RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 DISP3Q9P2K9 1392 aa25.03■■□□□ 1.6
ACTN1-209ENST00000553659 FAM135AQ9P2D6 1515 aa25.01■■□□□ 1.59
ACTN1-209ENST00000553659 ARHGEF5Q12774 1597 aa25■■□□□ 1.59
ACTN1-209ENST00000553659 KDM5DQ9BY66 1539 aa24.99■■□□□ 1.59
ACTN1-209ENST00000553659 TSPY4P0CV99 314 aa24.98■■□□□ 1.59
ACTN1-209ENST00000553659 TSPY10P0CW01 314 aa24.98■■□□□ 1.59
ACTN1-209ENST00000553659 FBXO31Q5XUX0 539 aaPredicted RBP24.98■■□□□ 1.59
ACTN1-209ENST00000553659 PZPP20742 1482 aa24.97■■□□□ 1.59
ACTN1-209ENST00000553659 TNRQ92752 1358 aa24.97■■□□□ 1.59
ACTN1-209ENST00000553659 WASHC2CQ9Y4E1 1318 aa24.97■■□□□ 1.59
ACTN1-209ENST00000553659 POLR1AO95602 1720 aaPredicted RBP24.95■■□□□ 1.59
ACTN1-209ENST00000553659 ILDR2Q71H61 639 aa24.94■■□□□ 1.58
ACTN1-209ENST00000553659 LRRC9Q6ZRR7 1453 aa24.94■■□□□ 1.58
ACTN1-209ENST00000553659 VPS8Q8N3P4 1428 aa24.94■■□□□ 1.58
ACTN1-209ENST00000553659 UBAP1LF5GYI3 381 aa24.93■■□□□ 1.58
ACTN1-209ENST00000553659 SPATA31D1Q6ZQQ2 1576 aa24.91■■□□□ 1.58
ACTN1-209ENST00000553659 MIA2Q96PC5 1412 aa24.89■■□□□ 1.58
ACTN1-209ENST00000553659 NEURL4Q96JN8 1562 aa24.88■■□□□ 1.57
ACTN1-209ENST00000553659 MAST1Q9Y2H9 1570 aa24.88■■□□□ 1.57
ACTN1-209ENST00000553659 THEMISQ8N1K5 641 aaPredicted RBP24.87■■□□□ 1.57
ACTN1-209ENST00000553659 NLRP1Q9C000 1473 aa24.87■■□□□ 1.57
ACTN1-209ENST00000553659 MAP3K1Q13233 1512 aa24.86■■□□□ 1.57
ACTN1-209ENST00000553659 RNF17Q9BXT8 1623 aaKnown RBP24.86■■□□□ 1.57
ACTN1-209ENST00000553659 ANKLE2Q86XL3 938 aa24.86■■□□□ 1.57
ACTN1-209ENST00000553659 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.84■■□□□ 1.57
ACTN1-209ENST00000553659 KANK4Q5T7N3 995 aaPredicted RBP24.84■■□□□ 1.57
ACTN1-209ENST00000553659 UGGT1Q9NYU2 1555 aa24.84■■□□□ 1.57
ACTN1-209ENST00000553659 ZC3H13Q5T200 1668 aaKnown RBP24.83■■□□□ 1.57
ACTN1-209ENST00000553659 EIF2AK4Q9P2K8 1649 aaKnown RBP24.83■■□□□ 1.56
ACTN1-209ENST00000553659 CPS1P31327 1500 aa24.82■■□□□ 1.56
ACTN1-209ENST00000553659 SOCS7O14512 581 aa24.82■■□□□ 1.56
ACTN1-209ENST00000553659 SHANK2Q9UPX8 1470 aa24.82■■□□□ 1.56
ACTN1-209ENST00000553659 CFAP65Q6ZU64 1925 aaKnown RBP24.81■■□□□ 1.56
ACTN1-209ENST00000553659 ABCC3O15438 1527 aa24.81■■□□□ 1.56
ACTN1-209ENST00000553659 MYOM3Q5VTT5 1437 aa24.8■■□□□ 1.56
ACTN1-209ENST00000553659 DEPDC5O75140 1603 aa24.8■■□□□ 1.56
ACTN1-209ENST00000553659 MED14O60244 1454 aa24.78■■□□□ 1.56
ACTN1-209ENST00000553659 NPHP4O75161 1426 aaPredicted RBP24.76■■□□□ 1.55
ACTN1-209ENST00000553659 VWDEQ8N2E2 1590 aa24.76■■□□□ 1.55
ACTN1-209ENST00000553659 MROH1Q8NDA8 1641 aa24.75■■□□□ 1.55
ACTN1-209ENST00000553659 CEP152O94986 1710 aa24.75■■□□□ 1.55
ACTN1-209ENST00000553659 TOM1O60784 492 aa24.75■■□□□ 1.55
ACTN1-209ENST00000553659 DUOX2Q9NRD8 1548 aa24.74■■□□□ 1.55
ACTN1-209ENST00000553659 IQGAP1P46940 1657 aa24.74■■□□□ 1.55
ACTN1-209ENST00000553659 ERVK-7P63135 1459 aa24.73■■□□□ 1.55
ACTN1-209ENST00000553659 SCAF1Q9H7N4 1312 aaKnown RBP24.7■■□□□ 1.54
ACTN1-209ENST00000553659 PIP4K2BP78356 416 aa24.7■■□□□ 1.54
ACTN1-209ENST00000553659 UBR1Q8IWV7 1749 aa24.68■■□□□ 1.54
ACTN1-209ENST00000553659 CROCC2H7BZ55 1655 aa24.68■■□□□ 1.54
ACTN1-209ENST00000553659 HSPA1LP34931 641 aa24.67■■□□□ 1.54
ACTN1-209ENST00000553659 PTPN23Q9H3S7 1636 aa24.66■■□□□ 1.54
ACTN1-209ENST00000553659 STRCP1A6NGW2 1772 aa24.66■■□□□ 1.54
ACTN1-209ENST00000553659 ABCC5O15440 1437 aa24.66■■□□□ 1.54
ACTN1-209ENST00000553659 KIF15Q9NS87 1388 aa24.66■■□□□ 1.54
ACTN1-209ENST00000553659 APLP2Q06481 763 aa24.65■■□□□ 1.54
ACTN1-209ENST00000553659 RRP7BPQ9NSQ0 103 aa24.64■■□□□ 1.54
ACTN1-209ENST00000553659 ARHGAP31Q2M1Z3 1444 aa24.63■■□□□ 1.53
ACTN1-209ENST00000553659 ERBINQ96RT1 1412 aa24.63■■□□□ 1.53
ACTN1-209ENST00000553659 PRDM15P57071 1507 aaPredicted RBP24.63■■□□□ 1.53
ACTN1-209ENST00000553659 ALKQ9UM73 1620 aa24.61■■□□□ 1.53
ACTN1-209ENST00000553659 LRRC7Q96NW7 1537 aa24.59■■□□□ 1.53
ACTN1-209ENST00000553659 DAPK1P53355 1430 aa24.59■■□□□ 1.53
ACTN1-209ENST00000553659 SCAF11Q99590 1463 aaKnown RBP24.58■■□□□ 1.53
ACTN1-209ENST00000553659 ARHGAP23Q9P227 1491 aa24.58■■□□□ 1.52
ACTN1-209ENST00000553659 SLIT1O75093 1534 aa24.57■■□□□ 1.52
ACTN1-209ENST00000553659 TXNDC2Q86VQ3 553 aa24.57■■□□□ 1.52
ACTN1-209ENST00000553659 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.57■■□□□ 1.523e-8■□□□□ 9.4
ACTN1-209ENST00000553659 SYNMO15061 1565 aa24.57■■□□□ 1.52
ACTN1-209ENST00000553659 LTKP29376 864 aa24.56■■□□□ 1.52
ACTN1-209ENST00000553659 MED1Q15648 1581 aaPredicted RBP24.55■■□□□ 1.52
ACTN1-209ENST00000553659 FGD6Q6ZV73 1430 aa24.55■■□□□ 1.52
ACTN1-209ENST00000553659 KANK1Q14678 1352 aa24.54■■□□□ 1.52
ACTN1-209ENST00000553659 TRIM26Q12899 539 aaPredicted RBP24.54■■□□□ 1.52
ACTN1-209ENST00000553659 PIK3C2BO00750 1634 aa24.53■■□□□ 1.52
ACTN1-209ENST00000553659 ANKRD30AQ9BXX3 1397 aa24.53■■□□□ 1.52
ACTN1-209ENST00000553659 EID1Q9Y6B2 187 aa24.52■■□□□ 1.52
ACTN1-209ENST00000553659 CHIC2Q9UKJ5 165 aa24.51■■□□□ 1.51
ACTN1-209ENST00000553659 KDM5AP29375 1690 aaKnown RBP24.5■■□□□ 1.51
ACTN1-209ENST00000553659 LMTK2Q8IWU2 1503 aa24.49■■□□□ 1.51
ACTN1-209ENST00000553659 XIRP1Q702N8 1843 aaKnown RBP24.48■■□□□ 1.51
ACTN1-209ENST00000553659 TMEM2Q9UHN6 1383 aa24.48■■□□□ 1.51
ACTN1-209ENST00000553659 STAG3Q9UJ98 1225 aa24.48■■□□□ 1.51
ACTN1-209ENST00000553659 IDI1Q13907 227 aa24.46■■□□□ 1.51
ACTN1-209ENST00000553659 PCGF6Q9BYE7 350 aa24.44■■□□□ 1.5
ACTN1-209ENST00000553659 EFCAB6Q5THR3 1501 aa24.44■■□□□ 1.5
ACTN1-209ENST00000553659 ADGRL2O95490 1459 aa24.41■■□□□ 1.5
ACTN1-209ENST00000553659 SENP3Q9H4L4 574 aaPredicted RBP24.4■■□□□ 1.5
ACTN1-209ENST00000553659 NOS1P29475 1434 aa24.4■■□□□ 1.5
ACTN1-209ENST00000553659 PHF23Q9BUL5 403 aaPredicted RBP24.39■■□□□ 1.49
ACTN1-209ENST00000553659 TET3O43151 1660 aa24.37■■□□□ 1.49
ACTN1-209ENST00000553659 FAM50AQ14320 339 aaKnown RBP24.36■■□□□ 1.49
ACTN1-209ENST00000553659 SLC52A1Q9NWF4 448 aa24.36■■□□□ 1.49
ACTN1-209ENST00000553659 KCNA6P17658 529 aa24.35■■□□□ 1.49
ACTN1-209ENST00000553659 ADGRB3O60242 1522 aa24.35■■□□□ 1.49
ACTN1-209ENST00000553659 ANKRD50Q9ULJ7 1429 aa24.34■■□□□ 1.49
ACTN1-209ENST00000553659 SLC26A8Q96RN1 970 aa24.33■■□□□ 1.49
ACTN1-209ENST00000553659 RPRD2Q5VT52 1461 aaKnown RBP24.32■■□□□ 1.48
ACTN1-209ENST00000553659 TMEM94Q12767 1356 aa24.31■■□□□ 1.48
ACTN1-209ENST00000553659 MYO5BQ9ULV0 1848 aa24.31■■□□□ 1.48
ACTN1-209ENST00000553659 FAM135BQ49AJ0 1406 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms