RNA–Protein interactions for RNA: ENST00000546271.1

UBC-214, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-214ENST00000546271 RNF17Q9BXT8 1623 aaKnown RBP18.6■□□□□ 0.57
UBC-214ENST00000546271 FAM135AQ9P2D6 1515 aa18.6■□□□□ 0.57
UBC-214ENST00000546271 KIF3BO15066 747 aa18.6■□□□□ 0.57
UBC-214ENST00000546271 PPP6R1Q9UPN7 881 aa18.6■□□□□ 0.57
UBC-214ENST00000546271 ZC3H13Q5T200 1668 aaKnown RBP18.6■□□□□ 0.57
UBC-214ENST00000546271 ABCC5O15440 1437 aa18.59■□□□□ 0.57
UBC-214ENST00000546271 PTPRKQ15262 1439 aa18.59■□□□□ 0.57
UBC-214ENST00000546271 CEP152O94986 1710 aa18.59■□□□□ 0.57
UBC-214ENST00000546271 FBXO41Q8TF61 875 aa18.58■□□□□ 0.56
UBC-214ENST00000546271 DNMT1P26358 1616 aaKnown RBP18.57■□□□□ 0.56
UBC-214ENST00000546271 DAPK1P53355 1430 aa18.57■□□□□ 0.56
UBC-214ENST00000546271 NCOA1Q15788 1441 aa18.57■□□□□ 0.56
UBC-214ENST00000546271 SHANK2Q9UPX8 1470 aa18.56■□□□□ 0.56
UBC-214ENST00000546271 POLR1AO95602 1720 aaPredicted RBP18.54■□□□□ 0.56
UBC-214ENST00000546271 DMRT2Q9Y5R5 561 aa18.53■□□□□ 0.56
UBC-214ENST00000546271 DUOX2Q9NRD8 1548 aa18.53■□□□□ 0.56
UBC-214ENST00000546271 MROH1Q8NDA8 1641 aa18.52■□□□□ 0.56
UBC-214ENST00000546271 PZPP20742 1482 aa18.52■□□□□ 0.56
UBC-214ENST00000546271 PTPRTO14522 1441 aa18.52■□□□□ 0.56
UBC-214ENST00000546271 KIF15Q9NS87 1388 aa18.51■□□□□ 0.55
UBC-214ENST00000546271 ABCC3O15438 1527 aa18.5■□□□□ 0.55
UBC-214ENST00000546271 FAM50AQ14320 339 aaKnown RBP18.5■□□□□ 0.55
UBC-214ENST00000546271 RRP7BPQ9NSQ0 103 aa18.5■□□□□ 0.55
UBC-214ENST00000546271 A2ML1A8K2U0 1454 aa18.5■□□□□ 0.55
UBC-214ENST00000546271 WASHC2CQ9Y4E1 1318 aa18.49■□□□□ 0.55
UBC-214ENST00000546271 CERKQ8TCT0 537 aa18.49■□□□□ 0.55
UBC-214ENST00000546271 PLA2R1Q13018 1463 aa18.48■□□□□ 0.55
UBC-214ENST00000546271 TNRQ92752 1358 aa18.48■□□□□ 0.55
UBC-214ENST00000546271 PPARGC1BQ86YN6 1023 aaKnown RBP18.47■□□□□ 0.55
UBC-214ENST00000546271 CHIC2Q9UKJ5 165 aa18.47■□□□□ 0.55
UBC-214ENST00000546271 ANKRD30AQ9BXX3 1397 aa18.46■□□□□ 0.55
UBC-214ENST00000546271 PRDM15P57071 1507 aaPredicted RBP18.46■□□□□ 0.55
UBC-214ENST00000546271 ERBINQ96RT1 1412 aa18.46■□□□□ 0.55
UBC-214ENST00000546271 DEPDC5O75140 1603 aa18.45■□□□□ 0.54
UBC-214ENST00000546271 NCKAP5LQ9HCH0 1330 aa18.45■□□□□ 0.54
UBC-214ENST00000546271 CFAP65Q6ZU64 1925 aaKnown RBP18.45■□□□□ 0.54
UBC-214ENST00000546271 FBXO31Q5XUX0 539 aaPredicted RBP18.44■□□□□ 0.54
UBC-214ENST00000546271 SPATA31D1Q6ZQQ2 1576 aa18.43■□□□□ 0.54
UBC-214ENST00000546271 LTBP4Q8N2S1 1624 aa18.43■□□□□ 0.54
UBC-214ENST00000546271 ADGRL2O95490 1459 aa18.43■□□□□ 0.54
UBC-214ENST00000546271 NLRP1Q9C000 1473 aa18.41■□□□□ 0.54
UBC-214ENST00000546271 NEURL4Q96JN8 1562 aa18.41■□□□□ 0.54
UBC-214ENST00000546271 UGGT1Q9NYU2 1555 aa18.41■□□□□ 0.54
UBC-214ENST00000546271 ERVK-7P63135 1459 aa18.4■□□□□ 0.54
UBC-214ENST00000546271 PKD2Q13563 968 aa18.38■□□□□ 0.53
UBC-214ENST00000546271 UBR1Q8IWV7 1749 aa18.37■□□□□ 0.53
UBC-214ENST00000546271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.36■□□□□ 0.536e-16■□□□□ 10.3
UBC-214ENST00000546271 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.36■□□□□ 0.531e-15■■■□□ 15.4
UBC-214ENST00000546271 IQGAP1P46940 1657 aa18.35■□□□□ 0.53
UBC-214ENST00000546271 ZNF335Q9H4Z2 1342 aaPredicted RBP18.34■□□□□ 0.53
UBC-214ENST00000546271 IQSEC2Q5JU85 1478 aa18.33■□□□□ 0.53
UBC-214ENST00000546271 ANKRD50Q9ULJ7 1429 aa18.33■□□□□ 0.53
UBC-214ENST00000546271 KANK1Q14678 1352 aa18.33■□□□□ 0.53
UBC-214ENST00000546271 ROCK1Q13464 1354 aa18.32■□□□□ 0.52
UBC-214ENST00000546271 PIK3C2BO00750 1634 aa18.32■□□□□ 0.52
UBC-214ENST00000546271 ARHGAP31Q2M1Z3 1444 aa18.32■□□□□ 0.52
UBC-214ENST00000546271 ITGAEP38570 1179 aa18.31■□□□□ 0.52
UBC-214ENST00000546271 VWDEQ8N2E2 1590 aa18.3■□□□□ 0.52
UBC-214ENST00000546271 EFCAB6Q5THR3 1501 aa18.3■□□□□ 0.52
UBC-214ENST00000546271 RRBP1Q9P2E9 1410 aaKnown RBP18.3■□□□□ 0.52
UBC-214ENST00000546271 LMTK2Q8IWU2 1503 aa18.29■□□□□ 0.52
UBC-214ENST00000546271 THEMISQ8N1K5 641 aaPredicted RBP18.28■□□□□ 0.52
UBC-214ENST00000546271 NPHP4O75161 1426 aaPredicted RBP18.27■□□□□ 0.52
UBC-214ENST00000546271 GCC2Q8IWJ2 1684 aa18.27■□□□□ 0.52
UBC-214ENST00000546271 UNC13BO14795 1591 aa18.26■□□□□ 0.51
UBC-214ENST00000546271 SYNMO15061 1565 aa18.26■□□□□ 0.51
UBC-214ENST00000546271 ANKLE2Q86XL3 938 aa18.26■□□□□ 0.51
UBC-214ENST00000546271 TET3O43151 1660 aa18.25■□□□□ 0.51
UBC-214ENST00000546271 MED14O60244 1454 aa18.25■□□□□ 0.51
UBC-214ENST00000546271 CPS1P31327 1500 aa18.24■□□□□ 0.51
UBC-214ENST00000546271 KDM5AP29375 1690 aaKnown RBP18.24■□□□□ 0.51
UBC-214ENST00000546271 STRCP1A6NGW2 1772 aa18.22■□□□□ 0.51
UBC-214ENST00000546271 SCAF11Q99590 1463 aaKnown RBP18.21■□□□□ 0.51
UBC-214ENST00000546271 MYO5BQ9ULV0 1848 aa18.21■□□□□ 0.51
UBC-214ENST00000546271 ADGRB3O60242 1522 aa18.2■□□□□ 0.5
UBC-214ENST00000546271 SLIT1O75093 1534 aa18.2■□□□□ 0.5
UBC-214ENST00000546271 NOS1P29475 1434 aa18.19■□□□□ 0.5
UBC-214ENST00000546271 ARHGAP23Q9P227 1491 aa18.19■□□□□ 0.5
UBC-214ENST00000546271 E9PCH4 1651 aa18.18■□□□□ 0.5
UBC-214ENST00000546271 UBAP1LF5GYI3 381 aa18.18■□□□□ 0.5
UBC-214ENST00000546271 IQGAP3Q86VI3 1631 aa18.18■□□□□ 0.5
UBC-214ENST00000546271 RPRD2Q5VT52 1461 aaKnown RBP18.18■□□□□ 0.5
UBC-214ENST00000546271 STAG3Q9UJ98 1225 aa18.17■□□□□ 0.5
UBC-214ENST00000546271 IDI1Q13907 227 aa18.15■□□□□ 0.5
UBC-214ENST00000546271 NUP155O75694 1391 aa18.15■□□□□ 0.5
UBC-214ENST00000546271 NAIPQ13075 1403 aa18.13■□□□□ 0.49
UBC-214ENST00000546271 TXNDC2Q86VQ3 553 aa18.12■□□□□ 0.49
UBC-214ENST00000546271 SLC52A1Q9NWF4 448 aa18.12■□□□□ 0.49
UBC-214ENST00000546271 SCAF1Q9H7N4 1312 aaKnown RBP18.12■□□□□ 0.49
UBC-214ENST00000546271 EID1Q9Y6B2 187 aa18.11■□□□□ 0.49
UBC-214ENST00000546271 TMEM2Q9UHN6 1383 aa18.11■□□□□ 0.49
UBC-214ENST00000546271 XIRP1Q702N8 1843 aaKnown RBP18.09■□□□□ 0.49
UBC-214ENST00000546271 TMEM131LA2VDJ0 1609 aa18.09■□□□□ 0.49
UBC-214ENST00000546271 LTKP29376 864 aa18.09■□□□□ 0.49
UBC-214ENST00000546271 SPHKAPQ2M3C7 1700 aa18.09■□□□□ 0.49
UBC-214ENST00000546271 LRRC7Q96NW7 1537 aa18.08■□□□□ 0.49
UBC-214ENST00000546271 HFM1A2PYH4 1435 aa18.08■□□□□ 0.49
UBC-214ENST00000546271 PIP4K2BP78356 416 aa18.07■□□□□ 0.48
UBC-214ENST00000546271 DISP3Q9P2K9 1392 aa18.05■□□□□ 0.48
UBC-214ENST00000546271 ALKQ9UM73 1620 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms