RNA–Protein interactions for RNA: ENST00000545869.5

PDCD2-214, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-214ENST00000545869 PKD2Q13563 968 aa37.72■■■■□ 3.63
PDCD2-214ENST00000545869 KIF3BO15066 747 aa37.65■■■■□ 3.62
PDCD2-214ENST00000545869 FBXO31Q5XUX0 539 aaPredicted RBP37.65■■■■□ 3.62
PDCD2-214ENST00000545869 KDM5DQ9BY66 1539 aa37.65■■■■□ 3.62
PDCD2-214ENST00000545869 NEURL4Q96JN8 1562 aa37.63■■■■□ 3.61
PDCD2-214ENST00000545869 PZPP20742 1482 aa37.62■■■■□ 3.61
PDCD2-214ENST00000545869 ARHGEF5Q12774 1597 aa37.6■■■■□ 3.61
PDCD2-214ENST00000545869 TNRQ92752 1358 aa37.6■■■■□ 3.61
PDCD2-214ENST00000545869 POLR1AO95602 1720 aaPredicted RBP37.6■■■■□ 3.61
PDCD2-214ENST00000545869 FAM135AQ9P2D6 1515 aa37.58■■■■□ 3.61
PDCD2-214ENST00000545869 UBAP1LF5GYI3 381 aa37.55■■■■□ 3.6
PDCD2-214ENST00000545869 RSPH4AQ5TD94 716 aa37.5■■■■□ 3.59
PDCD2-214ENST00000545869 SOCS7O14512 581 aa37.49■■■■□ 3.59
PDCD2-214ENST00000545869 WASHC2CQ9Y4E1 1318 aa37.49■■■■□ 3.59
PDCD2-214ENST00000545869 LRRC9Q6ZRR7 1453 aa37.49■■■■□ 3.59
PDCD2-214ENST00000545869 RNF17Q9BXT8 1623 aaKnown RBP37.46■■■■□ 3.59
PDCD2-214ENST00000545869 VPS8Q8N3P4 1428 aa37.45■■■■□ 3.59
PDCD2-214ENST00000545869 MIA2Q96PC5 1412 aa37.44■■■■□ 3.58
PDCD2-214ENST00000545869 MAST1Q9Y2H9 1570 aa37.44■■■■□ 3.58
PDCD2-214ENST00000545869 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.43■■■■□ 3.58
PDCD2-214ENST00000545869 ABCC3O15438 1527 aa37.41■■■■□ 3.58
PDCD2-214ENST00000545869 NLRP1Q9C000 1473 aa37.4■■■■□ 3.58
PDCD2-214ENST00000545869 VWDEQ8N2E2 1590 aa37.4■■■■□ 3.58
PDCD2-214ENST00000545869 SHANK2Q9UPX8 1470 aa37.39■■■■□ 3.58
PDCD2-214ENST00000545869 UGGT1Q9NYU2 1555 aa37.39■■■■□ 3.58
PDCD2-214ENST00000545869 MROH1Q8NDA8 1641 aa37.39■■■■□ 3.58
PDCD2-214ENST00000545869 CPS1P31327 1500 aa37.38■■■■□ 3.57
PDCD2-214ENST00000545869 TSPY4P0CV99 314 aa37.38■■■■□ 3.57
PDCD2-214ENST00000545869 TSPY10P0CW01 314 aa37.38■■■■□ 3.57
PDCD2-214ENST00000545869 KANK4Q5T7N3 995 aaPredicted RBP37.37■■■■□ 3.57
PDCD2-214ENST00000545869 ZC3H13Q5T200 1668 aaKnown RBP37.34■■■■□ 3.57
PDCD2-214ENST00000545869 DEPDC5O75140 1603 aa37.34■■■■□ 3.57
PDCD2-214ENST00000545869 EIF2AK4Q9P2K8 1649 aaKnown RBP37.33■■■■□ 3.57
PDCD2-214ENST00000545869 MED14O60244 1454 aa37.33■■■■□ 3.57
PDCD2-214ENST00000545869 ANKLE2Q86XL3 938 aa37.32■■■■□ 3.56
PDCD2-214ENST00000545869 NPHP4O75161 1426 aaPredicted RBP37.31■■■■□ 3.56
PDCD2-214ENST00000545869 THEMISQ8N1K5 641 aaPredicted RBP37.3■■■■□ 3.56
PDCD2-214ENST00000545869 CEP152O94986 1710 aa37.3■■■■□ 3.56
PDCD2-214ENST00000545869 ERVK-7P63135 1459 aa37.29■■■■□ 3.56
PDCD2-214ENST00000545869 ALKQ9UM73 1620 aa37.28■■■■□ 3.56
PDCD2-214ENST00000545869 MYOM3Q5VTT5 1437 aa37.27■■■■□ 3.56
PDCD2-214ENST00000545869 MAP3K1Q13233 1512 aa37.27■■■■□ 3.56
PDCD2-214ENST00000545869 IQGAP1P46940 1657 aa37.27■■■■□ 3.56
PDCD2-214ENST00000545869 STRCP1A6NGW2 1772 aa37.25■■■■□ 3.55
PDCD2-214ENST00000545869 HSPA1LP34931 641 aa37.25■■■■□ 3.55
PDCD2-214ENST00000545869 PIP4K2BP78356 416 aa37.23■■■■□ 3.55
PDCD2-214ENST00000545869 CFAP65Q6ZU64 1925 aaKnown RBP37.23■■■■□ 3.55
PDCD2-214ENST00000545869 SCAF1Q9H7N4 1312 aaKnown RBP37.22■■■■□ 3.55
PDCD2-214ENST00000545869 UBR1Q8IWV7 1749 aa37.18■■■■□ 3.54
PDCD2-214ENST00000545869 DUOX2Q9NRD8 1548 aa37.17■■■■□ 3.54
PDCD2-214ENST00000545869 TOM1O60784 492 aa37.16■■■■□ 3.54
PDCD2-214ENST00000545869 MED1Q15648 1581 aaPredicted RBP37.16■■■■□ 3.54
PDCD2-214ENST00000545869 CROCC2H7BZ55 1655 aa37.15■■■■□ 3.54
PDCD2-214ENST00000545869 PRDM15P57071 1507 aaPredicted RBP37.12■■■■□ 3.53
PDCD2-214ENST00000545869 ABCC5O15440 1437 aa37.1■■■■□ 3.53
PDCD2-214ENST00000545869 LRRC7Q96NW7 1537 aa37.1■■■■□ 3.53
PDCD2-214ENST00000545869 KIF15Q9NS87 1388 aa37.09■■■■□ 3.53
PDCD2-214ENST00000545869 PTPN23Q9H3S7 1636 aa37.07■■■■□ 3.52
PDCD2-214ENST00000545869 SYNMO15061 1565 aa37.05■■■■□ 3.52
PDCD2-214ENST00000545869 SCAF11Q99590 1463 aaKnown RBP37.04■■■■□ 3.52
PDCD2-214ENST00000545869 ARHGAP23Q9P227 1491 aa37.04■■■■□ 3.52
PDCD2-214ENST00000545869 ARHGAP31Q2M1Z3 1444 aa37.03■■■■□ 3.52
PDCD2-214ENST00000545869 ERBINQ96RT1 1412 aa37.03■■■■□ 3.52
PDCD2-214ENST00000545869 SLIT1O75093 1534 aa37.01■■■■□ 3.52
PDCD2-214ENST00000545869 LTKP29376 864 aa37■■■■□ 3.51
PDCD2-214ENST00000545869 RRP7BPQ9NSQ0 103 aa37■■■■□ 3.51
PDCD2-214ENST00000545869 DAPK1P53355 1430 aa36.99■■■■□ 3.51
PDCD2-214ENST00000545869 PIK3C2BO00750 1634 aa36.98■■■■□ 3.51
PDCD2-214ENST00000545869 XIRP1Q702N8 1843 aaKnown RBP36.94■■■■□ 3.5
PDCD2-214ENST00000545869 FGD6Q6ZV73 1430 aa36.92■■■■□ 3.5
PDCD2-214ENST00000545869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.91■■■■□ 3.5
PDCD2-214ENST00000545869 TXNDC2Q86VQ3 553 aa36.9■■■■□ 3.5
PDCD2-214ENST00000545869 SENP3Q9H4L4 574 aaPredicted RBP36.9■■■■□ 3.5
PDCD2-214ENST00000545869 LMTK2Q8IWU2 1503 aa36.85■■■■□ 3.49
PDCD2-214ENST00000545869 TMEM2Q9UHN6 1383 aa36.83■■■■□ 3.49
PDCD2-214ENST00000545869 APLP2Q06481 763 aa36.83■■■■□ 3.49
PDCD2-214ENST00000545869 CHIC2Q9UKJ5 165 aa36.82■■■■□ 3.48
PDCD2-214ENST00000545869 KDM5AP29375 1690 aaKnown RBP36.8■■■■□ 3.48
PDCD2-214ENST00000545869 EFCAB6Q5THR3 1501 aa36.79■■■■□ 3.48
PDCD2-214ENST00000545869 KANK1Q14678 1352 aa36.78■■■■□ 3.48
PDCD2-214ENST00000545869 ANKRD30AQ9BXX3 1397 aa36.78■■■■□ 3.48
PDCD2-214ENST00000545869 IDI1Q13907 227 aa36.76■■■■□ 3.48
PDCD2-214ENST00000545869 EID1Q9Y6B2 187 aa36.76■■■■□ 3.48
PDCD2-214ENST00000545869 NOS1P29475 1434 aa36.74■■■■□ 3.47
PDCD2-214ENST00000545869 TET3O43151 1660 aa36.72■■■■□ 3.47
PDCD2-214ENST00000545869 ADGRL2O95490 1459 aa36.71■■■■□ 3.47
PDCD2-214ENST00000545869 PHF23Q9BUL5 403 aaPredicted RBP36.71■■■■□ 3.47
PDCD2-214ENST00000545869 ADGRB3O60242 1522 aa36.69■■■■□ 3.46
PDCD2-214ENST00000545869 STAG3Q9UJ98 1225 aa36.69■■■■□ 3.46
PDCD2-214ENST00000545869 TMEM94Q12767 1356 aa36.66■■■■□ 3.46
PDCD2-214ENST00000545869 SLC26A8Q96RN1 970 aa36.63■■■■□ 3.45
PDCD2-214ENST00000545869 RBM33Q96EV2 1170 aaKnown RBP36.6■■■■□ 3.45
PDCD2-214ENST00000545869 NWD1Q149M9 1564 aa36.6■■■■□ 3.45
PDCD2-214ENST00000545869 MYO5BQ9ULV0 1848 aa36.59■■■■□ 3.45
PDCD2-214ENST00000545869 KCNA6P17658 529 aa36.59■■■■□ 3.45
PDCD2-214ENST00000545869 FAM135BQ49AJ0 1406 aa36.59■■■■□ 3.45
PDCD2-214ENST00000545869 RGS17Q9UGC6 210 aaPredicted RBP36.58■■■■□ 3.45
PDCD2-214ENST00000545869 ANKRD50Q9ULJ7 1429 aa36.56■■■■□ 3.44
PDCD2-214ENST00000545869 ROBO1Q9Y6N7 1651 aa36.54■■■■□ 3.44
PDCD2-214ENST00000545869 FAM50AQ14320 339 aaKnown RBP36.53■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms