RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 MAST1Q9Y2H9 1570 aa15.2■□□□□ 0.02
GCN1-208ENST00000551549 ABCC5O15440 1437 aa15.2■□□□□ 0.02
GCN1-208ENST00000551549 CAMSAP1Q5T5Y3 1602 aa15.2■□□□□ 0.02
GCN1-208ENST00000551549 KDM5DQ9BY66 1539 aa15.19■□□□□ 0.02
GCN1-208ENST00000551549 FGD6Q6ZV73 1430 aa15.18■□□□□ 0.02
GCN1-208ENST00000551549 RRP7BPQ9NSQ0 103 aa15.18■□□□□ 0.02
GCN1-208ENST00000551549 TNRQ92752 1358 aa15.18■□□□□ 0.02
GCN1-208ENST00000551549 PZPP20742 1482 aa15.17■□□□□ 0.02
GCN1-208ENST00000551549 MYO3AQ8NEV4 1616 aa15.17■□□□□ 0.02
GCN1-208ENST00000551549 CEP170BQ9Y4F5 1589 aaPredicted RBP15.16■□□□□ 0.02
GCN1-208ENST00000551549 KIF15Q9NS87 1388 aa15.16■□□□□ 0.02
GCN1-208ENST00000551549 PTPN23Q9H3S7 1636 aa15.16■□□□□ 0.02
GCN1-208ENST00000551549 PKD2Q13563 968 aa15.15■□□□□ 0.02
GCN1-208ENST00000551549 CHIC2Q9UKJ5 165 aa15.15■□□□□ 0.02
GCN1-208ENST00000551549 FAM135AQ9P2D6 1515 aa15.15■□□□□ 0.02
GCN1-208ENST00000551549 DAPK1P53355 1430 aa15.15■□□□□ 0.02
GCN1-208ENST00000551549 A2ML1A8K2U0 1454 aa15.14■□□□□ 0.01
GCN1-208ENST00000551549 TCOF1Q13428 1488 aaKnown RBP15.14■□□□□ 0.01
GCN1-208ENST00000551549 SHANK2Q9UPX8 1470 aa15.14■□□□□ 0.01
GCN1-208ENST00000551549 ABCC3O15438 1527 aa15.13■□□□□ 0.01
GCN1-208ENST00000551549 DUOX2Q9NRD8 1548 aa15.13■□□□□ 0.01
GCN1-208ENST00000551549 RNF17Q9BXT8 1623 aaKnown RBP15.13■□□□□ 0.01
GCN1-208ENST00000551549 PLA2R1Q13018 1463 aa15.13■□□□□ 0.01
GCN1-208ENST00000551549 ZNF142P52746 1687 aaPredicted RBP15.12■□□□□ 0.01
GCN1-208ENST00000551549 FAM50AQ14320 339 aaKnown RBP15.12■□□□□ 0.01
GCN1-208ENST00000551549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.11■□□□□ 0.013e-7■□□□□ 10.7
GCN1-208ENST00000551549 DNMT1P26358 1616 aaKnown RBP15.1■□□□□ 0.01
GCN1-208ENST00000551549 MROH1Q8NDA8 1641 aa15.1■□□□□ 0.01
GCN1-208ENST00000551549 ZNF335Q9H4Z2 1342 aaPredicted RBP15.1■□□□□ 0.01
GCN1-208ENST00000551549 LTBP4Q8N2S1 1624 aa15.1■□□□□ 0.01
GCN1-208ENST00000551549 EIF2AK4Q9P2K8 1649 aaKnown RBP15.1■□□□□ 0.01
GCN1-208ENST00000551549 ERBINQ96RT1 1412 aa15.09■□□□□ 0.01
GCN1-208ENST00000551549 ANKRD30AQ9BXX3 1397 aa15.09■□□□□ 0.01
GCN1-208ENST00000551549 THEMISQ8N1K5 641 aaPredicted RBP15.08■□□□□ 0
GCN1-208ENST00000551549 CROCC2H7BZ55 1655 aa15.08■□□□□ 0
GCN1-208ENST00000551549 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.08■□□□□ 0
GCN1-208ENST00000551549 NLRP1Q9C000 1473 aa15.08■□□□□ 0
GCN1-208ENST00000551549 ERVK-7P63135 1459 aa15.07■□□□□ 0
GCN1-208ENST00000551549 ANKLE2Q86XL3 938 aa15.06■□□□□ 0
GCN1-208ENST00000551549 PPARGC1BQ86YN6 1023 aaKnown RBP15.06■□□□□ 0
GCN1-208ENST00000551549 ZC3H13Q5T200 1668 aaKnown RBP15.04■□□□□ -0
GCN1-208ENST00000551549 SPATA31D1Q6ZQQ2 1576 aa15.04■□□□□ -0
GCN1-208ENST00000551549 UGGT1Q9NYU2 1555 aa15.04■□□□□ -0
GCN1-208ENST00000551549 PRDM15P57071 1507 aaPredicted RBP15.03■□□□□ -0
GCN1-208ENST00000551549 ARHGAP31Q2M1Z3 1444 aa15.02■□□□□ -0
GCN1-208ENST00000551549 KANK1Q14678 1352 aa15.02■□□□□ -0
GCN1-208ENST00000551549 CEP152O94986 1710 aa15.02□□□□□ -0.01
GCN1-208ENST00000551549 NEURL4Q96JN8 1562 aa15.02□□□□□ -0.01
GCN1-208ENST00000551549 ADGRL2O95490 1459 aa15.01□□□□□ -0.01
GCN1-208ENST00000551549 IQSEC2Q5JU85 1478 aa14.99□□□□□ -0.01
GCN1-208ENST00000551549 CFAP65Q6ZU64 1925 aaKnown RBP14.99□□□□□ -0.01
GCN1-208ENST00000551549 NPHP4O75161 1426 aaPredicted RBP14.99□□□□□ -0.01
GCN1-208ENST00000551549 DEPDC5O75140 1603 aa14.99□□□□□ -0.01
GCN1-208ENST00000551549 ANKRD50Q9ULJ7 1429 aa14.98□□□□□ -0.01
GCN1-208ENST00000551549 LMTK2Q8IWU2 1503 aa14.97□□□□□ -0.01
GCN1-208ENST00000551549 MED14O60244 1454 aa14.96□□□□□ -0.01
GCN1-208ENST00000551549 UBAP1LF5GYI3 381 aa14.96□□□□□ -0.01
GCN1-208ENST00000551549 POLR1AO95602 1720 aaPredicted RBP14.96□□□□□ -0.01
GCN1-208ENST00000551549 LTKP29376 864 aa14.96□□□□□ -0.01
GCN1-208ENST00000551549 ITGAEP38570 1179 aa14.96□□□□□ -0.01
GCN1-208ENST00000551549 VWDEQ8N2E2 1590 aa14.96□□□□□ -0.01
GCN1-208ENST00000551549 IDI1Q13907 227 aa14.95□□□□□ -0.02
GCN1-208ENST00000551549 TXNDC2Q86VQ3 553 aa14.94□□□□□ -0.02
GCN1-208ENST00000551549 STAG3Q9UJ98 1225 aa14.93□□□□□ -0.02
GCN1-208ENST00000551549 UBR1Q8IWV7 1749 aa14.92□□□□□ -0.02
GCN1-208ENST00000551549 ROCK1Q13464 1354 aa14.92□□□□□ -0.02
GCN1-208ENST00000551549 SCAF11Q99590 1463 aaKnown RBP14.91□□□□□ -0.02
GCN1-208ENST00000551549 ARHGAP23Q9P227 1491 aa14.91□□□□□ -0.02
GCN1-208ENST00000551549 EID1Q9Y6B2 187 aa14.91□□□□□ -0.02
GCN1-208ENST00000551549 EFCAB6Q5THR3 1501 aa14.91□□□□□ -0.02
GCN1-208ENST00000551549 NOS1P29475 1434 aa14.91□□□□□ -0.02
GCN1-208ENST00000551549 TMEM2Q9UHN6 1383 aa14.9□□□□□ -0.02
GCN1-208ENST00000551549 SLIT1O75093 1534 aa14.9□□□□□ -0.02
GCN1-208ENST00000551549 CPS1P31327 1500 aa14.9□□□□□ -0.02
GCN1-208ENST00000551549 IQGAP1P46940 1657 aa14.89□□□□□ -0.03
GCN1-208ENST00000551549 SYNMO15061 1565 aa14.89□□□□□ -0.03
GCN1-208ENST00000551549 PIK3C2BO00750 1634 aa14.88□□□□□ -0.03
GCN1-208ENST00000551549 SLC52A1Q9NWF4 448 aa14.88□□□□□ -0.03
GCN1-208ENST00000551549 PIP4K2BP78356 416 aa14.87□□□□□ -0.03
GCN1-208ENST00000551549 TOM1O60784 492 aa14.86□□□□□ -0.03
GCN1-208ENST00000551549 SCAF1Q9H7N4 1312 aaKnown RBP14.86□□□□□ -0.03
GCN1-208ENST00000551549 RPRD2Q5VT52 1461 aaKnown RBP14.85□□□□□ -0.03
GCN1-208ENST00000551549 NUP155O75694 1391 aa14.85□□□□□ -0.03
GCN1-208ENST00000551549 LRRC7Q96NW7 1537 aa14.83□□□□□ -0.04
GCN1-208ENST00000551549 UNC13BO14795 1591 aa14.83□□□□□ -0.04
GCN1-208ENST00000551549 SLC26A8Q96RN1 970 aa14.83□□□□□ -0.04
GCN1-208ENST00000551549 ADGRB3O60242 1522 aa14.82□□□□□ -0.04
GCN1-208ENST00000551549 TET3O43151 1660 aa14.82□□□□□ -0.04
GCN1-208ENST00000551549 SENP3Q9H4L4 574 aaPredicted RBP14.82□□□□□ -0.04
GCN1-208ENST00000551549 STRCP1A6NGW2 1772 aa14.82□□□□□ -0.04
GCN1-208ENST00000551549 DISP3Q9P2K9 1392 aa14.82□□□□□ -0.04
GCN1-208ENST00000551549 RRBP1Q9P2E9 1410 aaKnown RBP14.82□□□□□ -0.04
GCN1-208ENST00000551549 CHGAP10645 457 aaKnown RBP14.81□□□□□ -0.04
GCN1-208ENST00000551549 HSPA1LP34931 641 aa14.81□□□□□ -0.04
GCN1-208ENST00000551549 BCANQ96GW7 911 aa14.8□□□□□ -0.04
GCN1-208ENST00000551549 KDM5AP29375 1690 aaKnown RBP14.8□□□□□ -0.04
GCN1-208ENST00000551549 ALKQ9UM73 1620 aa14.78□□□□□ -0.04
GCN1-208ENST00000551549 ZFYVE9O95405 1425 aa14.78□□□□□ -0.04
GCN1-208ENST00000551549 KCNA6P17658 529 aa14.78□□□□□ -0.04
GCN1-208ENST00000551549 IQGAP3Q86VI3 1631 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms