RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 CFDP1Q9UEE9 299 aaPredicted RBP13.93□□□□□ -0.18
CDK4-213ENST00000552713 ZNF644Q9H582 1327 aaPredicted RBP13.92□□□□□ -0.18
CDK4-213ENST00000552713 PLEKHH2Q8IVE3 1493 aa13.92□□□□□ -0.18
CDK4-213ENST00000552713 PIP4K2BP78356 416 aa13.91□□□□□ -0.18
CDK4-213ENST00000552713 CCNB3Q8WWL7 1395 aa13.91□□□□□ -0.18
CDK4-213ENST00000552713 SCAF1Q9H7N4 1312 aaKnown RBP13.9□□□□□ -0.18
CDK4-213ENST00000552713 ALKQ9UM73 1620 aa13.9□□□□□ -0.18
CDK4-213ENST00000552713 FBXO31Q5XUX0 539 aaPredicted RBP13.9□□□□□ -0.18
CDK4-213ENST00000552713 TIAM1Q13009 1591 aa13.9□□□□□ -0.18
CDK4-213ENST00000552713 MBD5Q9P267 1494 aa13.89□□□□□ -0.19
CDK4-213ENST00000552713 STRCP1A6NGW2 1772 aa13.88□□□□□ -0.19
CDK4-213ENST00000552713 SHANK2Q9UPX8 1470 aa13.88□□□□□ -0.19
CDK4-213ENST00000552713 VWDEQ8N2E2 1590 aa13.88□□□□□ -0.19
CDK4-213ENST00000552713 CPS1P31327 1500 aa13.87□□□□□ -0.19
CDK4-213ENST00000552713 CFAP65Q6ZU64 1925 aaKnown RBP13.86□□□□□ -0.19
CDK4-213ENST00000552713 TNRQ92752 1358 aa13.85□□□□□ -0.19
CDK4-213ENST00000552713 CACNB1Q02641 598 aaPredicted RBP13.85□□□□□ -0.19
CDK4-213ENST00000552713 MTUS2Q5JR59 1369 aa13.84□□□□□ -0.19
CDK4-213ENST00000552713 DHX29Q7Z478 1369 aaKnown RBP13.84□□□□□ -0.19
CDK4-213ENST00000552713 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.84□□□□□ -0.19
CDK4-213ENST00000552713 TOM1O60784 492 aa13.84□□□□□ -0.19
CDK4-213ENST00000552713 PZPP20742 1482 aa13.84□□□□□ -0.19
CDK4-213ENST00000552713 RTEL1-TNFRSF6BF6WH68 1400 aa13.83□□□□□ -0.2
CDK4-213ENST00000552713 KIF3BO15066 747 aa13.83□□□□□ -0.2
CDK4-213ENST00000552713 KDM5DQ9BY66 1539 aa13.83□□□□□ -0.2
CDK4-213ENST00000552713 DEPDC5O75140 1603 aa13.82□□□□□ -0.2
CDK4-213ENST00000552713 IQGAP1P46940 1657 aa13.82□□□□□ -0.2
CDK4-213ENST00000552713 EHBP1L1Q8N3D4 1523 aa13.8□□□□□ -0.2
CDK4-213ENST00000552713 UGGT1Q9NYU2 1555 aa13.8□□□□□ -0.2
CDK4-213ENST00000552713 NPHP4O75161 1426 aaPredicted RBP13.8□□□□□ -0.2
CDK4-213ENST00000552713 MED14O60244 1454 aa13.8□□□□□ -0.2
CDK4-213ENST00000552713 ANKLE2Q86XL3 938 aa13.79□□□□□ -0.2
CDK4-213ENST00000552713 MIA2Q96PC5 1412 aa13.79□□□□□ -0.2
CDK4-213ENST00000552713 XIRP1Q702N8 1843 aaKnown RBP13.78□□□□□ -0.2
CDK4-213ENST00000552713 WASHC2CQ9Y4E1 1318 aa13.78□□□□□ -0.2
CDK4-213ENST00000552713 CAMSAP2Q08AD1 1489 aa13.78□□□□□ -0.2
CDK4-213ENST00000552713 CCDC141Q6ZP82 1450 aa13.78□□□□□ -0.2
CDK4-213ENST00000552713 ZC3H13Q5T200 1668 aaKnown RBP13.77□□□□□ -0.21
CDK4-213ENST00000552713 CEP162Q5TB80 1403 aa13.77□□□□□ -0.21
CDK4-213ENST00000552713 THEMISQ8N1K5 641 aaPredicted RBP13.77□□□□□ -0.21
CDK4-213ENST00000552713 NLRP1Q9C000 1473 aa13.77□□□□□ -0.21
CDK4-213ENST00000552713 FAM135AQ9P2D6 1515 aa13.77□□□□□ -0.21
CDK4-213ENST00000552713 LRRC7Q96NW7 1537 aa13.76□□□□□ -0.21
CDK4-213ENST00000552713 CEP152O94986 1710 aa13.75□□□□□ -0.21
CDK4-213ENST00000552713 RNF17Q9BXT8 1623 aaKnown RBP13.75□□□□□ -0.21
CDK4-213ENST00000552713 UBR1Q8IWV7 1749 aa13.74□□□□□ -0.21
CDK4-213ENST00000552713 NCOA2Q15596 1464 aa13.74□□□□□ -0.21
CDK4-213ENST00000552713 SYNMO15061 1565 aa13.73□□□□□ -0.21
CDK4-213ENST00000552713 ABCC3O15438 1527 aa13.73□□□□□ -0.21
CDK4-213ENST00000552713 ARHGEF5Q12774 1597 aa13.72□□□□□ -0.21
CDK4-213ENST00000552713 RGS17Q9UGC6 210 aaPredicted RBP13.72□□□□□ -0.21
CDK4-213ENST00000552713 MROH1Q8NDA8 1641 aa13.72□□□□□ -0.21
CDK4-213ENST00000552713 ERVK-7P63135 1459 aa13.7□□□□□ -0.22
CDK4-213ENST00000552713 RSPH4AQ5TD94 716 aa13.68□□□□□ -0.22
CDK4-213ENST00000552713 EIF2AK4Q9P2K8 1649 aaKnown RBP13.67□□□□□ -0.22
CDK4-213ENST00000552713 MAST1Q9Y2H9 1570 aa13.66□□□□□ -0.22
CDK4-213ENST00000552713 LTKP29376 864 aa13.66□□□□□ -0.22
CDK4-213ENST00000552713 SCAF11Q99590 1463 aaKnown RBP13.66□□□□□ -0.22
CDK4-213ENST00000552713 TSPY4P0CV99 314 aa13.65□□□□□ -0.22
CDK4-213ENST00000552713 TSPY10P0CW01 314 aa13.65□□□□□ -0.22
CDK4-213ENST00000552713 ARHGAP23Q9P227 1491 aa13.64□□□□□ -0.23
CDK4-213ENST00000552713 PIK3C2BO00750 1634 aa13.63□□□□□ -0.23
CDK4-213ENST00000552713 SLIT1O75093 1534 aa13.63□□□□□ -0.23
CDK4-213ENST00000552713 POTEAQ6S8J7 498 aa13.61□□□□□ -0.23
CDK4-213ENST00000552713 TXNDC2Q86VQ3 553 aa13.61□□□□□ -0.23
CDK4-213ENST00000552713 SETD1AO15047 1707 aaKnown RBP13.61□□□□□ -0.23
CDK4-213ENST00000552713 ROBO1Q9Y6N7 1651 aa13.6□□□□□ -0.23
CDK4-213ENST00000552713 LRRC9Q6ZRR7 1453 aa13.59□□□□□ -0.23
CDK4-213ENST00000552713 FAM135BQ49AJ0 1406 aa13.58□□□□□ -0.24
CDK4-213ENST00000552713 PRDM15P57071 1507 aaPredicted RBP13.58□□□□□ -0.24
CDK4-213ENST00000552713 DUOX2Q9NRD8 1548 aa13.58□□□□□ -0.24
CDK4-213ENST00000552713 CROCC2H7BZ55 1655 aa13.57□□□□□ -0.24
CDK4-213ENST00000552713 RBM33Q96EV2 1170 aaKnown RBP13.57□□□□□ -0.24
CDK4-213ENST00000552713 MAP3K1Q13233 1512 aa13.57□□□□□ -0.24
CDK4-213ENST00000552713 KANK4Q5T7N3 995 aaPredicted RBP13.56□□□□□ -0.24
CDK4-213ENST00000552713 TMEM94Q12767 1356 aa13.56□□□□□ -0.24
CDK4-213ENST00000552713 ARHGAP31Q2M1Z3 1444 aa13.56□□□□□ -0.24
CDK4-213ENST00000552713 TET3O43151 1660 aa13.55□□□□□ -0.24
CDK4-213ENST00000552713 TMEM2Q9UHN6 1383 aa13.55□□□□□ -0.24
CDK4-213ENST00000552713 MYO5BQ9ULV0 1848 aa13.55□□□□□ -0.24
CDK4-213ENST00000552713 KDM5AP29375 1690 aaKnown RBP13.54□□□□□ -0.24
CDK4-213ENST00000552713 EID1Q9Y6B2 187 aa13.54□□□□□ -0.24
CDK4-213ENST00000552713 PHLPP1O60346 1717 aa13.53□□□□□ -0.24
CDK4-213ENST00000552713 MYOM3Q5VTT5 1437 aa13.53□□□□□ -0.24
CDK4-213ENST00000552713 SLC26A8Q96RN1 970 aa13.52□□□□□ -0.25
CDK4-213ENST00000552713 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.52□□□□□ -0.25
CDK4-213ENST00000552713 KIF15Q9NS87 1388 aa13.52□□□□□ -0.25
CDK4-213ENST00000552713 EFCAB6Q5THR3 1501 aa13.52□□□□□ -0.25
CDK4-213ENST00000552713 NWD1Q149M9 1564 aa13.51□□□□□ -0.25
CDK4-213ENST00000552713 KCNA6P17658 529 aa13.51□□□□□ -0.25
CDK4-213ENST00000552713 IDI1Q13907 227 aa13.51□□□□□ -0.25
CDK4-213ENST00000552713 RRP7BPQ9NSQ0 103 aa13.51□□□□□ -0.25
CDK4-213ENST00000552713 ABCC5O15440 1437 aa13.5□□□□□ -0.25
CDK4-213ENST00000552713 VPS8Q8N3P4 1428 aa13.5□□□□□ -0.25
CDK4-213ENST00000552713 ERBINQ96RT1 1412 aa13.5□□□□□ -0.25
CDK4-213ENST00000552713 PROSER2Q86WR7 435 aaPredicted RBP13.5□□□□□ -0.25
CDK4-213ENST00000552713 CHD2O14647 1828 aaKnown RBP13.5□□□□□ -0.25
CDK4-213ENST00000552713 STAG3Q9UJ98 1225 aa13.49□□□□□ -0.25
CDK4-213ENST00000552713 PTPN23Q9H3S7 1636 aa13.49□□□□□ -0.25
CDK4-213ENST00000552713 ADGRB3O60242 1522 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms