RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 ZNF142P52746 1687 aaPredicted RBP22.61■■□□□ 1.21
COL2A1-209ENST00000546974 CAMSAP1Q5T5Y3 1602 aa22.6■■□□□ 1.21
COL2A1-209ENST00000546974 KDM5DQ9BY66 1539 aa22.58■■□□□ 1.21
COL2A1-209ENST00000546974 CEP170BQ9Y4F5 1589 aaPredicted RBP22.58■■□□□ 1.2
COL2A1-209ENST00000546974 WASHC2CQ9Y4E1 1318 aa22.57■■□□□ 1.2
COL2A1-209ENST00000546974 PZPP20742 1482 aa22.54■■□□□ 1.2
COL2A1-209ENST00000546974 PLA2R1Q13018 1463 aa22.54■■□□□ 1.2
COL2A1-209ENST00000546974 PKD2Q13563 968 aa22.52■■□□□ 1.2
COL2A1-209ENST00000546974 RNF17Q9BXT8 1623 aaKnown RBP22.52■■□□□ 1.2
COL2A1-209ENST00000546974 A2ML1A8K2U0 1454 aa22.52■■□□□ 1.2
COL2A1-209ENST00000546974 PTPN23Q9H3S7 1636 aa22.51■■□□□ 1.19
COL2A1-209ENST00000546974 EIF2AK4Q9P2K8 1649 aaKnown RBP22.51■■□□□ 1.19
COL2A1-209ENST00000546974 FBXO31Q5XUX0 539 aaPredicted RBP22.51■■□□□ 1.19
COL2A1-209ENST00000546974 NCKAP5LQ9HCH0 1330 aa22.51■■□□□ 1.19
COL2A1-209ENST00000546974 TNRQ92752 1358 aa22.5■■□□□ 1.19
COL2A1-209ENST00000546974 DNMT1P26358 1616 aaKnown RBP22.49■■□□□ 1.19
COL2A1-209ENST00000546974 TCOF1Q13428 1488 aaKnown RBP22.49■■□□□ 1.19
COL2A1-209ENST00000546974 LTBP4Q8N2S1 1624 aa22.48■■□□□ 1.19
COL2A1-209ENST00000546974 SHANK2Q9UPX8 1470 aa22.47■■□□□ 1.19
COL2A1-209ENST00000546974 DUOX2Q9NRD8 1548 aa22.47■■□□□ 1.19
COL2A1-209ENST00000546974 CROCC2H7BZ55 1655 aa22.47■■□□□ 1.19
COL2A1-209ENST00000546974 ABCC5O15440 1437 aa22.47■■□□□ 1.19
COL2A1-209ENST00000546974 ZC3H13Q5T200 1668 aaKnown RBP22.46■■□□□ 1.19
COL2A1-209ENST00000546974 FGD6Q6ZV73 1430 aa22.46■■□□□ 1.19
COL2A1-209ENST00000546974 ABCC3O15438 1527 aa22.45■■□□□ 1.18
COL2A1-209ENST00000546974 MROH1Q8NDA8 1641 aa22.43■■□□□ 1.18
COL2A1-209ENST00000546974 KIF15Q9NS87 1388 aa22.43■■□□□ 1.18
COL2A1-209ENST00000546974 DAPK1P53355 1430 aa22.42■■□□□ 1.18
COL2A1-209ENST00000546974 IQSEC2Q5JU85 1478 aa22.41■■□□□ 1.18
COL2A1-209ENST00000546974 NLRP1Q9C000 1473 aa22.41■■□□□ 1.18
COL2A1-209ENST00000546974 RRP7BPQ9NSQ0 103 aa22.4■■□□□ 1.18
COL2A1-209ENST00000546974 ERBINQ96RT1 1412 aa22.4■■□□□ 1.18
COL2A1-209ENST00000546974 CEP152O94986 1710 aa22.39■■□□□ 1.17
COL2A1-209ENST00000546974 SPATA31D1Q6ZQQ2 1576 aa22.38■■□□□ 1.17
COL2A1-209ENST00000546974 POLR1AO95602 1720 aaPredicted RBP22.38■■□□□ 1.17
COL2A1-209ENST00000546974 THEMISQ8N1K5 641 aaPredicted RBP22.38■■□□□ 1.17
COL2A1-209ENST00000546974 CFAP65Q6ZU64 1925 aaKnown RBP22.37■■□□□ 1.17
COL2A1-209ENST00000546974 ZNF335Q9H4Z2 1342 aaPredicted RBP22.37■■□□□ 1.17
COL2A1-209ENST00000546974 UGGT1Q9NYU2 1555 aa22.36■■□□□ 1.17
COL2A1-209ENST00000546974 ERVK-7P63135 1459 aa22.35■■□□□ 1.17
COL2A1-209ENST00000546974 PRDM15P57071 1507 aaPredicted RBP22.35■■□□□ 1.17
COL2A1-209ENST00000546974 ANKRD30AQ9BXX3 1397 aa22.35■■□□□ 1.17
COL2A1-209ENST00000546974 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.35■■□□□ 1.17
COL2A1-209ENST00000546974 ANKLE2Q86XL3 938 aa22.34■■□□□ 1.17
COL2A1-209ENST00000546974 NEURL4Q96JN8 1562 aa22.33■■□□□ 1.17
COL2A1-209ENST00000546974 CHIC2Q9UKJ5 165 aa22.33■■□□□ 1.17
COL2A1-209ENST00000546974 DEPDC5O75140 1603 aa22.32■■□□□ 1.16
COL2A1-209ENST00000546974 ARHGAP31Q2M1Z3 1444 aa22.31■■□□□ 1.16
COL2A1-209ENST00000546974 KANK1Q14678 1352 aa22.28■■□□□ 1.16
COL2A1-209ENST00000546974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.28■■□□□ 1.16
COL2A1-209ENST00000546974 MED14O60244 1454 aa22.28■■□□□ 1.16
COL2A1-209ENST00000546974 ADGRL2O95490 1459 aa22.28■■□□□ 1.16
COL2A1-209ENST00000546974 FAM50AQ14320 339 aaKnown RBP22.27■■□□□ 1.16
COL2A1-209ENST00000546974 NPHP4O75161 1426 aaPredicted RBP22.24■■□□□ 1.15
COL2A1-209ENST00000546974 UBR1Q8IWV7 1749 aa22.24■■□□□ 1.15
COL2A1-209ENST00000546974 LMTK2Q8IWU2 1503 aa22.24■■□□□ 1.15
COL2A1-209ENST00000546974 VWDEQ8N2E2 1590 aa22.23■■□□□ 1.15
COL2A1-209ENST00000546974 CPS1P31327 1500 aa22.22■■□□□ 1.15
COL2A1-209ENST00000546974 IQGAP1P46940 1657 aa22.21■■□□□ 1.15
COL2A1-209ENST00000546974 UBAP1LF5GYI3 381 aa22.2■■□□□ 1.14
COL2A1-209ENST00000546974 ANKRD50Q9ULJ7 1429 aa22.17■■□□□ 1.14
COL2A1-209ENST00000546974 SLIT1O75093 1534 aa22.16■■□□□ 1.14
COL2A1-209ENST00000546974 ARHGAP23Q9P227 1491 aa22.16■■□□□ 1.14
COL2A1-209ENST00000546974 PIK3C2BO00750 1634 aa22.15■■□□□ 1.14
COL2A1-209ENST00000546974 EFCAB6Q5THR3 1501 aa22.15■■□□□ 1.14
COL2A1-209ENST00000546974 SCAF11Q99590 1463 aaKnown RBP22.15■■□□□ 1.14
COL2A1-209ENST00000546974 TXNDC2Q86VQ3 553 aa22.13■■□□□ 1.13
COL2A1-209ENST00000546974 KDM5AP29375 1690 aaKnown RBP22.13■■□□□ 1.13
COL2A1-209ENST00000546974 LTKP29376 864 aa22.12■■□□□ 1.13
COL2A1-209ENST00000546974 IDI1Q13907 227 aa22.12■■□□□ 1.13
COL2A1-209ENST00000546974 NOS1P29475 1434 aa22.12■■□□□ 1.13
COL2A1-209ENST00000546974 STAG3Q9UJ98 1225 aa22.11■■□□□ 1.13
COL2A1-209ENST00000546974 EID1Q9Y6B2 187 aa22.11■■□□□ 1.13
COL2A1-209ENST00000546974 SYNMO15061 1565 aa22.11■■□□□ 1.13
COL2A1-209ENST00000546974 ROCK1Q13464 1354 aa22.1■■□□□ 1.13
COL2A1-209ENST00000546974 STRCP1A6NGW2 1772 aa22.1■■□□□ 1.13
COL2A1-209ENST00000546974 TOM1O60784 492 aa22.09■■□□□ 1.13
COL2A1-209ENST00000546974 TMEM2Q9UHN6 1383 aa22.09■■□□□ 1.13
COL2A1-209ENST00000546974 RPRD2Q5VT52 1461 aaKnown RBP22.09■■□□□ 1.13
COL2A1-209ENST00000546974 SLC52A1Q9NWF4 448 aa22.08■■□□□ 1.13
COL2A1-209ENST00000546974 TET3O43151 1660 aa22.07■■□□□ 1.12
COL2A1-209ENST00000546974 UNC13BO14795 1591 aa22.06■■□□□ 1.12
COL2A1-209ENST00000546974 DISP3Q9P2K9 1392 aa22.04■■□□□ 1.12
COL2A1-209ENST00000546974 PPARGC1BQ86YN6 1023 aaKnown RBP22.04■■□□□ 1.12
COL2A1-209ENST00000546974 LRRC7Q96NW7 1537 aa22.04■■□□□ 1.12
COL2A1-209ENST00000546974 GCC2Q8IWJ2 1684 aa22.04■■□□□ 1.12
COL2A1-209ENST00000546974 ADGRB3O60242 1522 aa22.03■■□□□ 1.12
COL2A1-209ENST00000546974 PIP4K2BP78356 416 aa22.02■■□□□ 1.12
COL2A1-209ENST00000546974 SCAF1Q9H7N4 1312 aaKnown RBP22.01■■□□□ 1.11
COL2A1-209ENST00000546974 ITGAEP38570 1179 aa22■■□□□ 1.11
COL2A1-209ENST00000546974 IQGAP3Q86VI3 1631 aa21.98■■□□□ 1.11
COL2A1-209ENST00000546974 ALKQ9UM73 1620 aa21.98■■□□□ 1.11
COL2A1-209ENST00000546974 E9PCH4 1651 aa21.96■■□□□ 1.11
COL2A1-209ENST00000546974 MYO5BQ9ULV0 1848 aa21.96■■□□□ 1.11
COL2A1-209ENST00000546974 HSPA1LP34931 641 aa21.95■■□□□ 1.1
COL2A1-209ENST00000546974 NUP155O75694 1391 aa21.94■■□□□ 1.1
COL2A1-209ENST00000546974 TMEM131LA2VDJ0 1609 aa21.93■■□□□ 1.1
COL2A1-209ENST00000546974 XIRP1Q702N8 1843 aaKnown RBP21.93■■□□□ 1.1
COL2A1-209ENST00000546974 HDGFP51858 240 aaKnown RBP21.92■■□□□ 1.1
COL2A1-209ENST00000546974 ZFYVE9O95405 1425 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms