RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 ZNF142P52746 1687 aaPredicted RBP26.84■■□□□ 1.89
GPHN-211ENST00000556020 CEP170BQ9Y4F5 1589 aaPredicted RBP26.84■■□□□ 1.89
GPHN-211ENST00000556020 NCOA1Q15788 1441 aa26.83■■□□□ 1.89
GPHN-211ENST00000556020 CROCC2H7BZ55 1655 aa26.82■■□□□ 1.88
GPHN-211ENST00000556020 CERKQ8TCT0 537 aa26.82■■□□□ 1.88
GPHN-211ENST00000556020 FGD6Q6ZV73 1430 aa26.81■■□□□ 1.88
GPHN-211ENST00000556020 FAM135AQ9P2D6 1515 aa26.8■■□□□ 1.88
GPHN-211ENST00000556020 FBXO31Q5XUX0 539 aaPredicted RBP26.8■■□□□ 1.88
GPHN-211ENST00000556020 RNF17Q9BXT8 1623 aaKnown RBP26.79■■□□□ 1.88
GPHN-211ENST00000556020 PTPRTO14522 1441 aa26.79■■□□□ 1.88
GPHN-211ENST00000556020 EIF2AK4Q9P2K8 1649 aaKnown RBP26.79■■□□□ 1.88
GPHN-211ENST00000556020 ABCC5O15440 1437 aa26.78■■□□□ 1.88
GPHN-211ENST00000556020 PZPP20742 1482 aa26.77■■□□□ 1.88
GPHN-211ENST00000556020 NCKAP5LQ9HCH0 1330 aa26.76■■□□□ 1.87
GPHN-211ENST00000556020 DNMT1P26358 1616 aaKnown RBP26.76■■□□□ 1.87
GPHN-211ENST00000556020 DUOX2Q9NRD8 1548 aa26.75■■□□□ 1.87
GPHN-211ENST00000556020 TNRQ92752 1358 aa26.75■■□□□ 1.87
GPHN-211ENST00000556020 SHANK2Q9UPX8 1470 aa26.74■■□□□ 1.87
GPHN-211ENST00000556020 DAPK1P53355 1430 aa26.74■■□□□ 1.87
GPHN-211ENST00000556020 A2ML1A8K2U0 1454 aa26.74■■□□□ 1.87
GPHN-211ENST00000556020 TCOF1Q13428 1488 aaKnown RBP26.74■■□□□ 1.87
GPHN-211ENST00000556020 KIF15Q9NS87 1388 aa26.73■■□□□ 1.87
GPHN-211ENST00000556020 RRP7BPQ9NSQ0 103 aa26.73■■□□□ 1.87
GPHN-211ENST00000556020 ABCC3O15438 1527 aa26.72■■□□□ 1.87
GPHN-211ENST00000556020 CEP152O94986 1710 aa26.72■■□□□ 1.87
GPHN-211ENST00000556020 ZC3H13Q5T200 1668 aaKnown RBP26.72■■□□□ 1.87
GPHN-211ENST00000556020 MROH1Q8NDA8 1641 aa26.71■■□□□ 1.87
GPHN-211ENST00000556020 PLA2R1Q13018 1463 aa26.7■■□□□ 1.87
GPHN-211ENST00000556020 CHIC2Q9UKJ5 165 aa26.7■■□□□ 1.86
GPHN-211ENST00000556020 FAM50AQ14320 339 aaKnown RBP26.67■■□□□ 1.86
GPHN-211ENST00000556020 CFAP65Q6ZU64 1925 aaKnown RBP26.65■■□□□ 1.86
GPHN-211ENST00000556020 PKD2Q13563 968 aa26.65■■□□□ 1.86
GPHN-211ENST00000556020 ERBINQ96RT1 1412 aa26.65■■□□□ 1.86
GPHN-211ENST00000556020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.63■■□□□ 1.85
GPHN-211ENST00000556020 LTBP4Q8N2S1 1624 aa26.62■■□□□ 1.85
GPHN-211ENST00000556020 ANKRD30AQ9BXX3 1397 aa26.62■■□□□ 1.85
GPHN-211ENST00000556020 POLR1AO95602 1720 aaPredicted RBP26.61■■□□□ 1.85
GPHN-211ENST00000556020 PRDM15P57071 1507 aaPredicted RBP26.6■■□□□ 1.85
GPHN-211ENST00000556020 NLRP1Q9C000 1473 aa26.6■■□□□ 1.85
GPHN-211ENST00000556020 SPATA31D1Q6ZQQ2 1576 aa26.58■■□□□ 1.85
GPHN-211ENST00000556020 UGGT1Q9NYU2 1555 aa26.58■■□□□ 1.85
GPHN-211ENST00000556020 ERVK-7P63135 1459 aa26.58■■□□□ 1.85
GPHN-211ENST00000556020 ZNF335Q9H4Z2 1342 aaPredicted RBP26.58■■□□□ 1.85
GPHN-211ENST00000556020 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.58■■□□□ 1.84
GPHN-211ENST00000556020 DEPDC5O75140 1603 aa26.57■■□□□ 1.84
GPHN-211ENST00000556020 PPARGC1BQ86YN6 1023 aaKnown RBP26.55■■□□□ 1.84
GPHN-211ENST00000556020 THEMISQ8N1K5 641 aaPredicted RBP26.54■■□□□ 1.84
GPHN-211ENST00000556020 KANK1Q14678 1352 aa26.54■■□□□ 1.84
GPHN-211ENST00000556020 NEURL4Q96JN8 1562 aa26.54■■□□□ 1.84
GPHN-211ENST00000556020 ADGRL2O95490 1459 aa26.51■■□□□ 1.83
GPHN-211ENST00000556020 ANKLE2Q86XL3 938 aa26.51■■□□□ 1.83
GPHN-211ENST00000556020 ARHGAP31Q2M1Z3 1444 aa26.47■■□□□ 1.83
GPHN-211ENST00000556020 UBR1Q8IWV7 1749 aa26.46■■□□□ 1.83
GPHN-211ENST00000556020 IQSEC2Q5JU85 1478 aa26.45■■□□□ 1.82
GPHN-211ENST00000556020 NPHP4O75161 1426 aaPredicted RBP26.43■■□□□ 1.82
GPHN-211ENST00000556020 ANKRD50Q9ULJ7 1429 aa26.43■■□□□ 1.82
GPHN-211ENST00000556020 VWDEQ8N2E2 1590 aa26.42■■□□□ 1.82
GPHN-211ENST00000556020 IQGAP1P46940 1657 aa26.41■■□□□ 1.82
GPHN-211ENST00000556020 LMTK2Q8IWU2 1503 aa26.41■■□□□ 1.82
GPHN-211ENST00000556020 ITGAEP38570 1179 aa26.41■■□□□ 1.82
GPHN-211ENST00000556020 PIK3C2BO00750 1634 aa26.39■■□□□ 1.82
GPHN-211ENST00000556020 MED14O60244 1454 aa26.38■■□□□ 1.81
GPHN-211ENST00000556020 EFCAB6Q5THR3 1501 aa26.38■■□□□ 1.81
GPHN-211ENST00000556020 UBAP1LF5GYI3 381 aa26.35■■□□□ 1.81
GPHN-211ENST00000556020 STAG3Q9UJ98 1225 aa26.35■■□□□ 1.81
GPHN-211ENST00000556020 SYNMO15061 1565 aa26.33■■□□□ 1.81
GPHN-211ENST00000556020 SCAF11Q99590 1463 aaKnown RBP26.32■■□□□ 1.8
GPHN-211ENST00000556020 CPS1P31327 1500 aa26.32■■□□□ 1.8
GPHN-211ENST00000556020 TXNDC2Q86VQ3 553 aa26.31■■□□□ 1.8
GPHN-211ENST00000556020 UNC13BO14795 1591 aa26.3■■□□□ 1.8
GPHN-211ENST00000556020 ROCK1Q13464 1354 aa26.3■■□□□ 1.8
GPHN-211ENST00000556020 SLIT1O75093 1534 aa26.29■■□□□ 1.8
GPHN-211ENST00000556020 TET3O43151 1660 aa26.29■■□□□ 1.8
GPHN-211ENST00000556020 LTKP29376 864 aa26.29■■□□□ 1.8
GPHN-211ENST00000556020 IDI1Q13907 227 aa26.29■■□□□ 1.8
GPHN-211ENST00000556020 ARHGAP23Q9P227 1491 aa26.29■■□□□ 1.8
GPHN-211ENST00000556020 NOS1P29475 1434 aa26.28■■□□□ 1.8
GPHN-211ENST00000556020 EID1Q9Y6B2 187 aa26.27■■□□□ 1.8
GPHN-211ENST00000556020 GCC2Q8IWJ2 1684 aa26.26■■□□□ 1.79
GPHN-211ENST00000556020 STRCP1A6NGW2 1772 aa26.25■■□□□ 1.79
GPHN-211ENST00000556020 KDM5AP29375 1690 aaKnown RBP26.25■■□□□ 1.79
GPHN-211ENST00000556020 TMEM2Q9UHN6 1383 aa26.24■■□□□ 1.79
GPHN-211ENST00000556020 RPRD2Q5VT52 1461 aaKnown RBP26.23■■□□□ 1.79
GPHN-211ENST00000556020 SCAF1Q9H7N4 1312 aaKnown RBP26.23■■□□□ 1.79
GPHN-211ENST00000556020 ADGRB3O60242 1522 aa26.23■■□□□ 1.79
GPHN-211ENST00000556020 E9PCH4 1651 aa26.2■■□□□ 1.78
GPHN-211ENST00000556020 SLC52A1Q9NWF4 448 aa26.2■■□□□ 1.78
GPHN-211ENST00000556020 IQGAP3Q86VI3 1631 aa26.2■■□□□ 1.78
GPHN-211ENST00000556020 PIP4K2BP78356 416 aa26.19■■□□□ 1.78
GPHN-211ENST00000556020 MYO5BQ9ULV0 1848 aa26.18■■□□□ 1.78
GPHN-211ENST00000556020 NUP155O75694 1391 aa26.17■■□□□ 1.78
GPHN-211ENST00000556020 RRBP1Q9P2E9 1410 aaKnown RBP26.15■■□□□ 1.78
GPHN-211ENST00000556020 LRRC7Q96NW7 1537 aa26.15■■□□□ 1.78
GPHN-211ENST00000556020 TOM1O60784 492 aa26.15■■□□□ 1.78
GPHN-211ENST00000556020 SENP3Q9H4L4 574 aaPredicted RBP26.15■■□□□ 1.78
GPHN-211ENST00000556020 CHGAP10645 457 aaKnown RBP26.13■■□□□ 1.77
GPHN-211ENST00000556020 BCANQ96GW7 911 aa26.12■■□□□ 1.77
GPHN-211ENST00000556020 DISP3Q9P2K9 1392 aa26.11■■□□□ 1.77
GPHN-211ENST00000556020 SLC26A8Q96RN1 970 aa26.1■■□□□ 1.77
GPHN-211ENST00000556020 TMEM131LA2VDJ0 1609 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms