RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 ZNF142P52746 1687 aaPredicted RBP21.58■■□□□ 1.05
PCNX4-209ENST00000555569 CROCC2H7BZ55 1655 aa21.56■■□□□ 1.04
PCNX4-209ENST00000555569 NCOA1Q15788 1441 aa21.56■■□□□ 1.04
PCNX4-209ENST00000555569 FGD6Q6ZV73 1430 aa21.55■■□□□ 1.04
PCNX4-209ENST00000555569 CAMSAP1Q5T5Y3 1602 aa21.55■■□□□ 1.04
PCNX4-209ENST00000555569 RNF17Q9BXT8 1623 aaKnown RBP21.55■■□□□ 1.04
PCNX4-209ENST00000555569 EIF2AK4Q9P2K8 1649 aaKnown RBP21.55■■□□□ 1.04
PCNX4-209ENST00000555569 WASHC2CQ9Y4E1 1318 aa21.55■■□□□ 1.04
PCNX4-209ENST00000555569 CEP170BQ9Y4F5 1589 aaPredicted RBP21.54■■□□□ 1.04
PCNX4-209ENST00000555569 PTPRTO14522 1441 aa21.54■■□□□ 1.04
PCNX4-209ENST00000555569 ABCC5O15440 1437 aa21.54■■□□□ 1.04
PCNX4-209ENST00000555569 TCOF1Q13428 1488 aaKnown RBP21.53■■□□□ 1.04
PCNX4-209ENST00000555569 SHANK2Q9UPX8 1470 aa21.53■■□□□ 1.04
PCNX4-209ENST00000555569 PZPP20742 1482 aa21.52■■□□□ 1.04
PCNX4-209ENST00000555569 DUOX2Q9NRD8 1548 aa21.52■■□□□ 1.04
PCNX4-209ENST00000555569 DNMT1P26358 1616 aaKnown RBP21.51■■□□□ 1.03
PCNX4-209ENST00000555569 DAPK1P53355 1430 aa21.5■■□□□ 1.03
PCNX4-209ENST00000555569 POTEDQ86YR6 584 aa21.5■■□□□ 1.03
PCNX4-209ENST00000555569 CERKQ8TCT0 537 aa21.5■■□□□ 1.03
PCNX4-209ENST00000555569 ZC3H13Q5T200 1668 aaKnown RBP21.49■■□□□ 1.03
PCNX4-209ENST00000555569 TNRQ92752 1358 aa21.48■■□□□ 1.03
PCNX4-209ENST00000555569 KIF15Q9NS87 1388 aa21.48■■□□□ 1.03
PCNX4-209ENST00000555569 A2ML1A8K2U0 1454 aa21.48■■□□□ 1.03
PCNX4-209ENST00000555569 FBXO31Q5XUX0 539 aaPredicted RBP21.48■■□□□ 1.03
PCNX4-209ENST00000555569 MROH1Q8NDA8 1641 aa21.47■■□□□ 1.03
PCNX4-209ENST00000555569 PLA2R1Q13018 1463 aa21.47■■□□□ 1.03
PCNX4-209ENST00000555569 ABCC3O15438 1527 aa21.47■■□□□ 1.03
PCNX4-209ENST00000555569 RRP7BPQ9NSQ0 103 aa21.45■■□□□ 1.02
PCNX4-209ENST00000555569 NCKAP5LQ9HCH0 1330 aa21.45■■□□□ 1.02
PCNX4-209ENST00000555569 CEP152O94986 1710 aa21.44■■□□□ 1.02
PCNX4-209ENST00000555569 ERBINQ96RT1 1412 aa21.44■■□□□ 1.02
PCNX4-209ENST00000555569 PKD2Q13563 968 aa21.43■■□□□ 1.02
PCNX4-209ENST00000555569 ANKRD30AQ9BXX3 1397 aa21.41■■□□□ 1.02
PCNX4-209ENST00000555569 CHIC2Q9UKJ5 165 aa21.41■■□□□ 1.02
PCNX4-209ENST00000555569 CFAP65Q6ZU64 1925 aaKnown RBP21.4■■□□□ 1.02
PCNX4-209ENST00000555569 PRDM15P57071 1507 aaPredicted RBP21.39■■□□□ 1.02
PCNX4-209ENST00000555569 NLRP1Q9C000 1473 aa21.39■■□□□ 1.02
PCNX4-209ENST00000555569 FAM50AQ14320 339 aaKnown RBP21.39■■□□□ 1.01
PCNX4-209ENST00000555569 PHF23Q9BUL5 403 aaPredicted RBP21.39■■□□□ 1.01
PCNX4-209ENST00000555569 SPATA31D1Q6ZQQ2 1576 aa21.39■■□□□ 1.01
PCNX4-209ENST00000555569 DEPDC5O75140 1603 aa21.37■■□□□ 1.01
PCNX4-209ENST00000555569 LTBP4Q8N2S1 1624 aa21.37■■□□□ 1.01
PCNX4-209ENST00000555569 POLR1AO95602 1720 aaPredicted RBP21.37■■□□□ 1.01
PCNX4-209ENST00000555569 ERVK-7P63135 1459 aa21.37■■□□□ 1.01
PCNX4-209ENST00000555569 ADGRL2O95490 1459 aa21.36■■□□□ 1.01
PCNX4-209ENST00000555569 UGGT1Q9NYU2 1555 aa21.35■■□□□ 1.01
PCNX4-209ENST00000555569 THEMISQ8N1K5 641 aaPredicted RBP21.33■■□□□ 1.01
PCNX4-209ENST00000555569 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.33■■□□□ 1.01
PCNX4-209ENST00000555569 KANK1Q14678 1352 aa21.32■■□□□ 1
PCNX4-209ENST00000555569 ARHGAP31Q2M1Z3 1444 aa21.31■■□□□ 1
PCNX4-209ENST00000555569 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.31■■□□□ 1
PCNX4-209ENST00000555569 NEURL4Q96JN8 1562 aa21.31■■□□□ 1
PCNX4-209ENST00000555569 ZNF335Q9H4Z2 1342 aaPredicted RBP21.3■■□□□ 1
PCNX4-209ENST00000555569 ANKLE2Q86XL3 938 aa21.29■■□□□ 1
PCNX4-209ENST00000555569 VWDEQ8N2E2 1590 aa21.28■■□□□ 1
PCNX4-209ENST00000555569 IQSEC2Q5JU85 1478 aa21.28■■□□□ 1
PCNX4-209ENST00000555569 LMTK2Q8IWU2 1503 aa21.27■■□□□ 1
PCNX4-209ENST00000555569 UBR1Q8IWV7 1749 aa21.25■□□□□ 0.99
PCNX4-209ENST00000555569 ANKRD50Q9ULJ7 1429 aa21.25■□□□□ 0.99
PCNX4-209ENST00000555569 PPARGC1BQ86YN6 1023 aaKnown RBP21.24■□□□□ 0.99
PCNX4-209ENST00000555569 MED14O60244 1454 aa21.22■□□□□ 0.99
PCNX4-209ENST00000555569 NPHP4O75161 1426 aaPredicted RBP21.21■□□□□ 0.99
PCNX4-209ENST00000555569 EFCAB6Q5THR3 1501 aa21.2■□□□□ 0.98
PCNX4-209ENST00000555569 IQGAP1P46940 1657 aa21.2■□□□□ 0.98
PCNX4-209ENST00000555569 ROCK1Q13464 1354 aa21.19■□□□□ 0.98
PCNX4-209ENST00000555569 PIK3C2BO00750 1634 aa21.18■□□□□ 0.98
PCNX4-209ENST00000555569 SYNMO15061 1565 aa21.16■□□□□ 0.98
PCNX4-209ENST00000555569 UNC13BO14795 1591 aa21.15■□□□□ 0.98
PCNX4-209ENST00000555569 SLIT1O75093 1534 aa21.15■□□□□ 0.98
PCNX4-209ENST00000555569 CPS1P31327 1500 aa21.15■□□□□ 0.98
PCNX4-209ENST00000555569 ARHGAP23Q9P227 1491 aa21.15■□□□□ 0.98
PCNX4-209ENST00000555569 TET3O43151 1660 aa21.15■□□□□ 0.98
PCNX4-209ENST00000555569 SCAF11Q99590 1463 aaKnown RBP21.14■□□□□ 0.98
PCNX4-209ENST00000555569 NOS1P29475 1434 aa21.14■□□□□ 0.98
PCNX4-209ENST00000555569 ITGAEP38570 1179 aa21.14■□□□□ 0.97
PCNX4-209ENST00000555569 KDM5AP29375 1690 aaKnown RBP21.14■□□□□ 0.97
PCNX4-209ENST00000555569 STAG3Q9UJ98 1225 aa21.13■□□□□ 0.97
PCNX4-209ENST00000555569 RPRD2Q5VT52 1461 aaKnown RBP21.13■□□□□ 0.97
PCNX4-209ENST00000555569 GCC2Q8IWJ2 1684 aa21.12■□□□□ 0.97
PCNX4-209ENST00000555569 IDI1Q13907 227 aa21.12■□□□□ 0.97
PCNX4-209ENST00000555569 UBAP1LF5GYI3 381 aa21.11■□□□□ 0.97
PCNX4-209ENST00000555569 LTKP29376 864 aa21.11■□□□□ 0.97
PCNX4-209ENST00000555569 TXNDC2Q86VQ3 553 aa21.11■□□□□ 0.97
PCNX4-209ENST00000555569 EID1Q9Y6B2 187 aa21.1■□□□□ 0.97
PCNX4-209ENST00000555569 TMEM2Q9UHN6 1383 aa21.1■□□□□ 0.97
PCNX4-209ENST00000555569 ADGRB3O60242 1522 aa21.08■□□□□ 0.96
PCNX4-209ENST00000555569 RRBP1Q9P2E9 1410 aaKnown RBP21.07■□□□□ 0.96
PCNX4-209ENST00000555569 SLC52A1Q9NWF4 448 aa21.07■□□□□ 0.96
PCNX4-209ENST00000555569 STRCP1A6NGW2 1772 aa21.07■□□□□ 0.96
PCNX4-209ENST00000555569 IQGAP3Q86VI3 1631 aa21.07■□□□□ 0.96
PCNX4-209ENST00000555569 E9PCH4 1651 aa21.05■□□□□ 0.96
PCNX4-209ENST00000555569 MYO5BQ9ULV0 1848 aa21.03■□□□□ 0.96
PCNX4-209ENST00000555569 NUP155O75694 1391 aa21.02■□□□□ 0.96
PCNX4-209ENST00000555569 TOM1O60784 492 aa21■□□□□ 0.95
PCNX4-209ENST00000555569 LRRC7Q96NW7 1537 aa20.99■□□□□ 0.95
PCNX4-209ENST00000555569 TMEM131LA2VDJ0 1609 aa20.97■□□□□ 0.95
PCNX4-209ENST00000555569 SCAF1Q9H7N4 1312 aaKnown RBP20.95■□□□□ 0.94
PCNX4-209ENST00000555569 ZFYVE9O95405 1425 aa20.95■□□□□ 0.94
PCNX4-209ENST00000555569 PIP4K2BP78356 416 aa20.94■□□□□ 0.94
PCNX4-209ENST00000555569 CHGAP10645 457 aaKnown RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms