RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 KDM5DQ9BY66 1539 aa9.31□□□□□ -0.92
USP3-212ENST00000559276 PZPP20742 1482 aa9.3□□□□□ -0.92
USP3-212ENST00000559276 LOC105371045A0A1W2PR82 267 aa9.3□□□□□ -0.92
USP3-212ENST00000559276 FAM135AQ9P2D6 1515 aa9.3□□□□□ -0.92
USP3-212ENST00000559276 VPS8Q8N3P4 1428 aa9.3□□□□□ -0.92
USP3-212ENST00000559276 MAST1Q9Y2H9 1570 aa9.29□□□□□ -0.92
USP3-212ENST00000559276 POLR1AO95602 1720 aaPredicted RBP9.29□□□□□ -0.92
USP3-212ENST00000559276 KIF3BO15066 747 aa9.29□□□□□ -0.92
USP3-212ENST00000559276 PKD2Q13563 968 aa9.29□□□□□ -0.92
USP3-212ENST00000559276 KANK4Q5T7N3 995 aaPredicted RBP9.29□□□□□ -0.92
USP3-212ENST00000559276 ILDR2Q71H61 639 aa9.29□□□□□ -0.92
USP3-212ENST00000559276 MROH1Q8NDA8 1641 aa9.29□□□□□ -0.92
USP3-212ENST00000559276 RNF17Q9BXT8 1623 aaKnown RBP9.29□□□□□ -0.92
USP3-212ENST00000559276 TNRQ92752 1358 aa9.27□□□□□ -0.93
USP3-212ENST00000559276 MAP3K1Q13233 1512 aa9.27□□□□□ -0.93
USP3-212ENST00000559276 RSPH4AQ5TD94 716 aa9.27□□□□□ -0.93
USP3-212ENST00000559276 ABCC3O15438 1527 aa9.26□□□□□ -0.93
USP3-212ENST00000559276 MIA2Q96PC5 1412 aa9.26□□□□□ -0.93
USP3-212ENST00000559276 EIF2AK4Q9P2K8 1649 aaKnown RBP9.26□□□□□ -0.93
USP3-212ENST00000559276 DISP3Q9P2K9 1392 aa9.25□□□□□ -0.93
USP3-212ENST00000559276 SPATA31D1Q6ZQQ2 1576 aa9.25□□□□□ -0.93
USP3-212ENST00000559276 VWDEQ8N2E2 1590 aa9.25□□□□□ -0.93
USP3-212ENST00000559276 ZC3H13Q5T200 1668 aaKnown RBP9.25□□□□□ -0.93
USP3-212ENST00000559276 WASHC2CQ9Y4E1 1318 aa9.25□□□□□ -0.93
USP3-212ENST00000559276 ALKQ9UM73 1620 aa9.24□□□□□ -0.93
USP3-212ENST00000559276 MYOM3Q5VTT5 1437 aa9.24□□□□□ -0.93
USP3-212ENST00000559276 MED14O60244 1454 aa9.24□□□□□ -0.93
USP3-212ENST00000559276 CEP152O94986 1710 aa9.24□□□□□ -0.93
USP3-212ENST00000559276 STRCP1A6NGW2 1772 aa9.24□□□□□ -0.93
USP3-212ENST00000559276 UGGT1Q9NYU2 1555 aa9.24□□□□□ -0.93
USP3-212ENST00000559276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.24□□□□□ -0.93
USP3-212ENST00000559276 DEPDC5O75140 1603 aa9.23□□□□□ -0.93
USP3-212ENST00000559276 CROCC2H7BZ55 1655 aa9.23□□□□□ -0.93
USP3-212ENST00000559276 NLRP1Q9C000 1473 aa9.23□□□□□ -0.93
USP3-212ENST00000559276 TSPY4P0CV99 314 aa9.23□□□□□ -0.93
USP3-212ENST00000559276 TSPY10P0CW01 314 aa9.23□□□□□ -0.93
USP3-212ENST00000559276 ERVK-7P63135 1459 aa9.22□□□□□ -0.93
USP3-212ENST00000559276 SHANK2Q9UPX8 1470 aa9.22□□□□□ -0.93
USP3-212ENST00000559276 UBAP1LF5GYI3 381 aa9.22□□□□□ -0.93
USP3-212ENST00000559276 UBR1Q8IWV7 1749 aa9.22□□□□□ -0.93
USP3-212ENST00000559276 CPS1P31327 1500 aa9.21□□□□□ -0.93
USP3-212ENST00000559276 IQGAP1P46940 1657 aa9.21□□□□□ -0.93
USP3-212ENST00000559276 ABCC5O15440 1437 aa9.21□□□□□ -0.94
USP3-212ENST00000559276 NPHP4O75161 1426 aaPredicted RBP9.21□□□□□ -0.94
USP3-212ENST00000559276 PRDM15P57071 1507 aaPredicted RBP9.21□□□□□ -0.94
USP3-212ENST00000559276 DUOX2Q9NRD8 1548 aa9.21□□□□□ -0.94
USP3-212ENST00000559276 HRCP23327 699 aa9.2□□□□□ -0.94
USP3-212ENST00000559276 CFAP65Q6ZU64 1925 aaKnown RBP9.2□□□□□ -0.94
USP3-212ENST00000559276 PTPN23Q9H3S7 1636 aa9.2□□□□□ -0.94
USP3-212ENST00000559276 SOCS7O14512 581 aa9.19□□□□□ -0.94
USP3-212ENST00000559276 ANKLE2Q86XL3 938 aa9.19□□□□□ -0.94
USP3-212ENST00000559276 THEMISQ8N1K5 641 aaPredicted RBP9.19□□□□□ -0.94
USP3-212ENST00000559276 ARHGAP23Q9P227 1491 aa9.18□□□□□ -0.94
USP3-212ENST00000559276 LRRC7Q96NW7 1537 aa9.17□□□□□ -0.94
USP3-212ENST00000559276 DAPK1P53355 1430 aa9.17□□□□□ -0.94
USP3-212ENST00000559276 ARHGAP31Q2M1Z3 1444 aa9.17□□□□□ -0.94
USP3-212ENST00000559276 KIF15Q9NS87 1388 aa9.17□□□□□ -0.94
USP3-212ENST00000559276 HSPA1LP34931 641 aa9.17□□□□□ -0.94
USP3-212ENST00000559276 SLIT1O75093 1534 aa9.16□□□□□ -0.94
USP3-212ENST00000559276 FGD6Q6ZV73 1430 aa9.16□□□□□ -0.94
USP3-212ENST00000559276 ERBINQ96RT1 1412 aa9.16□□□□□ -0.94
USP3-212ENST00000559276 XIRP1Q702N8 1843 aaKnown RBP9.16□□□□□ -0.94
USP3-212ENST00000559276 PIK3C2BO00750 1634 aa9.16□□□□□ -0.94
USP3-212ENST00000559276 LTKP29376 864 aa9.15□□□□□ -0.94
USP3-212ENST00000559276 RRP7BPQ9NSQ0 103 aa9.15□□□□□ -0.94
USP3-212ENST00000559276 SYNMO15061 1565 aa9.15□□□□□ -0.95
USP3-212ENST00000559276 MED1Q15648 1581 aaPredicted RBP9.15□□□□□ -0.95
USP3-212ENST00000559276 PIP4K2BP78356 416 aa9.14□□□□□ -0.95
USP3-212ENST00000559276 LMTK2Q8IWU2 1503 aa9.14□□□□□ -0.95
USP3-212ENST00000559276 SCAF11Q99590 1463 aaKnown RBP9.14□□□□□ -0.95
USP3-212ENST00000559276 KDM5AP29375 1690 aaKnown RBP9.13□□□□□ -0.95
USP3-212ENST00000559276 TOM1O60784 492 aa9.13□□□□□ -0.95
USP3-212ENST00000559276 EFCAB6Q5THR3 1501 aa9.11□□□□□ -0.95
USP3-212ENST00000559276 TET3O43151 1660 aa9.11□□□□□ -0.95
USP3-212ENST00000559276 ADGRL2O95490 1459 aa9.11□□□□□ -0.95
USP3-212ENST00000559276 NOS1P29475 1434 aa9.11□□□□□ -0.95
USP3-212ENST00000559276 TMEM2Q9UHN6 1383 aa9.11□□□□□ -0.95
USP3-212ENST00000559276 SCAF1Q9H7N4 1312 aaKnown RBP9.1□□□□□ -0.95
USP3-212ENST00000559276 IDI1Q13907 227 aa9.1□□□□□ -0.95
USP3-212ENST00000559276 TXNDC2Q86VQ3 553 aa9.1□□□□□ -0.95
USP3-212ENST00000559276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.1□□□□□ -0.95
USP3-212ENST00000559276 CHIC2Q9UKJ5 165 aa9.1□□□□□ -0.95
USP3-212ENST00000559276 ANKRD30AQ9BXX3 1397 aa9.1□□□□□ -0.95
USP3-212ENST00000559276 MYO5BQ9ULV0 1848 aa9.08□□□□□ -0.96
USP3-212ENST00000559276 ADGRB3O60242 1522 aa9.07□□□□□ -0.96
USP3-212ENST00000559276 APLP2Q06481 763 aa9.06□□□□□ -0.96
USP3-212ENST00000559276 KANK1Q14678 1352 aa9.06□□□□□ -0.96
USP3-212ENST00000559276 UNC13BO14795 1591 aa9.06□□□□□ -0.96
USP3-212ENST00000559276 NWD1Q149M9 1564 aa9.06□□□□□ -0.96
USP3-212ENST00000559276 ZFYVE9O95405 1425 aa9.05□□□□□ -0.96
USP3-212ENST00000559276 ANKRD50Q9ULJ7 1429 aa9.05□□□□□ -0.96
USP3-212ENST00000559276 GCC2Q8IWJ2 1684 aa9.05□□□□□ -0.96
USP3-212ENST00000559276 TMEM131LA2VDJ0 1609 aa9.05□□□□□ -0.96
USP3-212ENST00000559276 E9PCH4 1651 aa9.04□□□□□ -0.96
USP3-212ENST00000559276 RPRD2Q5VT52 1461 aaKnown RBP9.04□□□□□ -0.96
USP3-212ENST00000559276 TMEM94Q12767 1356 aa9.04□□□□□ -0.96
USP3-212ENST00000559276 SLC26A8Q96RN1 970 aa9.04□□□□□ -0.96
USP3-212ENST00000559276 SENP3Q9H4L4 574 aaPredicted RBP9.04□□□□□ -0.96
USP3-212ENST00000559276 EID1Q9Y6B2 187 aa9.04□□□□□ -0.96
USP3-212ENST00000559276 KCNA6P17658 529 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms