RNA–Protein interactions for RNA: ENST00000558560.1

RMDN3-206, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 5

Gene RMDN3, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-206ENST00000558560 TCOF1Q13428 1488 aaKnown RBP29.49■■■□□ 2.31
RMDN3-206ENST00000558560 KIF3BO15066 747 aa29.49■■■□□ 2.31
RMDN3-206ENST00000558560 KDM5DQ9BY66 1539 aa29.48■■■□□ 2.31
RMDN3-206ENST00000558560 A2ML1A8K2U0 1454 aa29.48■■■□□ 2.31
RMDN3-206ENST00000558560 MAST1Q9Y2H9 1570 aa29.44■■■□□ 2.3
RMDN3-206ENST00000558560 PZPP20742 1482 aa29.44■■■□□ 2.3
RMDN3-206ENST00000558560 NCKAP5LQ9HCH0 1330 aa29.44■■■□□ 2.3
RMDN3-206ENST00000558560 MIA2Q96PC5 1412 aa29.43■■■□□ 2.3
RMDN3-206ENST00000558560 DNMT1P26358 1616 aaKnown RBP29.42■■■□□ 2.3
RMDN3-206ENST00000558560 LOC105371045A0A1W2PR82 267 aa29.42■■■□□ 2.3
RMDN3-206ENST00000558560 WASHC2CQ9Y4E1 1318 aa29.41■■■□□ 2.3
RMDN3-206ENST00000558560 TNRQ92752 1358 aa29.39■■■□□ 2.3
RMDN3-206ENST00000558560 RNF17Q9BXT8 1623 aaKnown RBP29.37■■■□□ 2.29
RMDN3-206ENST00000558560 MYOM3Q5VTT5 1437 aa29.37■■■□□ 2.29
RMDN3-206ENST00000558560 EIF2AK4Q9P2K8 1649 aaKnown RBP29.35■■■□□ 2.29
RMDN3-206ENST00000558560 ZC3H13Q5T200 1668 aaKnown RBP29.34■■■□□ 2.29
RMDN3-206ENST00000558560 POLR1AO95602 1720 aaPredicted RBP29.34■■■□□ 2.29
RMDN3-206ENST00000558560 NLRP1Q9C000 1473 aa29.33■■■□□ 2.29
RMDN3-206ENST00000558560 KANK4Q5T7N3 995 aaPredicted RBP29.32■■■□□ 2.28
RMDN3-206ENST00000558560 FBXO31Q5XUX0 539 aaPredicted RBP29.32■■■□□ 2.28
RMDN3-206ENST00000558560 ZNF335Q9H4Z2 1342 aaPredicted RBP29.31■■■□□ 2.28
RMDN3-206ENST00000558560 THEMISQ8N1K5 641 aaPredicted RBP29.28■■■□□ 2.28
RMDN3-206ENST00000558560 ABCC3O15438 1527 aa29.25■■■□□ 2.27
RMDN3-206ENST00000558560 DUOX2Q9NRD8 1548 aa29.25■■■□□ 2.27
RMDN3-206ENST00000558560 NEURL4Q96JN8 1562 aa29.23■■■□□ 2.27
RMDN3-206ENST00000558560 ANKLE2Q86XL3 938 aa29.23■■■□□ 2.27
RMDN3-206ENST00000558560 DEPDC5O75140 1603 aa29.23■■■□□ 2.27
RMDN3-206ENST00000558560 SPATA31D1Q6ZQQ2 1576 aa29.22■■■□□ 2.27
RMDN3-206ENST00000558560 UGGT1Q9NYU2 1555 aa29.22■■■□□ 2.27
RMDN3-206ENST00000558560 SHANK2Q9UPX8 1470 aa29.22■■■□□ 2.27
RMDN3-206ENST00000558560 APLP2Q06481 763 aa29.21■■■□□ 2.27
RMDN3-206ENST00000558560 MED14O60244 1454 aa29.2■■■□□ 2.26
RMDN3-206ENST00000558560 MROH1Q8NDA8 1641 aa29.2■■■□□ 2.26
RMDN3-206ENST00000558560 CPS1P31327 1500 aa29.2■■■□□ 2.26
RMDN3-206ENST00000558560 CROCC2H7BZ55 1655 aa29.18■■■□□ 2.26
RMDN3-206ENST00000558560 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.17■■■□□ 2.26
RMDN3-206ENST00000558560 UBAP1LF5GYI3 381 aa29.16■■■□□ 2.26
RMDN3-206ENST00000558560 PTPN23Q9H3S7 1636 aa29.16■■■□□ 2.26
RMDN3-206ENST00000558560 DISP3Q9P2K9 1392 aa29.15■■■□□ 2.26
RMDN3-206ENST00000558560 ERBINQ96RT1 1412 aa29.15■■■□□ 2.26
RMDN3-206ENST00000558560 ERVK-7P63135 1459 aa29.15■■■□□ 2.26
RMDN3-206ENST00000558560 ABCC5O15440 1437 aa29.13■■■□□ 2.25
RMDN3-206ENST00000558560 CFAP65Q6ZU64 1925 aaKnown RBP29.13■■■□□ 2.25
RMDN3-206ENST00000558560 CEP152O94986 1710 aa29.13■■■□□ 2.25
RMDN3-206ENST00000558560 KIF15Q9NS87 1388 aa29.13■■■□□ 2.25
RMDN3-206ENST00000558560 ARHGAP31Q2M1Z3 1444 aa29.12■■■□□ 2.25
RMDN3-206ENST00000558560 PRDM15P57071 1507 aaPredicted RBP29.11■■■□□ 2.25
RMDN3-206ENST00000558560 NPHP4O75161 1426 aaPredicted RBP29.11■■■□□ 2.25
RMDN3-206ENST00000558560 FGD6Q6ZV73 1430 aa29.08■■■□□ 2.25
RMDN3-206ENST00000558560 VWDEQ8N2E2 1590 aa29.08■■■□□ 2.25
RMDN3-206ENST00000558560 IQGAP1P46940 1657 aa29.08■■■□□ 2.25
RMDN3-206ENST00000558560 DAPK1P53355 1430 aa29.07■■■□□ 2.24
RMDN3-206ENST00000558560 UBR1Q8IWV7 1749 aa29.05■■■□□ 2.24
RMDN3-206ENST00000558560 TOM1O60784 492 aa29.03■■■□□ 2.24
RMDN3-206ENST00000558560 RRP7BPQ9NSQ0 103 aa29.02■■■□□ 2.24
RMDN3-206ENST00000558560 KANK1Q14678 1352 aa29.01■■■□□ 2.23
RMDN3-206ENST00000558560 ANKRD30AQ9BXX3 1397 aa29.01■■■□□ 2.23
RMDN3-206ENST00000558560 SLIT1O75093 1534 aa28.97■■■□□ 2.23
RMDN3-206ENST00000558560 LMTK2Q8IWU2 1503 aa28.97■■■□□ 2.23
RMDN3-206ENST00000558560 ARHGAP23Q9P227 1491 aa28.97■■■□□ 2.23
RMDN3-206ENST00000558560 KDM5AP29375 1690 aaKnown RBP28.96■■■□□ 2.23
RMDN3-206ENST00000558560 ILDR2Q71H61 639 aa28.95■■■□□ 2.22
RMDN3-206ENST00000558560 SCAF11Q99590 1463 aaKnown RBP28.95■■■□□ 2.22
RMDN3-206ENST00000558560 SYNMO15061 1565 aa28.93■■■□□ 2.22
RMDN3-206ENST00000558560 SOCS7O14512 581 aa28.92■■■□□ 2.22
RMDN3-206ENST00000558560 ADGRL2O95490 1459 aa28.91■■■□□ 2.22
RMDN3-206ENST00000558560 STRCP1A6NGW2 1772 aa28.9■■■□□ 2.22
RMDN3-206ENST00000558560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.9■■■□□ 2.223e-6■■□□□ 12.1
RMDN3-206ENST00000558560 EID1Q9Y6B2 187 aa28.88■■■□□ 2.21
RMDN3-206ENST00000558560 LRRC7Q96NW7 1537 aa28.88■■■□□ 2.21
RMDN3-206ENST00000558560 TXNDC2Q86VQ3 553 aa28.87■■■□□ 2.21
RMDN3-206ENST00000558560 PIK3C2BO00750 1634 aa28.87■■■□□ 2.21
RMDN3-206ENST00000558560 CHIC2Q9UKJ5 165 aa28.86■■■□□ 2.21
RMDN3-206ENST00000558560 LTKP29376 864 aa28.85■■■□□ 2.21
RMDN3-206ENST00000558560 PIP4K2BP78356 416 aa28.85■■■□□ 2.21
RMDN3-206ENST00000558560 SCAF1Q9H7N4 1312 aaKnown RBP28.84■■■□□ 2.21
RMDN3-206ENST00000558560 TMEM2Q9UHN6 1383 aa28.84■■■□□ 2.21
RMDN3-206ENST00000558560 HSPA1LP34931 641 aa28.83■■■□□ 2.21
RMDN3-206ENST00000558560 ALKQ9UM73 1620 aa28.83■■■□□ 2.21
RMDN3-206ENST00000558560 EFCAB6Q5THR3 1501 aa28.82■■■□□ 2.2
RMDN3-206ENST00000558560 NOS1P29475 1434 aa28.81■■■□□ 2.2
RMDN3-206ENST00000558560 STAG3Q9UJ98 1225 aa28.8■■■□□ 2.2
RMDN3-206ENST00000558560 RPRD2Q5VT52 1461 aaKnown RBP28.79■■■□□ 2.2
RMDN3-206ENST00000558560 IDI1Q13907 227 aa28.79■■■□□ 2.2
RMDN3-206ENST00000558560 SLC52A1Q9NWF4 448 aa28.78■■■□□ 2.2
RMDN3-206ENST00000558560 ANKRD50Q9ULJ7 1429 aa28.77■■■□□ 2.2
RMDN3-206ENST00000558560 FAM50AQ14320 339 aaKnown RBP28.75■■■□□ 2.19
RMDN3-206ENST00000558560 XIRP1Q702N8 1843 aaKnown RBP28.72■■■□□ 2.19
RMDN3-206ENST00000558560 ADGRB3O60242 1522 aa28.72■■■□□ 2.19
RMDN3-206ENST00000558560 TET3O43151 1660 aa28.71■■■□□ 2.19
RMDN3-206ENST00000558560 MED1Q15648 1581 aaPredicted RBP28.71■■■□□ 2.19
RMDN3-206ENST00000558560 GCC2Q8IWJ2 1684 aa28.68■■■□□ 2.18
RMDN3-206ENST00000558560 ROCK1Q13464 1354 aa28.66■■■□□ 2.18
RMDN3-206ENST00000558560 KCNA6P17658 529 aa28.66■■■□□ 2.18
RMDN3-206ENST00000558560 UNC13BO14795 1591 aa28.66■■■□□ 2.18
RMDN3-206ENST00000558560 HDGFP51858 240 aaKnown RBP28.63■■■□□ 2.17
RMDN3-206ENST00000558560 MYO5BQ9ULV0 1848 aa28.59■■■□□ 2.17
RMDN3-206ENST00000558560 NKTRP30414 1462 aaKnown RBP28.59■■■□□ 2.17
RMDN3-206ENST00000558560 FAM135BQ49AJ0 1406 aa28.58■■■□□ 2.17
RMDN3-206ENST00000558560 NWD1Q149M9 1564 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms