RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 RTEL1-TNFRSF6BF6WH68 1400 aa19■□□□□ 0.63
GABPB1-206ENST00000543881 HSPA1LP34931 641 aa19■□□□□ 0.63
GABPB1-206ENST00000543881 DHX29Q7Z478 1369 aaKnown RBP19■□□□□ 0.63
GABPB1-206ENST00000543881 CPS1P31327 1500 aa18.99■□□□□ 0.63
GABPB1-206ENST00000543881 FBXO31Q5XUX0 539 aaPredicted RBP18.99■□□□□ 0.63
GABPB1-206ENST00000543881 TNRQ92752 1358 aa18.99■□□□□ 0.63
GABPB1-206ENST00000543881 NEURL4Q96JN8 1562 aa18.98■□□□□ 0.63
GABPB1-206ENST00000543881 TOM1O60784 492 aa18.98■□□□□ 0.63
GABPB1-206ENST00000543881 EHBP1L1Q8N3D4 1523 aa18.98■□□□□ 0.63
GABPB1-206ENST00000543881 SHANK2Q9UPX8 1470 aa18.97■□□□□ 0.63
GABPB1-206ENST00000543881 KIF3BO15066 747 aa18.97■□□□□ 0.63
GABPB1-206ENST00000543881 MED1Q15648 1581 aaPredicted RBP18.96■□□□□ 0.63
GABPB1-206ENST00000543881 PZPP20742 1482 aa18.95■□□□□ 0.62
GABPB1-206ENST00000543881 KDM5DQ9BY66 1539 aa18.94■□□□□ 0.62
GABPB1-206ENST00000543881 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.93■□□□□ 0.623e-6■■□□□ 12.8
GABPB1-206ENST00000543881 ANKLE2Q86XL3 938 aa18.93■□□□□ 0.62
GABPB1-206ENST00000543881 WASHC2CQ9Y4E1 1318 aa18.92■□□□□ 0.62
GABPB1-206ENST00000543881 FAM135AQ9P2D6 1515 aa18.92■□□□□ 0.62
GABPB1-206ENST00000543881 THEMISQ8N1K5 641 aaPredicted RBP18.91■□□□□ 0.62
GABPB1-206ENST00000543881 CCDC141Q6ZP82 1450 aa18.91■□□□□ 0.62
GABPB1-206ENST00000543881 VWDEQ8N2E2 1590 aa18.91■□□□□ 0.62
GABPB1-206ENST00000543881 MIA2Q96PC5 1412 aa18.89■□□□□ 0.62
GABPB1-206ENST00000543881 NCOA2Q15596 1464 aa18.89■□□□□ 0.61
GABPB1-206ENST00000543881 NLRP1Q9C000 1473 aa18.89■□□□□ 0.61
GABPB1-206ENST00000543881 VPS8Q8N3P4 1428 aa18.89■□□□□ 0.61
GABPB1-206ENST00000543881 UGGT1Q9NYU2 1555 aa18.88■□□□□ 0.61
GABPB1-206ENST00000543881 NPHP4O75161 1426 aaPredicted RBP18.88■□□□□ 0.61
GABPB1-206ENST00000543881 DEPDC5O75140 1603 aa18.88■□□□□ 0.61
GABPB1-206ENST00000543881 MED14O60244 1454 aa18.87■□□□□ 0.61
GABPB1-206ENST00000543881 CAMSAP2Q08AD1 1489 aa18.87■□□□□ 0.61
GABPB1-206ENST00000543881 RSPH4AQ5TD94 716 aa18.87■□□□□ 0.61
GABPB1-206ENST00000543881 ALKQ9UM73 1620 aa18.85■□□□□ 0.61
GABPB1-206ENST00000543881 PHF23Q9BUL5 403 aaPredicted RBP18.84■□□□□ 0.61
GABPB1-206ENST00000543881 IQGAP1P46940 1657 aa18.84■□□□□ 0.61
GABPB1-206ENST00000543881 LRRC9Q6ZRR7 1453 aa18.83■□□□□ 0.6
GABPB1-206ENST00000543881 TSPY4P0CV99 314 aa18.82■□□□□ 0.6
GABPB1-206ENST00000543881 TSPY10P0CW01 314 aa18.82■□□□□ 0.6
GABPB1-206ENST00000543881 KANK4Q5T7N3 995 aaPredicted RBP18.81■□□□□ 0.6
GABPB1-206ENST00000543881 STRCP1A6NGW2 1772 aa18.81■□□□□ 0.6
GABPB1-206ENST00000543881 ARHGEF5Q12774 1597 aa18.8■□□□□ 0.6
GABPB1-206ENST00000543881 SENP3Q9H4L4 574 aaPredicted RBP18.79■□□□□ 0.6
GABPB1-206ENST00000543881 LRRC7Q96NW7 1537 aa18.79■□□□□ 0.6
GABPB1-206ENST00000543881 RNF17Q9BXT8 1623 aaKnown RBP18.78■□□□□ 0.6
GABPB1-206ENST00000543881 ABCC3O15438 1527 aa18.78■□□□□ 0.6
GABPB1-206ENST00000543881 MAP3K1Q13233 1512 aa18.77■□□□□ 0.6
GABPB1-206ENST00000543881 ZC3H13Q5T200 1668 aaKnown RBP18.77■□□□□ 0.59
GABPB1-206ENST00000543881 SYNMO15061 1565 aa18.76■□□□□ 0.59
GABPB1-206ENST00000543881 ERVK-7P63135 1459 aa18.75■□□□□ 0.59
GABPB1-206ENST00000543881 CFAP65Q6ZU64 1925 aaKnown RBP18.73■□□□□ 0.59
GABPB1-206ENST00000543881 MAST1Q9Y2H9 1570 aa18.73■□□□□ 0.59
GABPB1-206ENST00000543881 EIF2AK4Q9P2K8 1649 aaKnown RBP18.72■□□□□ 0.59
GABPB1-206ENST00000543881 UBR1Q8IWV7 1749 aa18.71■□□□□ 0.59
GABPB1-206ENST00000543881 CEP152O94986 1710 aa18.7■□□□□ 0.58
GABPB1-206ENST00000543881 MROH1Q8NDA8 1641 aa18.7■□□□□ 0.58
GABPB1-206ENST00000543881 SCAF11Q99590 1463 aaKnown RBP18.69■□□□□ 0.58
GABPB1-206ENST00000543881 MYOM3Q5VTT5 1437 aa18.69■□□□□ 0.58
GABPB1-206ENST00000543881 LTKP29376 864 aa18.67■□□□□ 0.58
GABPB1-206ENST00000543881 TXNDC2Q86VQ3 553 aa18.66■□□□□ 0.58
GABPB1-206ENST00000543881 ARHGAP23Q9P227 1491 aa18.66■□□□□ 0.58
GABPB1-206ENST00000543881 XIRP1Q702N8 1843 aaKnown RBP18.65■□□□□ 0.58
GABPB1-206ENST00000543881 RGS17Q9UGC6 210 aaPredicted RBP18.65■□□□□ 0.58
GABPB1-206ENST00000543881 SLIT1O75093 1534 aa18.65■□□□□ 0.58
GABPB1-206ENST00000543881 DUOX2Q9NRD8 1548 aa18.63■□□□□ 0.57
GABPB1-206ENST00000543881 EID1Q9Y6B2 187 aa18.63■□□□□ 0.57
GABPB1-206ENST00000543881 ARHGAP31Q2M1Z3 1444 aa18.62■□□□□ 0.57
GABPB1-206ENST00000543881 APLP2Q06481 763 aa18.6■□□□□ 0.57
GABPB1-206ENST00000543881 PRDM15P57071 1507 aaPredicted RBP18.6■□□□□ 0.57
GABPB1-206ENST00000543881 FAM135BQ49AJ0 1406 aa18.59■□□□□ 0.57
GABPB1-206ENST00000543881 PIK3C2BO00750 1634 aa18.58■□□□□ 0.56
GABPB1-206ENST00000543881 KIF15Q9NS87 1388 aa18.57■□□□□ 0.56
GABPB1-206ENST00000543881 TMEM2Q9UHN6 1383 aa18.57■□□□□ 0.56
GABPB1-206ENST00000543881 PTPN23Q9H3S7 1636 aa18.56■□□□□ 0.56
GABPB1-206ENST00000543881 ABCC5O15440 1437 aa18.56■□□□□ 0.56
GABPB1-206ENST00000543881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.56■□□□□ 0.567e-8■■■■□ 25
GABPB1-206ENST00000543881 STAG3Q9UJ98 1225 aa18.56■□□□□ 0.56
GABPB1-206ENST00000543881 ERBINQ96RT1 1412 aa18.55■□□□□ 0.56
GABPB1-206ENST00000543881 RRP7BPQ9NSQ0 103 aa18.55■□□□□ 0.56
GABPB1-206ENST00000543881 TMEM94Q12767 1356 aa18.55■□□□□ 0.56
GABPB1-206ENST00000543881 FGD6Q6ZV73 1430 aa18.54■□□□□ 0.56
GABPB1-206ENST00000543881 POTEAQ6S8J7 498 aa18.53■□□□□ 0.56
GABPB1-206ENST00000543881 KCNA6P17658 529 aa18.52■□□□□ 0.56
GABPB1-206ENST00000543881 EFCAB6Q5THR3 1501 aa18.52■□□□□ 0.56
GABPB1-206ENST00000543881 CROCC2H7BZ55 1655 aa18.52■□□□□ 0.56
GABPB1-206ENST00000543881 KDM5AP29375 1690 aaKnown RBP18.52■□□□□ 0.55
GABPB1-206ENST00000543881 ROBO1Q9Y6N7 1651 aa18.52■□□□□ 0.55
GABPB1-206ENST00000543881 DAPK1P53355 1430 aa18.51■□□□□ 0.55
GABPB1-206ENST00000543881 KANK1Q14678 1352 aa18.51■□□□□ 0.55
GABPB1-206ENST00000543881 IDI1Q13907 227 aa18.51■□□□□ 0.55
GABPB1-206ENST00000543881 PROSER2Q86WR7 435 aaPredicted RBP18.51■□□□□ 0.55
GABPB1-206ENST00000543881 SLC26A8Q96RN1 970 aa18.51■□□□□ 0.55
GABPB1-206ENST00000543881 RBM33Q96EV2 1170 aaKnown RBP18.5■□□□□ 0.55
GABPB1-206ENST00000543881 TET3O43151 1660 aa18.5■□□□□ 0.55
GABPB1-206ENST00000543881 LMTK2Q8IWU2 1503 aa18.47■□□□□ 0.55
GABPB1-206ENST00000543881 NKTRP30414 1462 aaKnown RBP18.45■□□□□ 0.54
GABPB1-206ENST00000543881 CHIC2Q9UKJ5 165 aa18.45■□□□□ 0.54
GABPB1-206ENST00000543881 NWD1Q149M9 1564 aa18.44■□□□□ 0.54
GABPB1-206ENST00000543881 NOS1P29475 1434 aa18.43■□□□□ 0.54
GABPB1-206ENST00000543881 BCANQ96GW7 911 aa18.43■□□□□ 0.54
GABPB1-206ENST00000543881 ADGRB3O60242 1522 aa18.43■□□□□ 0.54
GABPB1-206ENST00000543881 MSH6P52701 1360 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms