RNA–Protein interactions for RNA: ENST00000553733.1

CLMN-202, Transcript of calmin, humanhuman

TSL 4

Gene CLMN, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-202ENST00000553733 ZC3H13Q5T200 1668 aaKnown RBP28.81■■■□□ 2.2
CLMN-202ENST00000553733 DNMT1P26358 1616 aaKnown RBP28.8■■■□□ 2.2
CLMN-202ENST00000553733 FBXO41Q8TF61 875 aa28.79■■■□□ 2.2
CLMN-202ENST00000553733 CEP152O94986 1710 aa28.79■■■□□ 2.2
CLMN-202ENST00000553733 SHANK2Q9UPX8 1470 aa28.77■■■□□ 2.2
CLMN-202ENST00000553733 PPP6R1Q9UPN7 881 aa28.76■■■□□ 2.19
CLMN-202ENST00000553733 PZPP20742 1482 aa28.76■■■□□ 2.19
CLMN-202ENST00000553733 TCOF1Q13428 1488 aaKnown RBP28.75■■■□□ 2.19
CLMN-202ENST00000553733 KIF3BO15066 747 aa28.75■■■□□ 2.19
CLMN-202ENST00000553733 PTPRTO14522 1441 aa28.75■■■□□ 2.19
CLMN-202ENST00000553733 POLR1AO95602 1720 aaPredicted RBP28.73■■■□□ 2.19
CLMN-202ENST00000553733 ABCC3O15438 1527 aa28.73■■■□□ 2.19
CLMN-202ENST00000553733 FGD6Q6ZV73 1430 aa28.72■■■□□ 2.19
CLMN-202ENST00000553733 PLA2R1Q13018 1463 aa28.72■■■□□ 2.19
CLMN-202ENST00000553733 DUOX2Q9NRD8 1548 aa28.71■■■□□ 2.19
CLMN-202ENST00000553733 TSPY4P0CV99 314 aa28.71■■■□□ 2.19
CLMN-202ENST00000553733 TSPY10P0CW01 314 aa28.71■■■□□ 2.19
CLMN-202ENST00000553733 ABCC5O15440 1437 aa28.7■■■□□ 2.19
CLMN-202ENST00000553733 A2ML1A8K2U0 1454 aa28.7■■■□□ 2.18
CLMN-202ENST00000553733 LTBP4Q8N2S1 1624 aa28.69■■■□□ 2.18
CLMN-202ENST00000553733 DEPDC5O75140 1603 aa28.68■■■□□ 2.18
CLMN-202ENST00000553733 PRDM15P57071 1507 aaPredicted RBP28.68■■■□□ 2.18
CLMN-202ENST00000553733 DAPK1P53355 1430 aa28.68■■■□□ 2.18
CLMN-202ENST00000553733 CFAP65Q6ZU64 1925 aaKnown RBP28.65■■■□□ 2.18
CLMN-202ENST00000553733 CERKQ8TCT0 537 aa28.65■■■□□ 2.18
CLMN-202ENST00000553733 APLP2Q06481 763 aa28.64■■■□□ 2.18
CLMN-202ENST00000553733 DMRT2Q9Y5R5 561 aa28.64■■■□□ 2.18
CLMN-202ENST00000553733 SPATA31D1Q6ZQQ2 1576 aa28.63■■■□□ 2.17
CLMN-202ENST00000553733 NEURL4Q96JN8 1562 aa28.62■■■□□ 2.17
CLMN-202ENST00000553733 TNRQ92752 1358 aa28.62■■■□□ 2.17
CLMN-202ENST00000553733 FBXO31Q5XUX0 539 aaPredicted RBP28.61■■■□□ 2.17
CLMN-202ENST00000553733 KIF15Q9NS87 1388 aa28.61■■■□□ 2.17
CLMN-202ENST00000553733 WASHC2CQ9Y4E1 1318 aa28.6■■■□□ 2.17
CLMN-202ENST00000553733 ERBINQ96RT1 1412 aa28.6■■■□□ 2.17
CLMN-202ENST00000553733 NCKAP5LQ9HCH0 1330 aa28.57■■■□□ 2.16
CLMN-202ENST00000553733 ERVK-7P63135 1459 aa28.55■■■□□ 2.16
CLMN-202ENST00000553733 NLRP1Q9C000 1473 aa28.54■■■□□ 2.16
CLMN-202ENST00000553733 UGGT1Q9NYU2 1555 aa28.52■■■□□ 2.16
CLMN-202ENST00000553733 UBR1Q8IWV7 1749 aa28.52■■■□□ 2.16
CLMN-202ENST00000553733 ADGRL2O95490 1459 aa28.51■■■□□ 2.15
CLMN-202ENST00000553733 VWDEQ8N2E2 1590 aa28.5■■■□□ 2.15
CLMN-202ENST00000553733 PKD2Q13563 968 aa28.47■■■□□ 2.15
CLMN-202ENST00000553733 IQSEC2Q5JU85 1478 aa28.46■■■□□ 2.15
CLMN-202ENST00000553733 RRP7BPQ9NSQ0 103 aa28.46■■■□□ 2.15
CLMN-202ENST00000553733 IQGAP1P46940 1657 aa28.44■■■□□ 2.14
CLMN-202ENST00000553733 ZNF335Q9H4Z2 1342 aaPredicted RBP28.43■■■□□ 2.14
CLMN-202ENST00000553733 ARHGAP31Q2M1Z3 1444 aa28.43■■■□□ 2.14
CLMN-202ENST00000553733 ANKRD30AQ9BXX3 1397 aa28.42■■■□□ 2.14
CLMN-202ENST00000553733 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.42■■■□□ 2.14
CLMN-202ENST00000553733 LMTK2Q8IWU2 1503 aa28.42■■■□□ 2.14
CLMN-202ENST00000553733 PIK3C2BO00750 1634 aa28.4■■■□□ 2.14
CLMN-202ENST00000553733 CHIC2Q9UKJ5 165 aa28.39■■■□□ 2.14
CLMN-202ENST00000553733 EFCAB6Q5THR3 1501 aa28.38■■■□□ 2.13
CLMN-202ENST00000553733 MED14O60244 1454 aa28.38■■■□□ 2.13
CLMN-202ENST00000553733 STRCP1A6NGW2 1772 aa28.37■■■□□ 2.13
CLMN-202ENST00000553733 SYNMO15061 1565 aa28.37■■■□□ 2.13
CLMN-202ENST00000553733 UNC13BO14795 1591 aa28.34■■■□□ 2.13
CLMN-202ENST00000553733 KDM5AP29375 1690 aaKnown RBP28.33■■■□□ 2.13
CLMN-202ENST00000553733 FAM50AQ14320 339 aaKnown RBP28.32■■■□□ 2.12
CLMN-202ENST00000553733 NPHP4O75161 1426 aaPredicted RBP28.31■■■□□ 2.12
CLMN-202ENST00000553733 GCC2Q8IWJ2 1684 aa28.31■■■□□ 2.12
CLMN-202ENST00000553733 TET3O43151 1660 aa28.3■■■□□ 2.12
CLMN-202ENST00000553733 SLIT1O75093 1534 aa28.29■■■□□ 2.12
CLMN-202ENST00000553733 ARHGAP23Q9P227 1491 aa28.28■■■□□ 2.12
CLMN-202ENST00000553733 ANKRD50Q9ULJ7 1429 aa28.28■■■□□ 2.12
CLMN-202ENST00000553733 THEMISQ8N1K5 641 aaPredicted RBP28.28■■■□□ 2.12
CLMN-202ENST00000553733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.28■■■□□ 2.12
CLMN-202ENST00000553733 CPS1P31327 1500 aa28.28■■■□□ 2.12
CLMN-202ENST00000553733 MYO5BQ9ULV0 1848 aa28.27■■■□□ 2.12
CLMN-202ENST00000553733 KANK1Q14678 1352 aa28.27■■■□□ 2.12
CLMN-202ENST00000553733 ANKLE2Q86XL3 938 aa28.24■■■□□ 2.11
CLMN-202ENST00000553733 SCAF11Q99590 1463 aaKnown RBP28.23■■■□□ 2.11
CLMN-202ENST00000553733 NOS1P29475 1434 aa28.22■■■□□ 2.11
CLMN-202ENST00000553733 E9PCH4 1651 aa28.22■■■□□ 2.11
CLMN-202ENST00000553733 ADGRB3O60242 1522 aa28.21■■■□□ 2.11
CLMN-202ENST00000553733 IQGAP3Q86VI3 1631 aa28.21■■■□□ 2.11
CLMN-202ENST00000553733 ALKQ9UM73 1620 aa28.18■■■□□ 2.1
CLMN-202ENST00000553733 XIRP1Q702N8 1843 aaKnown RBP28.18■■■□□ 2.1
CLMN-202ENST00000553733 RPRD2Q5VT52 1461 aaKnown RBP28.17■■■□□ 2.1
CLMN-202ENST00000553733 ROCK1Q13464 1354 aa28.17■■■□□ 2.1
CLMN-202ENST00000553733 PPARGC1BQ86YN6 1023 aaKnown RBP28.15■■■□□ 2.1
CLMN-202ENST00000553733 LTKP29376 864 aa28.11■■■□□ 2.09
CLMN-202ENST00000553733 TMEM2Q9UHN6 1383 aa28.11■■■□□ 2.09
CLMN-202ENST00000553733 LRRC7Q96NW7 1537 aa28.09■■■□□ 2.09
CLMN-202ENST00000553733 TMEM131LA2VDJ0 1609 aa28.09■■■□□ 2.09
CLMN-202ENST00000553733 UBAP1LF5GYI3 381 aa28.08■■■□□ 2.09
CLMN-202ENST00000553733 IDI1Q13907 227 aa28.07■■■□□ 2.08
CLMN-202ENST00000553733 RRBP1Q9P2E9 1410 aaKnown RBP28.06■■■□□ 2.08
CLMN-202ENST00000553733 SPHKAPQ2M3C7 1700 aa28.02■■■□□ 2.08
CLMN-202ENST00000553733 TXNDC2Q86VQ3 553 aa28.02■■■□□ 2.08
CLMN-202ENST00000553733 ITGAEP38570 1179 aa27.99■■■□□ 2.07
CLMN-202ENST00000553733 ZFYVE9O95405 1425 aa27.99■■■□□ 2.07
CLMN-202ENST00000553733 NWD1Q149M9 1564 aa27.99■■■□□ 2.07
CLMN-202ENST00000553733 STAG3Q9UJ98 1225 aa27.96■■■□□ 2.07
CLMN-202ENST00000553733 SLC52A1Q9NWF4 448 aa27.94■■■□□ 2.06
CLMN-202ENST00000553733 EID1Q9Y6B2 187 aa27.94■■■□□ 2.06
CLMN-202ENST00000553733 CHD2O14647 1828 aaKnown RBP27.93■■■□□ 2.06
CLMN-202ENST00000553733 NUP155O75694 1391 aa27.91■■■□□ 2.06
CLMN-202ENST00000553733 DISP3Q9P2K9 1392 aa27.88■■■□□ 2.05
CLMN-202ENST00000553733 RIMS2Q9UQ26 1411 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms