RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 NCKAP5LQ9HCH0 1330 aa24.93■■□□□ 1.58
ARHGEF40-205ENST00000555052 A2ML1A8K2U0 1454 aa24.92■■□□□ 1.58
ARHGEF40-205ENST00000555052 IQSEC2Q5JU85 1478 aa24.92■■□□□ 1.58
ARHGEF40-205ENST00000555052 PZPP20742 1482 aa24.91■■□□□ 1.58
ARHGEF40-205ENST00000555052 KANK4Q5T7N3 995 aaPredicted RBP24.91■■□□□ 1.58
ARHGEF40-205ENST00000555052 MAST1Q9Y2H9 1570 aa24.9■■□□□ 1.58
ARHGEF40-205ENST00000555052 PKD2Q13563 968 aa24.9■■□□□ 1.58
ARHGEF40-205ENST00000555052 DNMT1P26358 1616 aaKnown RBP24.9■■□□□ 1.58
ARHGEF40-205ENST00000555052 TSPY4P0CV99 314 aa24.88■■□□□ 1.57
ARHGEF40-205ENST00000555052 TSPY10P0CW01 314 aa24.88■■□□□ 1.57
ARHGEF40-205ENST00000555052 MYOM3Q5VTT5 1437 aa24.87■■□□□ 1.57
ARHGEF40-205ENST00000555052 MIA2Q96PC5 1412 aa24.87■■□□□ 1.57
ARHGEF40-205ENST00000555052 TNRQ92752 1358 aa24.87■■□□□ 1.57
ARHGEF40-205ENST00000555052 FBXO31Q5XUX0 539 aaPredicted RBP24.86■■□□□ 1.57
ARHGEF40-205ENST00000555052 RNF17Q9BXT8 1623 aaKnown RBP24.86■■□□□ 1.57
ARHGEF40-205ENST00000555052 WASHC2CQ9Y4E1 1318 aa24.85■■□□□ 1.57
ARHGEF40-205ENST00000555052 ZNF335Q9H4Z2 1342 aaPredicted RBP24.84■■□□□ 1.57
ARHGEF40-205ENST00000555052 EIF2AK4Q9P2K8 1649 aaKnown RBP24.8■■□□□ 1.56
ARHGEF40-205ENST00000555052 ABCC3O15438 1527 aa24.79■■□□□ 1.56
ARHGEF40-205ENST00000555052 NEURL4Q96JN8 1562 aa24.79■■□□□ 1.56
ARHGEF40-205ENST00000555052 NLRP1Q9C000 1473 aa24.78■■□□□ 1.56
ARHGEF40-205ENST00000555052 MROH1Q8NDA8 1641 aa24.78■■□□□ 1.56
ARHGEF40-205ENST00000555052 POLR1AO95602 1720 aaPredicted RBP24.78■■□□□ 1.56
ARHGEF40-205ENST00000555052 ZC3H13Q5T200 1668 aaKnown RBP24.77■■□□□ 1.56
ARHGEF40-205ENST00000555052 SPATA31D1Q6ZQQ2 1576 aa24.73■■□□□ 1.55
ARHGEF40-205ENST00000555052 DUOX2Q9NRD8 1548 aa24.73■■□□□ 1.55
ARHGEF40-205ENST00000555052 SHANK2Q9UPX8 1470 aa24.73■■□□□ 1.55
ARHGEF40-205ENST00000555052 UGGT1Q9NYU2 1555 aa24.71■■□□□ 1.55
ARHGEF40-205ENST00000555052 CROCC2H7BZ55 1655 aa24.71■■□□□ 1.55
ARHGEF40-205ENST00000555052 ABCC5O15440 1437 aa24.7■■□□□ 1.55
ARHGEF40-205ENST00000555052 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.7■■□□□ 1.55
ARHGEF40-205ENST00000555052 PTPN23Q9H3S7 1636 aa24.7■■□□□ 1.54
ARHGEF40-205ENST00000555052 ERVK-7P63135 1459 aa24.7■■□□□ 1.54
ARHGEF40-205ENST00000555052 THEMISQ8N1K5 641 aaPredicted RBP24.68■■□□□ 1.54
ARHGEF40-205ENST00000555052 DEPDC5O75140 1603 aa24.68■■□□□ 1.54
ARHGEF40-205ENST00000555052 KIF15Q9NS87 1388 aa24.67■■□□□ 1.54
ARHGEF40-205ENST00000555052 CEP152O94986 1710 aa24.67■■□□□ 1.54
ARHGEF40-205ENST00000555052 MED14O60244 1454 aa24.67■■□□□ 1.54
ARHGEF40-205ENST00000555052 PRDM15P57071 1507 aaPredicted RBP24.66■■□□□ 1.54
ARHGEF40-205ENST00000555052 ANKLE2Q86XL3 938 aa24.66■■□□□ 1.54
ARHGEF40-205ENST00000555052 FGD6Q6ZV73 1430 aa24.65■■□□□ 1.54
ARHGEF40-205ENST00000555052 ERBINQ96RT1 1412 aa24.65■■□□□ 1.54
ARHGEF40-205ENST00000555052 UBAP1LF5GYI3 381 aa24.64■■□□□ 1.54
ARHGEF40-205ENST00000555052 CPS1P31327 1500 aa24.64■■□□□ 1.53
ARHGEF40-205ENST00000555052 VWDEQ8N2E2 1590 aa24.63■■□□□ 1.53
ARHGEF40-205ENST00000555052 DAPK1P53355 1430 aa24.63■■□□□ 1.53
ARHGEF40-205ENST00000555052 APLP2Q06481 763 aa24.63■■□□□ 1.53
ARHGEF40-205ENST00000555052 DISP3Q9P2K9 1392 aa24.63■■□□□ 1.53
ARHGEF40-205ENST00000555052 NPHP4O75161 1426 aaPredicted RBP24.62■■□□□ 1.53
ARHGEF40-205ENST00000555052 ARHGAP31Q2M1Z3 1444 aa24.61■■□□□ 1.53
ARHGEF40-205ENST00000555052 CFAP65Q6ZU64 1925 aaKnown RBP24.6■■□□□ 1.53
ARHGEF40-205ENST00000555052 RRP7BPQ9NSQ0 103 aa24.59■■□□□ 1.53
ARHGEF40-205ENST00000555052 IQGAP1P46940 1657 aa24.59■■□□□ 1.53
ARHGEF40-205ENST00000555052 UBR1Q8IWV7 1749 aa24.57■■□□□ 1.52
ARHGEF40-205ENST00000555052 ILDR2Q71H61 639 aa24.54■■□□□ 1.52
ARHGEF40-205ENST00000555052 ANKRD30AQ9BXX3 1397 aa24.52■■□□□ 1.52
ARHGEF40-205ENST00000555052 ARHGAP23Q9P227 1491 aa24.51■■□□□ 1.51
ARHGEF40-205ENST00000555052 SLIT1O75093 1534 aa24.51■■□□□ 1.51
ARHGEF40-205ENST00000555052 LMTK2Q8IWU2 1503 aa24.51■■□□□ 1.51
ARHGEF40-205ENST00000555052 SCAF11Q99590 1463 aaKnown RBP24.5■■□□□ 1.51
ARHGEF40-205ENST00000555052 STRCP1A6NGW2 1772 aa24.49■■□□□ 1.51
ARHGEF40-205ENST00000555052 ADGRL2O95490 1459 aa24.49■■□□□ 1.51
ARHGEF40-205ENST00000555052 KANK1Q14678 1352 aa24.48■■□□□ 1.51
ARHGEF40-205ENST00000555052 CHIC2Q9UKJ5 165 aa24.48■■□□□ 1.51
ARHGEF40-205ENST00000555052 ALKQ9UM73 1620 aa24.47■■□□□ 1.51
ARHGEF40-205ENST00000555052 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.47■■□□□ 1.515e-7■■■□□ 15.2
ARHGEF40-205ENST00000555052 TOM1O60784 492 aa24.46■■□□□ 1.51
ARHGEF40-205ENST00000555052 LTKP29376 864 aa24.45■■□□□ 1.5
ARHGEF40-205ENST00000555052 PIK3C2BO00750 1634 aa24.45■■□□□ 1.5
ARHGEF40-205ENST00000555052 SYNMO15061 1565 aa24.44■■□□□ 1.5
ARHGEF40-205ENST00000555052 LRRC7Q96NW7 1537 aa24.44■■□□□ 1.5
ARHGEF40-205ENST00000555052 EFCAB6Q5THR3 1501 aa24.42■■□□□ 1.5
ARHGEF40-205ENST00000555052 KDM5AP29375 1690 aaKnown RBP24.42■■□□□ 1.5
ARHGEF40-205ENST00000555052 HSPA1LP34931 641 aa24.41■■□□□ 1.5
ARHGEF40-205ENST00000555052 PIP4K2BP78356 416 aa24.41■■□□□ 1.5
ARHGEF40-205ENST00000555052 TMEM2Q9UHN6 1383 aa24.4■■□□□ 1.5
ARHGEF40-205ENST00000555052 SCAF1Q9H7N4 1312 aaKnown RBP24.39■■□□□ 1.5
ARHGEF40-205ENST00000555052 NOS1P29475 1434 aa24.39■■□□□ 1.5
ARHGEF40-205ENST00000555052 TXNDC2Q86VQ3 553 aa24.39■■□□□ 1.49
ARHGEF40-205ENST00000555052 SOCS7O14512 581 aa24.37■■□□□ 1.49
ARHGEF40-205ENST00000555052 IDI1Q13907 227 aa24.36■■□□□ 1.49
ARHGEF40-205ENST00000555052 FAM50AQ14320 339 aaKnown RBP24.36■■□□□ 1.49
ARHGEF40-205ENST00000555052 ANKRD50Q9ULJ7 1429 aa24.35■■□□□ 1.49
ARHGEF40-205ENST00000555052 EID1Q9Y6B2 187 aa24.35■■□□□ 1.49
ARHGEF40-205ENST00000555052 ADGRB3O60242 1522 aa24.32■■□□□ 1.48
ARHGEF40-205ENST00000555052 RPRD2Q5VT52 1461 aaKnown RBP24.32■■□□□ 1.48
ARHGEF40-205ENST00000555052 STAG3Q9UJ98 1225 aa24.31■■□□□ 1.48
ARHGEF40-205ENST00000555052 MED1Q15648 1581 aaPredicted RBP24.3■■□□□ 1.48
ARHGEF40-205ENST00000555052 XIRP1Q702N8 1843 aaKnown RBP24.3■■□□□ 1.48
ARHGEF40-205ENST00000555052 TET3O43151 1660 aa24.28■■□□□ 1.48
ARHGEF40-205ENST00000555052 SLC52A1Q9NWF4 448 aa24.28■■□□□ 1.48
ARHGEF40-205ENST00000555052 UNC13BO14795 1591 aa24.27■■□□□ 1.48
ARHGEF40-205ENST00000555052 ROCK1Q13464 1354 aa24.24■■□□□ 1.47
ARHGEF40-205ENST00000555052 GCC2Q8IWJ2 1684 aa24.23■■□□□ 1.47
ARHGEF40-205ENST00000555052 ZFYVE9O95405 1425 aa24.21■■□□□ 1.47
ARHGEF40-205ENST00000555052 MYO5BQ9ULV0 1848 aa24.19■■□□□ 1.46
ARHGEF40-205ENST00000555052 KCNA6P17658 529 aa24.19■■□□□ 1.46
ARHGEF40-205ENST00000555052 SLC26A8Q96RN1 970 aa24.19■■□□□ 1.46
ARHGEF40-205ENST00000555052 NWD1Q149M9 1564 aa24.19■■□□□ 1.46
ARHGEF40-205ENST00000555052 TMEM94Q12767 1356 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms