RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 PIP4K2BP78356 416 aa18.65■□□□□ 0.58
TMEM258-208ENST00000545210 CPS1P31327 1500 aa18.64■□□□□ 0.58
TMEM258-208ENST00000545210 EHBP1L1Q8N3D4 1523 aa18.64■□□□□ 0.58
TMEM258-208ENST00000545210 FBXO31Q5XUX0 539 aaPredicted RBP18.64■□□□□ 0.57
TMEM258-208ENST00000545210 DHX29Q7Z478 1369 aaKnown RBP18.64■□□□□ 0.57
TMEM258-208ENST00000545210 KDM5DQ9BY66 1539 aa18.64■□□□□ 0.57
TMEM258-208ENST00000545210 HSPA1LP34931 641 aa18.63■□□□□ 0.57
TMEM258-208ENST00000545210 TNRQ92752 1358 aa18.63■□□□□ 0.57
TMEM258-208ENST00000545210 SHANK2Q9UPX8 1470 aa18.63■□□□□ 0.57
TMEM258-208ENST00000545210 PZPP20742 1482 aa18.62■□□□□ 0.57
TMEM258-208ENST00000545210 KIF3BO15066 747 aa18.61■□□□□ 0.57
TMEM258-208ENST00000545210 VWDEQ8N2E2 1590 aa18.6■□□□□ 0.57
TMEM258-208ENST00000545210 TOM1O60784 492 aa18.6■□□□□ 0.57
TMEM258-208ENST00000545210 FAM135AQ9P2D6 1515 aa18.59■□□□□ 0.57
TMEM258-208ENST00000545210 CCDC141Q6ZP82 1450 aa18.58■□□□□ 0.57
TMEM258-208ENST00000545210 CEP162Q5TB80 1403 aa18.58■□□□□ 0.57
TMEM258-208ENST00000545210 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.58■□□□□ 0.573e-7■□□□□ 11
TMEM258-208ENST00000545210 DEPDC5O75140 1603 aa18.58■□□□□ 0.56
TMEM258-208ENST00000545210 STRCP1A6NGW2 1772 aa18.58■□□□□ 0.56
TMEM258-208ENST00000545210 IQGAP1P46940 1657 aa18.57■□□□□ 0.56
TMEM258-208ENST00000545210 WASHC2CQ9Y4E1 1318 aa18.57■□□□□ 0.56
TMEM258-208ENST00000545210 UGGT1Q9NYU2 1555 aa18.57■□□□□ 0.56
TMEM258-208ENST00000545210 CAMSAP2Q08AD1 1489 aa18.57■□□□□ 0.56
TMEM258-208ENST00000545210 ALKQ9UM73 1620 aa18.56■□□□□ 0.56
TMEM258-208ENST00000545210 ANKLE2Q86XL3 938 aa18.56■□□□□ 0.56
TMEM258-208ENST00000545210 NLRP1Q9C000 1473 aa18.55■□□□□ 0.56
TMEM258-208ENST00000545210 CFAP65Q6ZU64 1925 aaKnown RBP18.55■□□□□ 0.56
TMEM258-208ENST00000545210 THEMISQ8N1K5 641 aaPredicted RBP18.54■□□□□ 0.56
TMEM258-208ENST00000545210 MIA2Q96PC5 1412 aa18.54■□□□□ 0.56
TMEM258-208ENST00000545210 MED14O60244 1454 aa18.53■□□□□ 0.56
TMEM258-208ENST00000545210 NPHP4O75161 1426 aaPredicted RBP18.53■□□□□ 0.56
TMEM258-208ENST00000545210 NCOA2Q15596 1464 aa18.52■□□□□ 0.56
TMEM258-208ENST00000545210 ARHGEF5Q12774 1597 aa18.51■□□□□ 0.55
TMEM258-208ENST00000545210 ZC3H13Q5T200 1668 aaKnown RBP18.51■□□□□ 0.55
TMEM258-208ENST00000545210 RNF17Q9BXT8 1623 aaKnown RBP18.51■□□□□ 0.55
TMEM258-208ENST00000545210 CEP152O94986 1710 aa18.49■□□□□ 0.55
TMEM258-208ENST00000545210 SYNMO15061 1565 aa18.48■□□□□ 0.55
TMEM258-208ENST00000545210 RSPH4AQ5TD94 716 aa18.48■□□□□ 0.55
TMEM258-208ENST00000545210 UBR1Q8IWV7 1749 aa18.47■□□□□ 0.55
TMEM258-208ENST00000545210 PHF23Q9BUL5 403 aaPredicted RBP18.47■□□□□ 0.55
TMEM258-208ENST00000545210 SENP3Q9H4L4 574 aaPredicted RBP18.47■□□□□ 0.55
TMEM258-208ENST00000545210 ABCC3O15438 1527 aa18.47■□□□□ 0.55
TMEM258-208ENST00000545210 LRRC7Q96NW7 1537 aa18.46■□□□□ 0.55
TMEM258-208ENST00000545210 EIF2AK4Q9P2K8 1649 aaKnown RBP18.45■□□□□ 0.54
TMEM258-208ENST00000545210 XIRP1Q702N8 1843 aaKnown RBP18.44■□□□□ 0.54
TMEM258-208ENST00000545210 TSPY4P0CV99 314 aa18.44■□□□□ 0.54
TMEM258-208ENST00000545210 TSPY10P0CW01 314 aa18.44■□□□□ 0.54
TMEM258-208ENST00000545210 MAST1Q9Y2H9 1570 aa18.43■□□□□ 0.54
TMEM258-208ENST00000545210 MROH1Q8NDA8 1641 aa18.43■□□□□ 0.54
TMEM258-208ENST00000545210 ERVK-7P63135 1459 aa18.42■□□□□ 0.54
TMEM258-208ENST00000545210 SCAF11Q99590 1463 aaKnown RBP18.36■□□□□ 0.53
TMEM258-208ENST00000545210 LRRC9Q6ZRR7 1453 aa18.35■□□□□ 0.53
TMEM258-208ENST00000545210 SLIT1O75093 1534 aa18.33■□□□□ 0.53
TMEM258-208ENST00000545210 PIK3C2BO00750 1634 aa18.33■□□□□ 0.52
TMEM258-208ENST00000545210 DUOX2Q9NRD8 1548 aa18.33■□□□□ 0.52
TMEM258-208ENST00000545210 ARHGAP23Q9P227 1491 aa18.33■□□□□ 0.52
TMEM258-208ENST00000545210 CROCC2H7BZ55 1655 aa18.32■□□□□ 0.52
TMEM258-208ENST00000545210 LTKP29376 864 aa18.32■□□□□ 0.52
TMEM258-208ENST00000545210 PRDM15P57071 1507 aaPredicted RBP18.3■□□□□ 0.52
TMEM258-208ENST00000545210 TXNDC2Q86VQ3 553 aa18.3■□□□□ 0.52
TMEM258-208ENST00000545210 RGS17Q9UGC6 210 aaPredicted RBP18.29■□□□□ 0.52
TMEM258-208ENST00000545210 MYOM3Q5VTT5 1437 aa18.27■□□□□ 0.52
TMEM258-208ENST00000545210 KDM5AP29375 1690 aaKnown RBP18.27■□□□□ 0.52
TMEM258-208ENST00000545210 ARHGAP31Q2M1Z3 1444 aa18.26■□□□□ 0.51
TMEM258-208ENST00000545210 VPS8Q8N3P4 1428 aa18.26■□□□□ 0.51
TMEM258-208ENST00000545210 EID1Q9Y6B2 187 aa18.26■□□□□ 0.51
TMEM258-208ENST00000545210 ROBO1Q9Y6N7 1651 aa18.25■□□□□ 0.51
TMEM258-208ENST00000545210 KANK4Q5T7N3 995 aaPredicted RBP18.25■□□□□ 0.51
TMEM258-208ENST00000545210 KIF15Q9NS87 1388 aa18.24■□□□□ 0.51
TMEM258-208ENST00000545210 FAM135BQ49AJ0 1406 aa18.23■□□□□ 0.51
TMEM258-208ENST00000545210 ERBINQ96RT1 1412 aa18.23■□□□□ 0.51
TMEM258-208ENST00000545210 TMEM2Q9UHN6 1383 aa18.22■□□□□ 0.51
TMEM258-208ENST00000545210 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.22■□□□□ 0.51
TMEM258-208ENST00000545210 MAP3K1Q13233 1512 aa18.22■□□□□ 0.51
TMEM258-208ENST00000545210 EFCAB6Q5THR3 1501 aa18.22■□□□□ 0.51
TMEM258-208ENST00000545210 PTPN23Q9H3S7 1636 aa18.21■□□□□ 0.51
TMEM258-208ENST00000545210 RRP7BPQ9NSQ0 103 aa18.21■□□□□ 0.51
TMEM258-208ENST00000545210 STAG3Q9UJ98 1225 aa18.2■□□□□ 0.5
TMEM258-208ENST00000545210 TMEM94Q12767 1356 aa18.19■□□□□ 0.5
TMEM258-208ENST00000545210 TET3O43151 1660 aa18.19■□□□□ 0.5
TMEM258-208ENST00000545210 ABCC5O15440 1437 aa18.18■□□□□ 0.5
TMEM258-208ENST00000545210 MYO5BQ9ULV0 1848 aa18.18■□□□□ 0.5
TMEM258-208ENST00000545210 SETD1AO15047 1707 aaKnown RBP18.18■□□□□ 0.5
TMEM258-208ENST00000545210 PHLPP1O60346 1717 aa18.18■□□□□ 0.5
TMEM258-208ENST00000545210 POTEAQ6S8J7 498 aa18.17■□□□□ 0.5
TMEM258-208ENST00000545210 RBM33Q96EV2 1170 aaKnown RBP18.17■□□□□ 0.5
TMEM258-208ENST00000545210 SLC26A8Q96RN1 970 aa18.17■□□□□ 0.5
TMEM258-208ENST00000545210 KANK1Q14678 1352 aa18.17■□□□□ 0.5
TMEM258-208ENST00000545210 KCNA6P17658 529 aa18.15■□□□□ 0.5
TMEM258-208ENST00000545210 IDI1Q13907 227 aa18.15■□□□□ 0.5
TMEM258-208ENST00000545210 PROSER2Q86WR7 435 aaPredicted RBP18.15■□□□□ 0.5
TMEM258-208ENST00000545210 NWD1Q149M9 1564 aa18.15■□□□□ 0.5
TMEM258-208ENST00000545210 DAPK1P53355 1430 aa18.15■□□□□ 0.5
TMEM258-208ENST00000545210 ADGRB3O60242 1522 aa18.14■□□□□ 0.49
TMEM258-208ENST00000545210 LMTK2Q8IWU2 1503 aa18.14■□□□□ 0.49
TMEM258-208ENST00000545210 CHD2O14647 1828 aaKnown RBP18.14■□□□□ 0.49
TMEM258-208ENST00000545210 LOC105371045A0A1W2PR82 267 aa18.13■□□□□ 0.49
TMEM258-208ENST00000545210 NKTRP30414 1462 aaKnown RBP18.13■□□□□ 0.49
TMEM258-208ENST00000545210 GCC2Q8IWJ2 1684 aa18.1■□□□□ 0.49
TMEM258-208ENST00000545210 NOS1P29475 1434 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms