ 4.16
ETFA-213ENST00000560309 EIF4G1Q04637 1599 aaKnown RBP41.03■■■■■ 4.16
ETFA-213ENST00000560309 CECR2Q9BXF3 1484 aa40.92■■■■■ 4.14
ETFA-213ENST00000560309 NCAPD3P42695 1498 aa39.93■■■■□ 3.98
ETFA-213ENST00000560309 ATAD2BQ9ULI0 1458 aa39.77■■■■□ 3.96
ETFA-213ENST00000560309 SMARCA4P51532 1647 aa39.76■■■■□ 3.96
ETFA-213ENST00000560309 SMARCA2P51531 1590 aa39.74■■■■□ 3.95
ETFA-213ENST00000560309 BAZ1AQ9NRL2 1556 aaPredicted RBP39.69■■■■□ 3.94
ETFA-213ENST00000560309 HMGXB3Q12766 1538 aa39.61■■■■□ 3.93
ETFA-213ENST00000560309 PEG3Q9GZU2 1588 aa39.46■■■■□ 3.91
ETFA-213ENST00000560309 BAZ1BQ9UIG0 1483 aaKnown RBP39.41■■■■□ 3.9
ETFA-213ENST00000560309 MROH2BQ7Z745 1585 aa39.3■■■■□ 3.88
ETFA-213ENST00000560309 ERCC6Q03468 1493 aa39.24■■■■□ 3.87
ETFA-213ENST00000560309 CUX2O14529 1486 aa39.13■■■■□ 3.85
ETFA-213ENST00000560309 NESP48681 1621 aa39.02■■■■□ 3.84
ETFA-213ENST00000560309 LAMC3Q9Y6N6 1575 aa38.95■■■■□ 3.83
ETFA-213ENST00000560309 WIZO95785 1651 aa38.82■■■■□ 3.81
ETFA-213ENST00000560309 DNAJC5Q9H3Z4 198 aa38.8■■■■□ 3.8
ETFA-213ENST00000560309 PDS5BQ9NTI5 1447 aa38.78■■■■□ 3.8
ETFA-213ENST00000560309 CADPSQ9ULU8 1353 aa38.72■■■■□ 3.79
ETFA-213ENST00000560309 RSF1Q96T23 1441 aaPredicted RBP38.65■■■■□ 3.78
ETFA-213ENST00000560309 THOC2Q8NI27 1593 aaKnown RBP38.6■■■■□ 3.77
ETFA-213ENST00000560309 KIF21AQ7Z4S6 1674 aa38.53■■■■□ 3.76
ETFA-213ENST00000560309 TOP2AP11388 1531 aaKnown RBP38.43■■■■□ 3.74
ETFA-213ENST00000560309 MRC2Q9UBG0 1479 aa38.34■■■■□ 3.73
ETFA-213ENST00000560309 CFTRP13569 1480 aa38.31■■■■□ 3.72
ETFA-213ENST00000560309 CEP164Q9UPV0 1460 aa38.24■■■■□ 3.71
ETFA-213ENST00000560309 WDR62O43379 1518 aa38.22■■■■□ 3.71
ETFA-213ENST00000560309 FANCD2Q9BXW9 1451 aa38.21■■■■□ 3.71
ETFA-213ENST00000560309 CCDC88BA6NC98 1476 aa37.99■■■■□ 3.67
ETFA-213ENST00000560309 PRDM2Q13029 1718 aa37.9■■■■□ 3.66
ETFA-213ENST00000560309 URB2Q14146 1524 aaKnown RBP37.82■■■■□ 3.64
ETFA-213ENST00000560309 ABCC8Q09428 1581 aa37.62■■■■□ 3.61
ETFA-213ENST00000560309 IFT140Q96RY7 1462 aa37.52■■■■□ 3.6
ETFA-213ENST00000560309 TOPBP1Q92547 1522 aa37.51■■■■□ 3.59
ETFA-213ENST00000560309 OSCARQ8IYS5 282 aa37.46■■■■□ 3.59
ETFA-213ENST00000560309 DNMBPQ6XZF7 1577 aa37.41■■■■□ 3.58
ETFA-213ENST00000560309 ZNF608Q9ULD9 1512 aaPredicted RBP37.28■■■■□ 3.56
ETFA-213ENST00000560309 SUPT5HO00267 1087 aaKnown RBP37.14■■■■□ 3.54
ETFA-213ENST00000560309 POLA1P09884 1462 aaPredicted RBP37.13■■■■□ 3.54
ETFA-213ENST00000560309 TARBP1Q13395 1621 aaKnown RBP37.12■■■■□ 3.53
ETFA-213ENST00000560309 EIF4G3O43432 1585 aaKnown RBP37.1■■■■□ 3.53
ETFA-213ENST00000560309 TRIM41Q8WV44 630 aa37.1■■■■□ 3.53
ETFA-213ENST00000560309 SOGA1O94964 1423 aa37.04■■■■□ 3.52
ETFA-213ENST00000560309 AQRO60306 1485 aaKnown RBP eCLIP37.03■■■■□ 3.522e-7■□□□□ 10.3
ETFA-213ENST00000560309 RAD54L2Q9Y4B4 1467 aa36.94■■■■□ 3.5
ETFA-213ENST00000560309 FGD5Q6ZNL6 1462 aa36.94■■■■□ 3.5
ETFA-213ENST00000560309 WDR97A6NE52 1622 aa36.92■■■■□ 3.5
ETFA-213ENST00000560309 CUX1P39880 1505 aa36.91■■■■□ 3.5
ETFA-213ENST00000560309 TDRD9Q8NDG6 1382 aaKnown RBP36.86■■■■□ 3.49
ETFA-213ENST00000560309 FBLN2P98095 1184 aa36.78■■■■□ 3.48
ETFA-213ENST00000560309 CHD1O14646 1710 aa36.76■■■■□ 3.47
ETFA-213ENST00000560309 RIMBP3CA6NJZ7 1639 aa36.74■■■■□ 3.47
ETFA-213ENST00000560309 RIMBP3BA6NNM3 1639 aa36.74■■■■□ 3.47
ETFA-213ENST00000560309 RIMBP3Q9UFD9 1639 aa36.74■■■■□ 3.47
ETFA-213ENST00000560309 ARHGEF11O15085 1522 aa36.69■■■■□ 3.46
ETFA-213ENST00000560309 GRIN2BQ13224 1484 aa36.69■■■■□ 3.46
ETFA-213ENST00000560309 MAGI1Q96QZ7 1491 aaPredicted RBP36.68■■■■□ 3.46
ETFA-213ENST00000560309 SNAPC4Q5SXM2 1469 aa36.64■■■■□ 3.46
ETFA-213ENST00000560309 CHMP7Q8WUX9 453 aaPredicted RBP36.64■■■■□ 3.46
ETFA-213ENST00000560309 ABCA10Q8WWZ4 1543 aa36.59■■■■□ 3.45
ETFA-213ENST00000560309 GAPVD1Q14C86 1478 aa36.58■■■■□ 3.45
ETFA-213ENST00000560309 WRNQ14191 1432 aaPredicted RBP eCLIP36.54■■■■□ 3.44
ETFA-213ENST00000560309 SYNJ2O15056 1496 aa36.52■■■■□ 3.44
ETFA-213ENST00000560309 SYNJ1O43426 1573 aa36.48■■■■□ 3.43
ETFA-213ENST00000560309 CYB5RLQ6IPT4 315 aa36.47■■■■□ 3.43
ETFA-213ENST00000560309 TOP2BQ02880 1626 aa36.46■■■■□ 3.43
ETFA-213ENST00000560309 PBRM1Q86U86 1689 aa36.45■■■■□ 3.42
ETFA-213ENST00000560309 ABCA5Q8WWZ7 1642 aa36.44■■■■□ 3.42
ETFA-213ENST00000560309 BIVM-ERCC5R4GMW8 1640 aa36.44■■■■□ 3.42
ETFA-213ENST00000560309 CLASP1Q7Z460 1538 aa36.39■■■■□ 3.42
ETFA-213ENST00000560309 ARAP1Q96P48 1450 aa36.32■■■■□ 3.41
ETFA-213ENST00000560309 ERICH3Q5RHP9 1530 aa36.17■■■■□ 3.38
ETFA-213ENST00000560309 GRIN2AQ12879 1464 aa36.17■■■■□ 3.38
ETFA-213ENST00000560309 FHAD1B1AJZ9 1412 aa36.16■■■■□ 3.38
ETFA-213ENST00000560309 ADAMTS12P58397 1594 aa36.13■■■■□ 3.37
ETFA-213ENST00000560309 NUP160Q12769 1436 aa36.06■■■■□ 3.36
ETFA-213ENST00000560309 TRHP20396 242 aaPredicted RBP35.98■■■■□ 3.35
ETFA-213ENST00000560309 CEP170Q5SW79 1584 aa35.95■■■■□ 3.35
ETFA-213ENST00000560309 KIF27Q86VH2 1401 aa35.84■■■■□ 3.33
ETFA-213ENST00000560309 SHROOM2Q13796 1616 aa35.83■■■■□ 3.33
ETFA-213ENST00000560309 IGF1RP08069 1367 aa35.76■■■■□ 3.32
ETFA-213ENST00000560309 JPH4Q96JJ6 628 aa35.76■■■■□ 3.32
ETFA-213ENST00000560309 ERCC6L2Q5T890 1561 aa35.74■■■■□ 3.31
ETFA-213ENST00000560309 PRG4Q92954 1404 aaPredicted RBP35.68■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms