RNA–Protein interactions for RNA: ENST00000558005.1

CRTC3-203, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 570 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-203ENST00000558005 MBD5Q9P267 1494 aa19.24■□□□□ 0.67
CRTC3-203ENST00000558005 PZPP20742 1482 aa19.23■□□□□ 0.67
CRTC3-203ENST00000558005 CCDC141Q6ZP82 1450 aa19.23■□□□□ 0.67
CRTC3-203ENST00000558005 POLR1AO95602 1720 aaPredicted RBP19.22■□□□□ 0.67
CRTC3-203ENST00000558005 DNMT1P26358 1616 aaKnown RBP19.22■□□□□ 0.67
CRTC3-203ENST00000558005 TNRQ92752 1358 aa19.22■□□□□ 0.67
CRTC3-203ENST00000558005 NLRP1Q9C000 1473 aa19.21■□□□□ 0.67
CRTC3-203ENST00000558005 TOM1O60784 492 aa19.2■□□□□ 0.66
CRTC3-203ENST00000558005 THEMISQ8N1K5 641 aaPredicted RBP19.17■□□□□ 0.66
CRTC3-203ENST00000558005 SHANK2Q9UPX8 1470 aa19.16■□□□□ 0.66
CRTC3-203ENST00000558005 KIF3BO15066 747 aa19.16■□□□□ 0.66
CRTC3-203ENST00000558005 ANKLE2Q86XL3 938 aa19.16■□□□□ 0.66
CRTC3-203ENST00000558005 WASHC2CQ9Y4E1 1318 aa19.16■□□□□ 0.66
CRTC3-203ENST00000558005 CAMSAP2Q08AD1 1489 aa19.15■□□□□ 0.66
CRTC3-203ENST00000558005 ARHGEF5Q12774 1597 aa19.15■□□□□ 0.66
CRTC3-203ENST00000558005 DEPDC5O75140 1603 aa19.14■□□□□ 0.66
CRTC3-203ENST00000558005 ZNF644Q9H582 1327 aaPredicted RBP19.14■□□□□ 0.65
CRTC3-203ENST00000558005 NEURL4Q96JN8 1562 aa19.14■□□□□ 0.65
CRTC3-203ENST00000558005 ZC3H13Q5T200 1668 aaKnown RBP19.12■□□□□ 0.65
CRTC3-203ENST00000558005 MED14O60244 1454 aa19.12■□□□□ 0.65
CRTC3-203ENST00000558005 NCOA2Q15596 1464 aa19.12■□□□□ 0.65
CRTC3-203ENST00000558005 MIA2Q96PC5 1412 aa19.12■□□□□ 0.65
CRTC3-203ENST00000558005 TSPY4P0CV99 314 aa19.12■□□□□ 0.65
CRTC3-203ENST00000558005 TSPY10P0CW01 314 aa19.12■□□□□ 0.65
CRTC3-203ENST00000558005 UGGT1Q9NYU2 1555 aa19.11■□□□□ 0.65
CRTC3-203ENST00000558005 SCAF1Q9H7N4 1312 aaKnown RBP19.1■□□□□ 0.65
CRTC3-203ENST00000558005 NPHP4O75161 1426 aaPredicted RBP19.09■□□□□ 0.65
CRTC3-203ENST00000558005 RNF17Q9BXT8 1623 aaKnown RBP19.07■□□□□ 0.64
CRTC3-203ENST00000558005 EIF2AK4Q9P2K8 1649 aaKnown RBP19.07■□□□□ 0.64
CRTC3-203ENST00000558005 MED1Q15648 1581 aaPredicted RBP19.07■□□□□ 0.64
CRTC3-203ENST00000558005 SYNMO15061 1565 aa19.06■□□□□ 0.64
CRTC3-203ENST00000558005 VWDEQ8N2E2 1590 aa19.06■□□□□ 0.64
CRTC3-203ENST00000558005 FBXO31Q5XUX0 539 aaPredicted RBP19.06■□□□□ 0.64
CRTC3-203ENST00000558005 MAST1Q9Y2H9 1570 aa19.06■□□□□ 0.64
CRTC3-203ENST00000558005 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.06■□□□□ 0.64
CRTC3-203ENST00000558005 IQGAP1P46940 1657 aa19.05■□□□□ 0.64
CRTC3-203ENST00000558005 PIP4K2BP78356 416 aa19.05■□□□□ 0.64
CRTC3-203ENST00000558005 HSPA1LP34931 641 aa19.04■□□□□ 0.64
CRTC3-203ENST00000558005 ABCC3O15438 1527 aa19.03■□□□□ 0.64
CRTC3-203ENST00000558005 PHF23Q9BUL5 403 aaPredicted RBP19■□□□□ 0.63
CRTC3-203ENST00000558005 ERVK-7P63135 1459 aa18.99■□□□□ 0.63
CRTC3-203ENST00000558005 MAP3K1Q13233 1512 aa18.97■□□□□ 0.63
CRTC3-203ENST00000558005 LRRC9Q6ZRR7 1453 aa18.97■□□□□ 0.63
CRTC3-203ENST00000558005 DUOX2Q9NRD8 1548 aa18.96■□□□□ 0.63
CRTC3-203ENST00000558005 SCAF11Q99590 1463 aaKnown RBP18.96■□□□□ 0.63
CRTC3-203ENST00000558005 MYOM3Q5VTT5 1437 aa18.95■□□□□ 0.62
CRTC3-203ENST00000558005 VPS8Q8N3P4 1428 aa18.95■□□□□ 0.62
CRTC3-203ENST00000558005 LRRC7Q96NW7 1537 aa18.94■□□□□ 0.62
CRTC3-203ENST00000558005 ARHGAP31Q2M1Z3 1444 aa18.93■□□□□ 0.62
CRTC3-203ENST00000558005 ERBINQ96RT1 1412 aa18.91■□□□□ 0.62
CRTC3-203ENST00000558005 SLIT1O75093 1534 aa18.91■□□□□ 0.62
CRTC3-203ENST00000558005 EID1Q9Y6B2 187 aa18.91■□□□□ 0.62
CRTC3-203ENST00000558005 UBR1Q8IWV7 1749 aa18.91■□□□□ 0.62
CRTC3-203ENST00000558005 PRDM15P57071 1507 aaPredicted RBP18.9■□□□□ 0.62
CRTC3-203ENST00000558005 MROH1Q8NDA8 1641 aa18.9■□□□□ 0.62
CRTC3-203ENST00000558005 ALKQ9UM73 1620 aa18.89■□□□□ 0.62
CRTC3-203ENST00000558005 ARHGAP23Q9P227 1491 aa18.89■□□□□ 0.61
CRTC3-203ENST00000558005 KANK1Q14678 1352 aa18.88■□□□□ 0.61
CRTC3-203ENST00000558005 KDM5AP29375 1690 aaKnown RBP18.87■□□□□ 0.61
CRTC3-203ENST00000558005 CEP152O94986 1710 aa18.86■□□□□ 0.61
CRTC3-203ENST00000558005 KIF15Q9NS87 1388 aa18.86■□□□□ 0.61
CRTC3-203ENST00000558005 STRCP1A6NGW2 1772 aa18.84■□□□□ 0.61
CRTC3-203ENST00000558005 TXNDC2Q86VQ3 553 aa18.84■□□□□ 0.61
CRTC3-203ENST00000558005 CROCC2H7BZ55 1655 aa18.82■□□□□ 0.6
CRTC3-203ENST00000558005 TMEM2Q9UHN6 1383 aa18.81■□□□□ 0.6
CRTC3-203ENST00000558005 STAG3Q9UJ98 1225 aa18.81■□□□□ 0.6
CRTC3-203ENST00000558005 FAM135BQ49AJ0 1406 aa18.8■□□□□ 0.6
CRTC3-203ENST00000558005 EFCAB6Q5THR3 1501 aa18.79■□□□□ 0.6
CRTC3-203ENST00000558005 LMTK2Q8IWU2 1503 aa18.79■□□□□ 0.6
CRTC3-203ENST00000558005 APLP2Q06481 763 aa18.77■□□□□ 0.6
CRTC3-203ENST00000558005 PIK3C2BO00750 1634 aa18.77■□□□□ 0.6
CRTC3-203ENST00000558005 ANKRD30AQ9BXX3 1397 aa18.77■□□□□ 0.6
CRTC3-203ENST00000558005 NKTRP30414 1462 aaKnown RBP18.77■□□□□ 0.59
CRTC3-203ENST00000558005 LTKP29376 864 aa18.76■□□□□ 0.59
CRTC3-203ENST00000558005 CFAP65Q6ZU64 1925 aaKnown RBP18.76■□□□□ 0.59
CRTC3-203ENST00000558005 ABCC5O15440 1437 aa18.75■□□□□ 0.59
CRTC3-203ENST00000558005 PTPN23Q9H3S7 1636 aa18.75■□□□□ 0.59
CRTC3-203ENST00000558005 DAPK1P53355 1430 aa18.74■□□□□ 0.59
CRTC3-203ENST00000558005 KCNA6P17658 529 aa18.73■□□□□ 0.59
CRTC3-203ENST00000558005 TMEM94Q12767 1356 aa18.72■□□□□ 0.59
CRTC3-203ENST00000558005 RRP7BPQ9NSQ0 103 aa18.72■□□□□ 0.59
CRTC3-203ENST00000558005 RPRD2Q5VT52 1461 aaKnown RBP18.71■□□□□ 0.59
CRTC3-203ENST00000558005 ADGRB3O60242 1522 aa18.71■□□□□ 0.59
CRTC3-203ENST00000558005 KANK4Q5T7N3 995 aaPredicted RBP18.71■□□□□ 0.59
CRTC3-203ENST00000558005 SLC52A1Q9NWF4 448 aa18.71■□□□□ 0.59
CRTC3-203ENST00000558005 XIRP1Q702N8 1843 aaKnown RBP18.71■□□□□ 0.59
CRTC3-203ENST00000558005 NWD1Q149M9 1564 aa18.7■□□□□ 0.58
CRTC3-203ENST00000558005 FGD6Q6ZV73 1430 aa18.7■□□□□ 0.58
CRTC3-203ENST00000558005 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.7■□□□□ 0.58
CRTC3-203ENST00000558005 HDGFP51858 240 aaKnown RBP18.69■□□□□ 0.58
CRTC3-203ENST00000558005 MSH6P52701 1360 aa18.68■□□□□ 0.58
CRTC3-203ENST00000558005 NOS1P29475 1434 aa18.68■□□□□ 0.58
CRTC3-203ENST00000558005 SENP3Q9H4L4 574 aaPredicted RBP18.68■□□□□ 0.58
CRTC3-203ENST00000558005 TET3O43151 1660 aa18.66■□□□□ 0.58
CRTC3-203ENST00000558005 IDI1Q13907 227 aa18.66■□□□□ 0.58
CRTC3-203ENST00000558005 PROSER2Q86WR7 435 aaPredicted RBP18.66■□□□□ 0.58
CRTC3-203ENST00000558005 ROBO1Q9Y6N7 1651 aa18.66■□□□□ 0.58
CRTC3-203ENST00000558005 ADGRL2O95490 1459 aa18.65■□□□□ 0.58
CRTC3-203ENST00000558005 NCOA3Q9Y6Q9 1424 aa18.64■□□□□ 0.57
CRTC3-203ENST00000558005 BCANQ96GW7 911 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms