RNA–Protein interactions for RNA: ENST00000558005.1

CRTC3-203, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 570 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-203ENST00000558005 NISCHQ9Y2I1 1504 aa30.25■■■□□ 2.43
CRTC3-203ENST00000558005 ABCC9O60706 1549 aa27.41■■□□□ 1.98
CRTC3-203ENST00000558005 CCDC180Q9P1Z9 1646 aa27.39■■□□□ 1.98
CRTC3-203ENST00000558005 RB1CC1Q8TDY2 1594 aa26.17■■□□□ 1.78
CRTC3-203ENST00000558005 NACADO15069 1562 aa25.95■■□□□ 1.74
CRTC3-203ENST00000558005 DNAJC5BQ9UF47 199 aa25.78■■□□□ 1.72
CRTC3-203ENST00000558005 MYO15BQ96JP2 1530 aa25.58■■□□□ 1.68
CRTC3-203ENST00000558005 DCAF8L2P0C7V8 631 aa25.49■■□□□ 1.67
CRTC3-203ENST00000558005 PABPN1Q86U42 306 aaKnown RBP eCLIP25.4■■□□□ 1.66
CRTC3-203ENST00000558005 UNC13AQ9UPW8 1703 aa25.39■■□□□ 1.65
CRTC3-203ENST00000558005 BICRAQ9NZM4 1560 aa25.25■■□□□ 1.63
CRTC3-203ENST00000558005 SHROOM4Q9ULL8 1493 aa25.22■■□□□ 1.63
CRTC3-203ENST00000558005 DCAF1Q9Y4B6 1507 aa25.11■■□□□ 1.61
CRTC3-203ENST00000558005 ZCCHC6Q5VYS8 1495 aaKnown RBP25.04■■□□□ 1.6
CRTC3-203ENST00000558005 CECR2Q9BXF3 1484 aa24.81■■□□□ 1.56
CRTC3-203ENST00000558005 CC2D2AQ9P2K1 1620 aa24.8■■□□□ 1.56
CRTC3-203ENST00000558005 SCRIBQ14160 1630 aa24.75■■□□□ 1.55
CRTC3-203ENST00000558005 EIF4G1Q04637 1599 aaKnown RBP24.73■■□□□ 1.55
CRTC3-203ENST00000558005 DNAJC5Q9H3Z4 198 aa24.07■■□□□ 1.44
CRTC3-203ENST00000558005 CUX2O14529 1486 aa23.94■■□□□ 1.42
CRTC3-203ENST00000558005 NCAPD3P42695 1498 aa23.9■■□□□ 1.42
CRTC3-203ENST00000558005 ERCC6Q03468 1493 aa23.83■■□□□ 1.41
CRTC3-203ENST00000558005 SMARCA2P51531 1590 aa23.78■■□□□ 1.4
CRTC3-203ENST00000558005 HMGXB3Q12766 1538 aa23.75■■□□□ 1.39
CRTC3-203ENST00000558005 ATAD2BQ9ULI0 1458 aa23.73■■□□□ 1.39
CRTC3-203ENST00000558005 SMARCA4P51532 1647 aa23.66■■□□□ 1.38
CRTC3-203ENST00000558005 BAZ1AQ9NRL2 1556 aaPredicted RBP23.59■■□□□ 1.37
CRTC3-203ENST00000558005 BAZ1BQ9UIG0 1483 aaKnown RBP23.55■■□□□ 1.36
CRTC3-203ENST00000558005 PEG3Q9GZU2 1588 aa23.5■■□□□ 1.35
CRTC3-203ENST00000558005 LAMC3Q9Y6N6 1575 aa23.44■■□□□ 1.34
CRTC3-203ENST00000558005 NESP48681 1621 aa23.42■■□□□ 1.34
CRTC3-203ENST00000558005 THOC2Q8NI27 1593 aaKnown RBP23.36■■□□□ 1.33
CRTC3-203ENST00000558005 PDS5BQ9NTI5 1447 aa23.33■■□□□ 1.33
CRTC3-203ENST00000558005 MROH2BQ7Z745 1585 aa23.21■■□□□ 1.31
CRTC3-203ENST00000558005 KIF21AQ7Z4S6 1674 aa23.18■■□□□ 1.3
CRTC3-203ENST00000558005 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.29
CRTC3-203ENST00000558005 MRC2Q9UBG0 1479 aa23.1■■□□□ 1.29
CRTC3-203ENST00000558005 WDR62O43379 1518 aa23.04■■□□□ 1.28
CRTC3-203ENST00000558005 CEP164Q9UPV0 1460 aa22.97■■□□□ 1.27
CRTC3-203ENST00000558005 WIZO95785 1651 aa22.9■■□□□ 1.26
CRTC3-203ENST00000558005 FANCD2Q9BXW9 1451 aa22.86■■□□□ 1.25
CRTC3-203ENST00000558005 CFTRP13569 1480 aa22.83■■□□□ 1.25
CRTC3-203ENST00000558005 TRIM41Q8WV44 630 aa22.82■■□□□ 1.24
CRTC3-203ENST00000558005 TOP2AP11388 1531 aaKnown RBP22.74■■□□□ 1.23
CRTC3-203ENST00000558005 OSCARQ8IYS5 282 aa22.71■■□□□ 1.23
CRTC3-203ENST00000558005 RSF1Q96T23 1441 aaPredicted RBP22.67■■□□□ 1.22
CRTC3-203ENST00000558005 URB2Q14146 1524 aaKnown RBP22.62■■□□□ 1.21
CRTC3-203ENST00000558005 PRDM2Q13029 1718 aa22.62■■□□□ 1.21
CRTC3-203ENST00000558005 IFT140Q96RY7 1462 aa22.54■■□□□ 1.2
CRTC3-203ENST00000558005 ABCC8Q09428 1581 aa22.49■■□□□ 1.19
CRTC3-203ENST00000558005 RIMBP3CA6NJZ7 1639 aa22.39■■□□□ 1.17
CRTC3-203ENST00000558005 RIMBP3BA6NNM3 1639 aa22.39■■□□□ 1.17
CRTC3-203ENST00000558005 RIMBP3Q9UFD9 1639 aa22.39■■□□□ 1.17
CRTC3-203ENST00000558005 TOPBP1Q92547 1522 aa22.38■■□□□ 1.17
CRTC3-203ENST00000558005 CCDC88BA6NC98 1476 aa22.38■■□□□ 1.17
CRTC3-203ENST00000558005 ZNF608Q9ULD9 1512 aaPredicted RBP22.34■■□□□ 1.17
CRTC3-203ENST00000558005 DNMBPQ6XZF7 1577 aa22.33■■□□□ 1.17
CRTC3-203ENST00000558005 ARHGEF11O15085 1522 aa22.32■■□□□ 1.16
CRTC3-203ENST00000558005 EIF4G3O43432 1585 aaKnown RBP22.31■■□□□ 1.16
CRTC3-203ENST00000558005 TARBP1Q13395 1621 aaKnown RBP22.19■■□□□ 1.14
CRTC3-203ENST00000558005 WDR97A6NE52 1622 aa22.17■■□□□ 1.14
CRTC3-203ENST00000558005 CHD1O14646 1710 aa22.14■■□□□ 1.14
CRTC3-203ENST00000558005 POLA1P09884 1462 aaPredicted RBP22.13■■□□□ 1.13
CRTC3-203ENST00000558005 AQRO60306 1485 aaKnown RBP eCLIP22.11■■□□□ 1.137e-7■■■■□ 24.7
CRTC3-203ENST00000558005 CYB5RLQ6IPT4 315 aa22.1■■□□□ 1.13
CRTC3-203ENST00000558005 ARAP1Q96P48 1450 aa22.05■■□□□ 1.12
CRTC3-203ENST00000558005 FBLN2P98095 1184 aa22.05■■□□□ 1.12
CRTC3-203ENST00000558005 SOGA1O94964 1423 aa22.04■■□□□ 1.12
CRTC3-203ENST00000558005 MAGI1Q96QZ7 1491 aaPredicted RBP22.01■■□□□ 1.11
CRTC3-203ENST00000558005 SYNJ1O43426 1573 aa21.99■■□□□ 1.11
CRTC3-203ENST00000558005 TRHP20396 242 aaPredicted RBP21.98■■□□□ 1.11
CRTC3-203ENST00000558005 SNAPC4Q5SXM2 1469 aa21.96■■□□□ 1.11
CRTC3-203ENST00000558005 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
CRTC3-203ENST00000558005 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
CRTC3-203ENST00000558005 TDRD9Q8NDG6 1382 aaKnown RBP21.95■■□□□ 1.1
CRTC3-203ENST00000558005 CLASP1Q7Z460 1538 aa21.95■■□□□ 1.1
CRTC3-203ENST00000558005 GRIN2BQ13224 1484 aa21.94■■□□□ 1.1
CRTC3-203ENST00000558005 CHMP7Q8WUX9 453 aaPredicted RBP21.92■■□□□ 1.1
CRTC3-203ENST00000558005 SYNJ2O15056 1496 aa21.9■■□□□ 1.1
CRTC3-203ENST00000558005 CUX1P39880 1505 aa21.85■■□□□ 1.09
CRTC3-203ENST00000558005 GAPVD1Q14C86 1478 aa21.79■■□□□ 1.08
CRTC3-203ENST00000558005 PBRM1Q86U86 1689 aa21.77■■□□□ 1.08
CRTC3-203ENST00000558005 ABCA10Q8WWZ4 1543 aa21.75■■□□□ 1.07
CRTC3-203ENST00000558005 ABCA5Q8WWZ7 1642 aa21.72■■□□□ 1.07
CRTC3-203ENST00000558005 WRNQ14191 1432 aaPredicted RBP eCLIP21.64■■□□□ 1.06
CRTC3-203ENST00000558005 GRIN2AQ12879 1464 aa21.63■■□□□ 1.05
CRTC3-203ENST00000558005 AEBP2Q6ZN18 517 aaPredicted RBP21.61■■□□□ 1.05
CRTC3-203ENST00000558005 ADAMTS12P58397 1594 aa21.58■■□□□ 1.05
CRTC3-203ENST00000558005 NUP160Q12769 1436 aa21.57■■□□□ 1.04
CRTC3-203ENST00000558005 FHAD1B1AJZ9 1412 aa21.55■■□□□ 1.04
CRTC3-203ENST00000558005 TOP2BQ02880 1626 aa21.51■■□□□ 1.03
CRTC3-203ENST00000558005 BIVM-ERCC5R4GMW8 1640 aa21.51■■□□□ 1.03
CRTC3-203ENST00000558005 ERICH3Q5RHP9 1530 aa21.51■■□□□ 1.03
CRTC3-203ENST00000558005 CEP170Q5SW79 1584 aa21.51■■□□□ 1.03
CRTC3-203ENST00000558005 SHROOM2Q13796 1616 aa21.5■■□□□ 1.03
CRTC3-203ENST00000558005 ERCC6L2Q5T890 1561 aa21.42■■□□□ 1.02
CRTC3-203ENST00000558005 SUPT5HO00267 1087 aaKnown RBP21.37■■□□□ 1.01
CRTC3-203ENST00000558005 PRG4Q92954 1404 aaPredicted RBP21.34■■□□□ 1.01
CRTC3-203ENST00000558005 JPH4Q96JJ6 628 aa21.29■■□□□ 1
CRTC3-203ENST00000558005 NPM1P06748 294 aaKnown RBP eCLIP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms