RNA–Protein interactions for RNA: ENST00000541029.1

ATN1-204, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-204ENST00000541029 FGD6Q6ZV73 1430 aa31.4■■■□□ 2.62
ATN1-204ENST00000541029 DNMT1P26358 1616 aaKnown RBP31.39■■■□□ 2.62
ATN1-204ENST00000541029 PPP6R1Q9UPN7 881 aa31.39■■■□□ 2.62
ATN1-204ENST00000541029 SHANK2Q9UPX8 1470 aa31.37■■■□□ 2.61
ATN1-204ENST00000541029 CEP170BQ9Y4F5 1589 aaPredicted RBP31.36■■■□□ 2.61
ATN1-204ENST00000541029 TCOF1Q13428 1488 aaKnown RBP31.36■■■□□ 2.61
ATN1-204ENST00000541029 ZC3H13Q5T200 1668 aaKnown RBP31.34■■■□□ 2.61
ATN1-204ENST00000541029 CAMSAP1Q5T5Y3 1602 aa31.34■■■□□ 2.61
ATN1-204ENST00000541029 ABCC5O15440 1437 aa31.32■■■□□ 2.61
ATN1-204ENST00000541029 MROH1Q8NDA8 1641 aa31.32■■■□□ 2.6
ATN1-204ENST00000541029 NCOA1Q15788 1441 aa31.32■■■□□ 2.6
ATN1-204ENST00000541029 DUOX2Q9NRD8 1548 aa31.31■■■□□ 2.6
ATN1-204ENST00000541029 CEP152O94986 1710 aa31.3■■■□□ 2.6
ATN1-204ENST00000541029 PZPP20742 1482 aa31.3■■■□□ 2.6
ATN1-204ENST00000541029 DAPK1P53355 1430 aa31.3■■■□□ 2.6
ATN1-204ENST00000541029 ABCC3O15438 1527 aa31.27■■■□□ 2.6
ATN1-204ENST00000541029 WASHC2CQ9Y4E1 1318 aa31.24■■■□□ 2.59
ATN1-204ENST00000541029 KIF15Q9NS87 1388 aa31.24■■■□□ 2.59
ATN1-204ENST00000541029 PTPRTO14522 1441 aa31.23■■■□□ 2.59
ATN1-204ENST00000541029 DMRT2Q9Y5R5 561 aa31.22■■■□□ 2.59
ATN1-204ENST00000541029 A2ML1A8K2U0 1454 aa31.21■■■□□ 2.59
ATN1-204ENST00000541029 FBXO41Q8TF61 875 aa31.21■■■□□ 2.59
ATN1-204ENST00000541029 PRDM15P57071 1507 aaPredicted RBP31.19■■■□□ 2.58
ATN1-204ENST00000541029 TNRQ92752 1358 aa31.19■■■□□ 2.58
ATN1-204ENST00000541029 ERBINQ96RT1 1412 aa31.19■■■□□ 2.58
ATN1-204ENST00000541029 PLA2R1Q13018 1463 aa31.19■■■□□ 2.58
ATN1-204ENST00000541029 DEPDC5O75140 1603 aa31.18■■■□□ 2.58
ATN1-204ENST00000541029 FBXO31Q5XUX0 539 aaPredicted RBP31.18■■■□□ 2.58
ATN1-204ENST00000541029 CFAP65Q6ZU64 1925 aaKnown RBP31.16■■■□□ 2.58
ATN1-204ENST00000541029 POLR1AO95602 1720 aaPredicted RBP31.15■■■□□ 2.58
ATN1-204ENST00000541029 RRP7BPQ9NSQ0 103 aa31.14■■■□□ 2.58
ATN1-204ENST00000541029 SPATA31D1Q6ZQQ2 1576 aa31.13■■■□□ 2.57
ATN1-204ENST00000541029 CERKQ8TCT0 537 aa31.12■■■□□ 2.57
ATN1-204ENST00000541029 NCKAP5LQ9HCH0 1330 aa31.1■■■□□ 2.57
ATN1-204ENST00000541029 ADGRL2O95490 1459 aa31.09■■■□□ 2.57
ATN1-204ENST00000541029 ANKRD30AQ9BXX3 1397 aa31.09■■■□□ 2.57
ATN1-204ENST00000541029 CHIC2Q9UKJ5 165 aa31.09■■■□□ 2.57
ATN1-204ENST00000541029 FAM50AQ14320 339 aaKnown RBP31.08■■■□□ 2.57
ATN1-204ENST00000541029 ERVK-7P63135 1459 aa31.08■■■□□ 2.57
ATN1-204ENST00000541029 NLRP1Q9C000 1473 aa31.08■■■□□ 2.57
ATN1-204ENST00000541029 LTBP4Q8N2S1 1624 aa31.07■■■□□ 2.56
ATN1-204ENST00000541029 NEURL4Q96JN8 1562 aa31.04■■■□□ 2.56
ATN1-204ENST00000541029 UGGT1Q9NYU2 1555 aa31.04■■■□□ 2.56
ATN1-204ENST00000541029 PKD2Q13563 968 aa31.02■■■□□ 2.56
ATN1-204ENST00000541029 VWDEQ8N2E2 1590 aa31■■■□□ 2.55
ATN1-204ENST00000541029 UBR1Q8IWV7 1749 aa30.98■■■□□ 2.55
ATN1-204ENST00000541029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.97■■■□□ 2.551e-6■□□□□ 9.6
ATN1-204ENST00000541029 ARHGAP31Q2M1Z3 1444 aa30.97■■■□□ 2.55
ATN1-204ENST00000541029 LMTK2Q8IWU2 1503 aa30.95■■■□□ 2.55
ATN1-204ENST00000541029 KANK1Q14678 1352 aa30.94■■■□□ 2.54
ATN1-204ENST00000541029 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.94■■■□□ 2.54
ATN1-204ENST00000541029 PPARGC1BQ86YN6 1023 aaKnown RBP30.93■■■□□ 2.54
ATN1-204ENST00000541029 EFCAB6Q5THR3 1501 aa30.91■■■□□ 2.54
ATN1-204ENST00000541029 ZNF335Q9H4Z2 1342 aaPredicted RBP30.91■■■□□ 2.54
ATN1-204ENST00000541029 ANKRD50Q9ULJ7 1429 aa30.9■■■□□ 2.54
ATN1-204ENST00000541029 PIK3C2BO00750 1634 aa30.88■■■□□ 2.53
ATN1-204ENST00000541029 IQGAP1P46940 1657 aa30.88■■■□□ 2.53
ATN1-204ENST00000541029 IQSEC2Q5JU85 1478 aa30.88■■■□□ 2.53
ATN1-204ENST00000541029 THEMISQ8N1K5 641 aaPredicted RBP30.87■■■□□ 2.53
ATN1-204ENST00000541029 UNC13BO14795 1591 aa30.87■■■□□ 2.53
ATN1-204ENST00000541029 SYNMO15061 1565 aa30.84■■■□□ 2.53
ATN1-204ENST00000541029 TET3O43151 1660 aa30.83■■■□□ 2.53
ATN1-204ENST00000541029 MED14O60244 1454 aa30.82■■■□□ 2.53
ATN1-204ENST00000541029 ANKLE2Q86XL3 938 aa30.82■■■□□ 2.52
ATN1-204ENST00000541029 GCC2Q8IWJ2 1684 aa30.81■■■□□ 2.52
ATN1-204ENST00000541029 NPHP4O75161 1426 aaPredicted RBP30.81■■■□□ 2.52
ATN1-204ENST00000541029 ROCK1Q13464 1354 aa30.8■■■□□ 2.52
ATN1-204ENST00000541029 KDM5AP29375 1690 aaKnown RBP30.79■■■□□ 2.52
ATN1-204ENST00000541029 SLIT1O75093 1534 aa30.76■■■□□ 2.51
ATN1-204ENST00000541029 ARHGAP23Q9P227 1491 aa30.75■■■□□ 2.51
ATN1-204ENST00000541029 NOS1P29475 1434 aa30.74■■■□□ 2.51
ATN1-204ENST00000541029 ITGAEP38570 1179 aa30.74■■■□□ 2.51
ATN1-204ENST00000541029 IQGAP3Q86VI3 1631 aa30.73■■■□□ 2.51
ATN1-204ENST00000541029 SCAF11Q99590 1463 aaKnown RBP30.73■■■□□ 2.51
ATN1-204ENST00000541029 CPS1P31327 1500 aa30.72■■■□□ 2.51
ATN1-204ENST00000541029 STRCP1A6NGW2 1772 aa30.71■■■□□ 2.51
ATN1-204ENST00000541029 RPRD2Q5VT52 1461 aaKnown RBP30.71■■■□□ 2.51
ATN1-204ENST00000541029 ADGRB3O60242 1522 aa30.71■■■□□ 2.51
ATN1-204ENST00000541029 E9PCH4 1651 aa30.71■■■□□ 2.51
ATN1-204ENST00000541029 RRBP1Q9P2E9 1410 aaKnown RBP30.7■■■□□ 2.5
ATN1-204ENST00000541029 MYO5BQ9ULV0 1848 aa30.7■■■□□ 2.5
ATN1-204ENST00000541029 IDI1Q13907 227 aa30.63■■■□□ 2.49
ATN1-204ENST00000541029 TMEM2Q9UHN6 1383 aa30.63■■■□□ 2.49
ATN1-204ENST00000541029 LTKP29376 864 aa30.61■■■□□ 2.49
ATN1-204ENST00000541029 STAG3Q9UJ98 1225 aa30.61■■■□□ 2.49
ATN1-204ENST00000541029 TXNDC2Q86VQ3 553 aa30.59■■■□□ 2.49
ATN1-204ENST00000541029 TMEM131LA2VDJ0 1609 aa30.56■■■□□ 2.48
ATN1-204ENST00000541029 UBAP1LF5GYI3 381 aa30.56■■■□□ 2.48
ATN1-204ENST00000541029 EID1Q9Y6B2 187 aa30.55■■■□□ 2.48
ATN1-204ENST00000541029 NUP155O75694 1391 aa30.54■■■□□ 2.48
ATN1-204ENST00000541029 SLC52A1Q9NWF4 448 aa30.54■■■□□ 2.48
ATN1-204ENST00000541029 SPHKAPQ2M3C7 1700 aa30.51■■■□□ 2.47
ATN1-204ENST00000541029 LRRC7Q96NW7 1537 aa30.51■■■□□ 2.47
ATN1-204ENST00000541029 XIRP1Q702N8 1843 aaKnown RBP30.5■■■□□ 2.47
ATN1-204ENST00000541029 ALKQ9UM73 1620 aa30.47■■■□□ 2.47
ATN1-204ENST00000541029 NAIPQ13075 1403 aa30.47■■■□□ 2.47
ATN1-204ENST00000541029 ZFYVE9O95405 1425 aa30.46■■■□□ 2.47
ATN1-204ENST00000541029 RIMS2Q9UQ26 1411 aa30.41■■■□□ 2.46
ATN1-204ENST00000541029 HFM1A2PYH4 1435 aa30.39■■■□□ 2.45
ATN1-204ENST00000541029 NWD1Q149M9 1564 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms