RNA–Protein interactions for RNA: ENST00000543175.4

PTRH1-208, Transcript of peptidyl-tRNA hydrolase 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTRH1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTRH1-208ENST00000543175 PTPRTO14522 1441 aa37.28■■■■□ 3.56
PTRH1-208ENST00000543175 CEP170BQ9Y4F5 1589 aaPredicted RBP37.28■■■■□ 3.56
PTRH1-208ENST00000543175 APLP2Q06481 763 aa37.27■■■■□ 3.56
PTRH1-208ENST00000543175 CERKQ8TCT0 537 aa37.24■■■■□ 3.55
PTRH1-208ENST00000543175 CROCC2H7BZ55 1655 aa37.22■■■■□ 3.55
PTRH1-208ENST00000543175 RNF17Q9BXT8 1623 aaKnown RBP37.22■■■■□ 3.55
PTRH1-208ENST00000543175 EIF2AK4Q9P2K8 1649 aaKnown RBP37.22■■■■□ 3.55
PTRH1-208ENST00000543175 PTPN23Q9H3S7 1636 aa37.21■■■■□ 3.55
PTRH1-208ENST00000543175 PZPP20742 1482 aa37.17■■■■□ 3.54
PTRH1-208ENST00000543175 ZC3H13Q5T200 1668 aaKnown RBP37.15■■■■□ 3.54
PTRH1-208ENST00000543175 PLA2R1Q13018 1463 aa37.15■■■■□ 3.54
PTRH1-208ENST00000543175 WASHC2CQ9Y4E1 1318 aa37.13■■■■□ 3.54
PTRH1-208ENST00000543175 A2ML1A8K2U0 1454 aa37.12■■■■□ 3.53
PTRH1-208ENST00000543175 SHANK2Q9UPX8 1470 aa37.12■■■■□ 3.53
PTRH1-208ENST00000543175 DNMT1P26358 1616 aaKnown RBP37.11■■■■□ 3.53
PTRH1-208ENST00000543175 DUOX2Q9NRD8 1548 aa37.1■■■■□ 3.53
PTRH1-208ENST00000543175 MROH1Q8NDA8 1641 aa37.09■■■■□ 3.53
PTRH1-208ENST00000543175 FGD6Q6ZV73 1430 aa37.09■■■■□ 3.53
PTRH1-208ENST00000543175 TCOF1Q13428 1488 aaKnown RBP37.07■■■■□ 3.53
PTRH1-208ENST00000543175 TNRQ92752 1358 aa37.07■■■■□ 3.53
PTRH1-208ENST00000543175 ABCC3O15438 1527 aa37.06■■■■□ 3.52
PTRH1-208ENST00000543175 ABCC5O15440 1437 aa37.06■■■■□ 3.52
PTRH1-208ENST00000543175 FBXO31Q5XUX0 539 aaPredicted RBP37.06■■■■□ 3.52
PTRH1-208ENST00000543175 LTBP4Q8N2S1 1624 aa37.06■■■■□ 3.52
PTRH1-208ENST00000543175 CEP152O94986 1710 aa37.04■■■■□ 3.52
PTRH1-208ENST00000543175 NCKAP5LQ9HCH0 1330 aa37.04■■■■□ 3.52
PTRH1-208ENST00000543175 DAPK1P53355 1430 aa37.02■■■■□ 3.52
PTRH1-208ENST00000543175 POLR1AO95602 1720 aaPredicted RBP37.02■■■■□ 3.52
PTRH1-208ENST00000543175 PKD2Q13563 968 aa37.01■■■■□ 3.52
PTRH1-208ENST00000543175 KIF15Q9NS87 1388 aa36.99■■■■□ 3.51
PTRH1-208ENST00000543175 NLRP1Q9C000 1473 aa36.95■■■■□ 3.51
PTRH1-208ENST00000543175 ERBINQ96RT1 1412 aa36.95■■■■□ 3.51
PTRH1-208ENST00000543175 PRDM15P57071 1507 aaPredicted RBP36.95■■■■□ 3.5
PTRH1-208ENST00000543175 SPATA31D1Q6ZQQ2 1576 aa36.94■■■■□ 3.5
PTRH1-208ENST00000543175 DEPDC5O75140 1603 aa36.92■■■■□ 3.5
PTRH1-208ENST00000543175 IQSEC2Q5JU85 1478 aa36.9■■■■□ 3.5
PTRH1-208ENST00000543175 CFAP65Q6ZU64 1925 aaKnown RBP36.89■■■■□ 3.5
PTRH1-208ENST00000543175 NEURL4Q96JN8 1562 aa36.88■■■■□ 3.49
PTRH1-208ENST00000543175 UGGT1Q9NYU2 1555 aa36.88■■■■□ 3.49
PTRH1-208ENST00000543175 RRP7BPQ9NSQ0 103 aa36.88■■■■□ 3.49
PTRH1-208ENST00000543175 ERVK-7P63135 1459 aa36.88■■■■□ 3.49
PTRH1-208ENST00000543175 ZNF335Q9H4Z2 1342 aaPredicted RBP36.84■■■■□ 3.49
PTRH1-208ENST00000543175 ANKRD30AQ9BXX3 1397 aa36.83■■■■□ 3.49
PTRH1-208ENST00000543175 THEMISQ8N1K5 641 aaPredicted RBP36.8■■■■□ 3.48
PTRH1-208ENST00000543175 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.79■■■■□ 3.48
PTRH1-208ENST00000543175 ADGRL2O95490 1459 aa36.78■■■■□ 3.48
PTRH1-208ENST00000543175 CHIC2Q9UKJ5 165 aa36.78■■■■□ 3.48
PTRH1-208ENST00000543175 ARHGAP31Q2M1Z3 1444 aa36.76■■■■□ 3.48
PTRH1-208ENST00000543175 UBR1Q8IWV7 1749 aa36.76■■■■□ 3.47
PTRH1-208ENST00000543175 ANKLE2Q86XL3 938 aa36.73■■■■□ 3.47
PTRH1-208ENST00000543175 FAM50AQ14320 339 aaKnown RBP36.72■■■■□ 3.47
PTRH1-208ENST00000543175 KANK1Q14678 1352 aa36.72■■■■□ 3.47
PTRH1-208ENST00000543175 VWDEQ8N2E2 1590 aa36.71■■■■□ 3.47
PTRH1-208ENST00000543175 MED14O60244 1454 aa36.7■■■■□ 3.47
PTRH1-208ENST00000543175 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.7■■■■□ 3.47
PTRH1-208ENST00000543175 LMTK2Q8IWU2 1503 aa36.69■■■■□ 3.46
PTRH1-208ENST00000543175 IQGAP1P46940 1657 aa36.68■■■■□ 3.46
PTRH1-208ENST00000543175 NPHP4O75161 1426 aaPredicted RBP36.66■■■■□ 3.46
PTRH1-208ENST00000543175 CPS1P31327 1500 aa36.62■■■■□ 3.45
PTRH1-208ENST00000543175 PIK3C2BO00750 1634 aa36.61■■■■□ 3.45
PTRH1-208ENST00000543175 EFCAB6Q5THR3 1501 aa36.59■■■■□ 3.45
PTRH1-208ENST00000543175 ANKRD50Q9ULJ7 1429 aa36.57■■■■□ 3.44
PTRH1-208ENST00000543175 KDM5AP29375 1690 aaKnown RBP36.56■■■■□ 3.44
PTRH1-208ENST00000543175 SLIT1O75093 1534 aa36.55■■■■□ 3.44
PTRH1-208ENST00000543175 ARHGAP23Q9P227 1491 aa36.54■■■■□ 3.44
PTRH1-208ENST00000543175 SYNMO15061 1565 aa36.53■■■■□ 3.44
PTRH1-208ENST00000543175 SCAF11Q99590 1463 aaKnown RBP36.52■■■■□ 3.44
PTRH1-208ENST00000543175 UBAP1LF5GYI3 381 aa36.5■■■■□ 3.43
PTRH1-208ENST00000543175 UNC13BO14795 1591 aa36.49■■■■□ 3.43
PTRH1-208ENST00000543175 STRCP1A6NGW2 1772 aa36.49■■■■□ 3.43
PTRH1-208ENST00000543175 TET3O43151 1660 aa36.48■■■■□ 3.43
PTRH1-208ENST00000543175 GCC2Q8IWJ2 1684 aa36.46■■■■□ 3.43
PTRH1-208ENST00000543175 NOS1P29475 1434 aa36.46■■■■□ 3.43
PTRH1-208ENST00000543175 RPRD2Q5VT52 1461 aaKnown RBP36.43■■■■□ 3.42
PTRH1-208ENST00000543175 ROCK1Q13464 1354 aa36.43■■■■□ 3.42
PTRH1-208ENST00000543175 LTKP29376 864 aa36.4■■■■□ 3.42
PTRH1-208ENST00000543175 TXNDC2Q86VQ3 553 aa36.4■■■■□ 3.42
PTRH1-208ENST00000543175 TMEM2Q9UHN6 1383 aa36.4■■■■□ 3.42
PTRH1-208ENST00000543175 ADGRB3O60242 1522 aa36.39■■■■□ 3.42
PTRH1-208ENST00000543175 STAG3Q9UJ98 1225 aa36.39■■■■□ 3.42
PTRH1-208ENST00000543175 IDI1Q13907 227 aa36.38■■■■□ 3.41
PTRH1-208ENST00000543175 PPARGC1BQ86YN6 1023 aaKnown RBP36.37■■■■□ 3.41
PTRH1-208ENST00000543175 EID1Q9Y6B2 187 aa36.36■■■■□ 3.41
PTRH1-208ENST00000543175 IQGAP3Q86VI3 1631 aa36.34■■■■□ 3.41
PTRH1-208ENST00000543175 E9PCH4 1651 aa36.32■■■■□ 3.41
PTRH1-208ENST00000543175 MYO5BQ9ULV0 1848 aa36.32■■■■□ 3.41
PTRH1-208ENST00000543175 LRRC7Q96NW7 1537 aa36.32■■■■□ 3.4
PTRH1-208ENST00000543175 SLC52A1Q9NWF4 448 aa36.3■■■■□ 3.4
PTRH1-208ENST00000543175 TOM1O60784 492 aa36.29■■■■□ 3.4
PTRH1-208ENST00000543175 ITGAEP38570 1179 aa36.28■■■■□ 3.4
PTRH1-208ENST00000543175 ALKQ9UM73 1620 aa36.26■■■■□ 3.4
PTRH1-208ENST00000543175 DISP3Q9P2K9 1392 aa36.25■■■■□ 3.39
PTRH1-208ENST00000543175 XIRP1Q702N8 1843 aaKnown RBP36.24■■■■□ 3.39
PTRH1-208ENST00000543175 TMEM131LA2VDJ0 1609 aa36.23■■■■□ 3.39
PTRH1-208ENST00000543175 SCAF1Q9H7N4 1312 aaKnown RBP36.22■■■■□ 3.39
PTRH1-208ENST00000543175 PIP4K2BP78356 416 aa36.21■■■■□ 3.39
PTRH1-208ENST00000543175 RRBP1Q9P2E9 1410 aaKnown RBP36.18■■■■□ 3.38
PTRH1-208ENST00000543175 NUP155O75694 1391 aa36.15■■■■□ 3.38
PTRH1-208ENST00000543175 ZFYVE9O95405 1425 aa36.14■■■■□ 3.38
PTRH1-208ENST00000543175 HSPA1LP34931 641 aa36.1■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms