RNA–Protein interactions for RNA: ENST00000553368.1

APEX1-204, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-204ENST00000553368 DNMT1P26358 1616 aaKnown RBP24.02■■□□□ 1.44
APEX1-204ENST00000553368 KDM5DQ9BY66 1539 aa24■■□□□ 1.43
APEX1-204ENST00000553368 PZPP20742 1482 aa24■■□□□ 1.43
APEX1-204ENST00000553368 FBXO31Q5XUX0 539 aaPredicted RBP23.99■■□□□ 1.43
APEX1-204ENST00000553368 VPS8Q8N3P4 1428 aa23.99■■□□□ 1.43
APEX1-204ENST00000553368 LRRC9Q6ZRR7 1453 aa23.99■■□□□ 1.43
APEX1-204ENST00000553368 TNRQ92752 1358 aa23.98■■□□□ 1.43
APEX1-204ENST00000553368 TSPY4P0CV99 314 aa23.97■■□□□ 1.43
APEX1-204ENST00000553368 TSPY10P0CW01 314 aa23.97■■□□□ 1.43
APEX1-204ENST00000553368 DISP3Q9P2K9 1392 aa23.96■■□□□ 1.43
APEX1-204ENST00000553368 WASHC2CQ9Y4E1 1318 aa23.96■■□□□ 1.43
APEX1-204ENST00000553368 LOC105371045A0A1W2PR82 267 aa23.93■■□□□ 1.42
APEX1-204ENST00000553368 MAST1Q9Y2H9 1570 aa23.92■■□□□ 1.42
APEX1-204ENST00000553368 MAP3K1Q13233 1512 aa23.92■■□□□ 1.42
APEX1-204ENST00000553368 ILDR2Q71H61 639 aa23.91■■□□□ 1.42
APEX1-204ENST00000553368 MIA2Q96PC5 1412 aa23.91■■□□□ 1.42
APEX1-204ENST00000553368 NEURL4Q96JN8 1562 aa23.9■■□□□ 1.42
APEX1-204ENST00000553368 KANK4Q5T7N3 995 aaPredicted RBP23.89■■□□□ 1.41
APEX1-204ENST00000553368 POLR1AO95602 1720 aaPredicted RBP23.89■■□□□ 1.41
APEX1-204ENST00000553368 NLRP1Q9C000 1473 aa23.88■■□□□ 1.41
APEX1-204ENST00000553368 UBAP1LF5GYI3 381 aa23.88■■□□□ 1.41
APEX1-204ENST00000553368 RNF17Q9BXT8 1623 aaKnown RBP23.88■■□□□ 1.41
APEX1-204ENST00000553368 THEMISQ8N1K5 641 aaPredicted RBP23.86■■□□□ 1.41
APEX1-204ENST00000553368 SPATA31D1Q6ZQQ2 1576 aa23.86■■□□□ 1.41
APEX1-204ENST00000553368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.85■■□□□ 1.41
APEX1-204ENST00000553368 MYOM3Q5VTT5 1437 aa23.84■■□□□ 1.41
APEX1-204ENST00000553368 ANKLE2Q86XL3 938 aa23.84■■□□□ 1.41
APEX1-204ENST00000553368 EIF2AK4Q9P2K8 1649 aaKnown RBP23.84■■□□□ 1.41
APEX1-204ENST00000553368 ABCC3O15438 1527 aa23.84■■□□□ 1.41
APEX1-204ENST00000553368 UGGT1Q9NYU2 1555 aa23.83■■□□□ 1.41
APEX1-204ENST00000553368 ZC3H13Q5T200 1668 aaKnown RBP23.83■■□□□ 1.4
APEX1-204ENST00000553368 CPS1P31327 1500 aa23.82■■□□□ 1.4
APEX1-204ENST00000553368 MED14O60244 1454 aa23.81■■□□□ 1.4
APEX1-204ENST00000553368 SHANK2Q9UPX8 1470 aa23.81■■□□□ 1.4
APEX1-204ENST00000553368 DEPDC5O75140 1603 aa23.81■■□□□ 1.4
APEX1-204ENST00000553368 MROH1Q8NDA8 1641 aa23.81■■□□□ 1.4
APEX1-204ENST00000553368 SOCS7O14512 581 aa23.78■■□□□ 1.4
APEX1-204ENST00000553368 VWDEQ8N2E2 1590 aa23.78■■□□□ 1.4
APEX1-204ENST00000553368 NPHP4O75161 1426 aaPredicted RBP23.77■■□□□ 1.4
APEX1-204ENST00000553368 ERVK-7P63135 1459 aa23.76■■□□□ 1.39
APEX1-204ENST00000553368 DUOX2Q9NRD8 1548 aa23.76■■□□□ 1.39
APEX1-204ENST00000553368 TOM1O60784 492 aa23.72■■□□□ 1.39
APEX1-204ENST00000553368 CEP152O94986 1710 aa23.72■■□□□ 1.39
APEX1-204ENST00000553368 ABCC5O15440 1437 aa23.71■■□□□ 1.39
APEX1-204ENST00000553368 IQGAP1P46940 1657 aa23.7■■□□□ 1.39
APEX1-204ENST00000553368 ARHGAP31Q2M1Z3 1444 aa23.69■■□□□ 1.38
APEX1-204ENST00000553368 KIF15Q9NS87 1388 aa23.69■■□□□ 1.38
APEX1-204ENST00000553368 ERBINQ96RT1 1412 aa23.68■■□□□ 1.38
APEX1-204ENST00000553368 CROCC2H7BZ55 1655 aa23.68■■□□□ 1.38
APEX1-204ENST00000553368 PRDM15P57071 1507 aaPredicted RBP23.68■■□□□ 1.38
APEX1-204ENST00000553368 PTPN23Q9H3S7 1636 aa23.67■■□□□ 1.38
APEX1-204ENST00000553368 UBR1Q8IWV7 1749 aa23.67■■□□□ 1.38
APEX1-204ENST00000553368 CFAP65Q6ZU64 1925 aaKnown RBP23.67■■□□□ 1.38
APEX1-204ENST00000553368 HSPA1LP34931 641 aa23.66■■□□□ 1.38
APEX1-204ENST00000553368 PIP4K2BP78356 416 aa23.66■■□□□ 1.38
APEX1-204ENST00000553368 RRP7BPQ9NSQ0 103 aa23.65■■□□□ 1.38
APEX1-204ENST00000553368 ALKQ9UM73 1620 aa23.64■■□□□ 1.38
APEX1-204ENST00000553368 DAPK1P53355 1430 aa23.64■■□□□ 1.37
APEX1-204ENST00000553368 STRCP1A6NGW2 1772 aa23.63■■□□□ 1.37
APEX1-204ENST00000553368 ARHGAP23Q9P227 1491 aa23.62■■□□□ 1.37
APEX1-204ENST00000553368 SCAF1Q9H7N4 1312 aaKnown RBP23.62■■□□□ 1.37
APEX1-204ENST00000553368 APLP2Q06481 763 aa23.62■■□□□ 1.37
APEX1-204ENST00000553368 FGD6Q6ZV73 1430 aa23.61■■□□□ 1.37
APEX1-204ENST00000553368 SLIT1O75093 1534 aa23.61■■□□□ 1.37
APEX1-204ENST00000553368 LRRC7Q96NW7 1537 aa23.61■■□□□ 1.37
APEX1-204ENST00000553368 SCAF11Q99590 1463 aaKnown RBP23.61■■□□□ 1.37
APEX1-204ENST00000553368 LTKP29376 864 aa23.59■■□□□ 1.37
APEX1-204ENST00000553368 SYNMO15061 1565 aa23.57■■□□□ 1.36
APEX1-204ENST00000553368 LMTK2Q8IWU2 1503 aa23.56■■□□□ 1.36
APEX1-204ENST00000553368 TXNDC2Q86VQ3 553 aa23.56■■□□□ 1.36
APEX1-204ENST00000553368 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.56■■□□□ 1.362e-8■□□□□ 10.4
APEX1-204ENST00000553368 KANK1Q14678 1352 aa23.55■■□□□ 1.36
APEX1-204ENST00000553368 ANKRD30AQ9BXX3 1397 aa23.55■■□□□ 1.36
APEX1-204ENST00000553368 MED1Q15648 1581 aaPredicted RBP23.54■■□□□ 1.36
APEX1-204ENST00000553368 PIK3C2BO00750 1634 aa23.53■■□□□ 1.36
APEX1-204ENST00000553368 CHIC2Q9UKJ5 165 aa23.52■■□□□ 1.36
APEX1-204ENST00000553368 EID1Q9Y6B2 187 aa23.51■■□□□ 1.35
APEX1-204ENST00000553368 TMEM2Q9UHN6 1383 aa23.51■■□□□ 1.35
APEX1-204ENST00000553368 KDM5AP29375 1690 aaKnown RBP23.5■■□□□ 1.35
APEX1-204ENST00000553368 IDI1Q13907 227 aa23.49■■□□□ 1.35
APEX1-204ENST00000553368 ADGRL2O95490 1459 aa23.49■■□□□ 1.35
APEX1-204ENST00000553368 NOS1P29475 1434 aa23.47■■□□□ 1.35
APEX1-204ENST00000553368 EFCAB6Q5THR3 1501 aa23.46■■□□□ 1.35
APEX1-204ENST00000553368 STAG3Q9UJ98 1225 aa23.45■■□□□ 1.34
APEX1-204ENST00000553368 XIRP1Q702N8 1843 aaKnown RBP23.45■■□□□ 1.34
APEX1-204ENST00000553368 TET3O43151 1660 aa23.41■■□□□ 1.34
APEX1-204ENST00000553368 SLC52A1Q9NWF4 448 aa23.4■■□□□ 1.34
APEX1-204ENST00000553368 ADGRB3O60242 1522 aa23.38■■□□□ 1.33
APEX1-204ENST00000553368 KCNA6P17658 529 aa23.38■■□□□ 1.33
APEX1-204ENST00000553368 ANKRD50Q9ULJ7 1429 aa23.38■■□□□ 1.33
APEX1-204ENST00000553368 RPRD2Q5VT52 1461 aaKnown RBP23.37■■□□□ 1.33
APEX1-204ENST00000553368 FAM50AQ14320 339 aaKnown RBP23.37■■□□□ 1.33
APEX1-204ENST00000553368 FAM135BQ49AJ0 1406 aa23.34■■□□□ 1.33
APEX1-204ENST00000553368 SLC26A8Q96RN1 970 aa23.34■■□□□ 1.33
APEX1-204ENST00000553368 SENP3Q9H4L4 574 aaPredicted RBP23.34■■□□□ 1.33
APEX1-204ENST00000553368 TMEM94Q12767 1356 aa23.34■■□□□ 1.33
APEX1-204ENST00000553368 PHF23Q9BUL5 403 aaPredicted RBP23.33■■□□□ 1.33
APEX1-204ENST00000553368 NWD1Q149M9 1564 aa23.31■■□□□ 1.32
APEX1-204ENST00000553368 ZFYVE9O95405 1425 aa23.3■■□□□ 1.32
APEX1-204ENST00000553368 PROSER2Q86WR7 435 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms