RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 DISP3Q9P2K9 1392 aa21.62■■□□□ 1.05
TROAP-211ENST00000549891 ARHGEF5Q12774 1597 aa21.62■■□□□ 1.05
TROAP-211ENST00000549891 ZNF335Q9H4Z2 1342 aaPredicted RBP21.6■■□□□ 1.05
TROAP-211ENST00000549891 TSPY4P0CV99 314 aa21.6■■□□□ 1.05
TROAP-211ENST00000549891 TSPY10P0CW01 314 aa21.6■■□□□ 1.05
TROAP-211ENST00000549891 POLR1AO95602 1720 aaPredicted RBP21.6■■□□□ 1.05
TROAP-211ENST00000549891 PZPP20742 1482 aa21.58■■□□□ 1.05
TROAP-211ENST00000549891 WASHC2CQ9Y4E1 1318 aa21.58■■□□□ 1.05
TROAP-211ENST00000549891 TNRQ92752 1358 aa21.58■■□□□ 1.04
TROAP-211ENST00000549891 VPS8Q8N3P4 1428 aa21.56■■□□□ 1.04
TROAP-211ENST00000549891 LRRC9Q6ZRR7 1453 aa21.56■■□□□ 1.04
TROAP-211ENST00000549891 SPATA31D1Q6ZQQ2 1576 aa21.55■■□□□ 1.04
TROAP-211ENST00000549891 FBXO31Q5XUX0 539 aaPredicted RBP21.54■■□□□ 1.04
TROAP-211ENST00000549891 UBAP1LF5GYI3 381 aa21.53■■□□□ 1.04
TROAP-211ENST00000549891 MAST1Q9Y2H9 1570 aa21.53■■□□□ 1.04
TROAP-211ENST00000549891 NLRP1Q9C000 1473 aa21.52■■□□□ 1.03
TROAP-211ENST00000549891 ZC3H13Q5T200 1668 aaKnown RBP21.51■■□□□ 1.03
TROAP-211ENST00000549891 RNF17Q9BXT8 1623 aaKnown RBP21.51■■□□□ 1.03
TROAP-211ENST00000549891 MAP3K1Q13233 1512 aa21.5■■□□□ 1.03
TROAP-211ENST00000549891 MIA2Q96PC5 1412 aa21.5■■□□□ 1.03
TROAP-211ENST00000549891 EIF2AK4Q9P2K8 1649 aaKnown RBP21.49■■□□□ 1.03
TROAP-211ENST00000549891 THEMISQ8N1K5 641 aaPredicted RBP21.49■■□□□ 1.03
TROAP-211ENST00000549891 NEURL4Q96JN8 1562 aa21.48■■□□□ 1.03
TROAP-211ENST00000549891 ANKLE2Q86XL3 938 aa21.48■■□□□ 1.03
TROAP-211ENST00000549891 CPS1P31327 1500 aa21.48■■□□□ 1.03
TROAP-211ENST00000549891 UGGT1Q9NYU2 1555 aa21.48■■□□□ 1.03
TROAP-211ENST00000549891 ILDR2Q71H61 639 aa21.47■■□□□ 1.03
TROAP-211ENST00000549891 DEPDC5O75140 1603 aa21.45■■□□□ 1.02
TROAP-211ENST00000549891 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.45■■□□□ 1.02
TROAP-211ENST00000549891 MYOM3Q5VTT5 1437 aa21.45■■□□□ 1.02
TROAP-211ENST00000549891 SHANK2Q9UPX8 1470 aa21.44■■□□□ 1.02
TROAP-211ENST00000549891 ABCC3O15438 1527 aa21.44■■□□□ 1.02
TROAP-211ENST00000549891 LOC105371045A0A1W2PR82 267 aa21.43■■□□□ 1.02
TROAP-211ENST00000549891 SOCS7O14512 581 aa21.43■■□□□ 1.02
TROAP-211ENST00000549891 MED14O60244 1454 aa21.41■■□□□ 1.02
TROAP-211ENST00000549891 KANK4Q5T7N3 995 aaPredicted RBP21.41■■□□□ 1.02
TROAP-211ENST00000549891 DUOX2Q9NRD8 1548 aa21.4■■□□□ 1.02
TROAP-211ENST00000549891 CFAP65Q6ZU64 1925 aaKnown RBP21.4■■□□□ 1.02
TROAP-211ENST00000549891 CEP152O94986 1710 aa21.4■■□□□ 1.02
TROAP-211ENST00000549891 IQGAP1P46940 1657 aa21.4■■□□□ 1.02
TROAP-211ENST00000549891 NPHP4O75161 1426 aaPredicted RBP21.39■■□□□ 1.02
TROAP-211ENST00000549891 TOM1O60784 492 aa21.39■■□□□ 1.01
TROAP-211ENST00000549891 VWDEQ8N2E2 1590 aa21.38■■□□□ 1.01
TROAP-211ENST00000549891 MROH1Q8NDA8 1641 aa21.37■■□□□ 1.01
TROAP-211ENST00000549891 ERVK-7P63135 1459 aa21.37■■□□□ 1.01
TROAP-211ENST00000549891 SCAF1Q9H7N4 1312 aaKnown RBP21.36■■□□□ 1.01
TROAP-211ENST00000549891 CROCC2H7BZ55 1655 aa21.36■■□□□ 1.01
TROAP-211ENST00000549891 APLP2Q06481 763 aa21.34■■□□□ 1.01
TROAP-211ENST00000549891 UBR1Q8IWV7 1749 aa21.33■■□□□ 1.01
TROAP-211ENST00000549891 PIP4K2BP78356 416 aa21.33■■□□□ 1.01
TROAP-211ENST00000549891 ERBINQ96RT1 1412 aa21.32■■□□□ 1
TROAP-211ENST00000549891 PRDM15P57071 1507 aaPredicted RBP21.32■■□□□ 1
TROAP-211ENST00000549891 PTPN23Q9H3S7 1636 aa21.32■■□□□ 1
TROAP-211ENST00000549891 KIF15Q9NS87 1388 aa21.32■■□□□ 1
TROAP-211ENST00000549891 ARHGAP31Q2M1Z3 1444 aa21.29■■□□□ 1
TROAP-211ENST00000549891 SYNMO15061 1565 aa21.29■■□□□ 1
TROAP-211ENST00000549891 HSPA1LP34931 641 aa21.28■■□□□ 1
TROAP-211ENST00000549891 ABCC5O15440 1437 aa21.28■■□□□ 1
TROAP-211ENST00000549891 STRCP1A6NGW2 1772 aa21.27■■□□□ 1
TROAP-211ENST00000549891 RRP7BPQ9NSQ0 103 aa21.26■□□□□ 0.99
TROAP-211ENST00000549891 SCAF11Q99590 1463 aaKnown RBP21.26■□□□□ 0.99
TROAP-211ENST00000549891 KANK1Q14678 1352 aa21.25■□□□□ 0.99
TROAP-211ENST00000549891 DAPK1P53355 1430 aa21.25■□□□□ 0.99
TROAP-211ENST00000549891 SLIT1O75093 1534 aa21.24■□□□□ 0.99
TROAP-211ENST00000549891 FGD6Q6ZV73 1430 aa21.23■□□□□ 0.99
TROAP-211ENST00000549891 LRRC7Q96NW7 1537 aa21.23■□□□□ 0.99
TROAP-211ENST00000549891 ARHGAP23Q9P227 1491 aa21.22■□□□□ 0.99
TROAP-211ENST00000549891 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.22■□□□□ 0.993e-6■■■■□ 20.1
TROAP-211ENST00000549891 MED1Q15648 1581 aaPredicted RBP21.22■□□□□ 0.99
TROAP-211ENST00000549891 EID1Q9Y6B2 187 aa21.21■□□□□ 0.99
TROAP-211ENST00000549891 KDM5AP29375 1690 aaKnown RBP21.21■□□□□ 0.99
TROAP-211ENST00000549891 ANKRD30AQ9BXX3 1397 aa21.21■□□□□ 0.99
TROAP-211ENST00000549891 PIK3C2BO00750 1634 aa21.2■□□□□ 0.98
TROAP-211ENST00000549891 ALKQ9UM73 1620 aa21.2■□□□□ 0.98
TROAP-211ENST00000549891 TXNDC2Q86VQ3 553 aa21.2■□□□□ 0.98
TROAP-211ENST00000549891 STAG3Q9UJ98 1225 aa21.18■□□□□ 0.98
TROAP-211ENST00000549891 LTKP29376 864 aa21.17■□□□□ 0.98
TROAP-211ENST00000549891 LMTK2Q8IWU2 1503 aa21.17■□□□□ 0.98
TROAP-211ENST00000549891 CHIC2Q9UKJ5 165 aa21.15■□□□□ 0.98
TROAP-211ENST00000549891 TMEM2Q9UHN6 1383 aa21.14■□□□□ 0.98
TROAP-211ENST00000549891 EFCAB6Q5THR3 1501 aa21.14■□□□□ 0.97
TROAP-211ENST00000549891 XIRP1Q702N8 1843 aaKnown RBP21.12■□□□□ 0.97
TROAP-211ENST00000549891 ADGRL2O95490 1459 aa21.1■□□□□ 0.97
TROAP-211ENST00000549891 PHF23Q9BUL5 403 aaPredicted RBP21.1■□□□□ 0.97
TROAP-211ENST00000549891 IDI1Q13907 227 aa21.09■□□□□ 0.97
TROAP-211ENST00000549891 NOS1P29475 1434 aa21.06■□□□□ 0.96
TROAP-211ENST00000549891 ADGRB3O60242 1522 aa21.06■□□□□ 0.96
TROAP-211ENST00000549891 SLC52A1Q9NWF4 448 aa21.06■□□□□ 0.96
TROAP-211ENST00000549891 FAM50AQ14320 339 aaKnown RBP21.05■□□□□ 0.96
TROAP-211ENST00000549891 SENP3Q9H4L4 574 aaPredicted RBP21.05■□□□□ 0.96
TROAP-211ENST00000549891 RPRD2Q5VT52 1461 aaKnown RBP21.05■□□□□ 0.96
TROAP-211ENST00000549891 ANKRD50Q9ULJ7 1429 aa21.04■□□□□ 0.96
TROAP-211ENST00000549891 TET3O43151 1660 aa21.03■□□□□ 0.96
TROAP-211ENST00000549891 KCNA6P17658 529 aa21.02■□□□□ 0.96
TROAP-211ENST00000549891 MYO5BQ9ULV0 1848 aa20.99■□□□□ 0.95
TROAP-211ENST00000549891 GCC2Q8IWJ2 1684 aa20.99■□□□□ 0.95
TROAP-211ENST00000549891 TMEM94Q12767 1356 aa20.99■□□□□ 0.95
TROAP-211ENST00000549891 FAM135BQ49AJ0 1406 aa20.99■□□□□ 0.95
TROAP-211ENST00000549891 SLC26A8Q96RN1 970 aa20.99■□□□□ 0.95
TROAP-211ENST00000549891 BCANQ96GW7 911 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms