RNA–Protein interactions for RNA: ENST00000541029.1

ATN1-204, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-204ENST00000541029 NISCHQ9Y2I1 1504 aa49.78■■■■■ 5.56
ATN1-204ENST00000541029 CCDC180Q9P1Z9 1646 aa44.6■■■■■ 4.73
ATN1-204ENST00000541029 ABCC9O60706 1549 aa44.04■■■■■ 4.64
ATN1-204ENST00000541029 RB1CC1Q8TDY2 1594 aa42.15■■■■■ 4.34
ATN1-204ENST00000541029 NACADO15069 1562 aa41.94■■■■■ 4.3
ATN1-204ENST00000541029 DCAF8L2P0C7V8 631 aa41.66■■■■■ 4.26
ATN1-204ENST00000541029 MYO15BQ96JP2 1530 aa41.49■■■■■ 4.23
ATN1-204ENST00000541029 ZCCHC6Q5VYS8 1495 aaKnown RBP41.4■■■■■ 4.22
ATN1-204ENST00000541029 UNC13AQ9UPW8 1703 aa41.38■■■■■ 4.22
ATN1-204ENST00000541029 DCAF1Q9Y4B6 1507 aa41.14■■■■■ 4.18
ATN1-204ENST00000541029 PABPN1Q86U42 306 aaKnown RBP eCLIP40.97■■■■■ 4.15
ATN1-204ENST00000541029 BICRAQ9NZM4 1560 aa40.94■■■■■ 4.14
ATN1-204ENST00000541029 DNAJC5BQ9UF47 199 aa40.79■■■■■ 4.12
ATN1-204ENST00000541029 SCRIBQ14160 1630 aa40.65■■■■■ 4.1
ATN1-204ENST00000541029 SHROOM4Q9ULL8 1493 aa40.38■■■■■ 4.05
ATN1-204ENST00000541029 EIF4G1Q04637 1599 aaKnown RBP39.89■■■■□ 3.98
ATN1-204ENST00000541029 CC2D2AQ9P2K1 1620 aa39.87■■■■□ 3.97
ATN1-204ENST00000541029 CECR2Q9BXF3 1484 aa39.61■■■■□ 3.93
ATN1-204ENST00000541029 SMARCA4P51532 1647 aa38.81■■■■□ 3.8
ATN1-204ENST00000541029 NCAPD3P42695 1498 aa38.65■■■■□ 3.78
ATN1-204ENST00000541029 ATAD2BQ9ULI0 1458 aa38.64■■■■□ 3.78
ATN1-204ENST00000541029 BAZ1AQ9NRL2 1556 aaPredicted RBP38.63■■■■□ 3.77
ATN1-204ENST00000541029 SMARCA2P51531 1590 aa38.59■■■■□ 3.77
ATN1-204ENST00000541029 HMGXB3Q12766 1538 aa38.51■■■■□ 3.76
ATN1-204ENST00000541029 PEG3Q9GZU2 1588 aa38.4■■■■□ 3.74
ATN1-204ENST00000541029 MROH2BQ7Z745 1585 aa38.38■■■■□ 3.73
ATN1-204ENST00000541029 BAZ1BQ9UIG0 1483 aaKnown RBP38.32■■■■□ 3.72
ATN1-204ENST00000541029 WIZO95785 1651 aa38.01■■■■□ 3.68
ATN1-204ENST00000541029 NESP48681 1621 aa37.98■■■■□ 3.67
ATN1-204ENST00000541029 ERCC6Q03468 1493 aa37.97■■■■□ 3.67
ATN1-204ENST00000541029 LAMC3Q9Y6N6 1575 aa37.8■■■■□ 3.64
ATN1-204ENST00000541029 CUX2O14529 1486 aa37.75■■■■□ 3.63
ATN1-204ENST00000541029 RSF1Q96T23 1441 aaPredicted RBP37.69■■■■□ 3.62
ATN1-204ENST00000541029 KIF21AQ7Z4S6 1674 aa37.64■■■■□ 3.62
ATN1-204ENST00000541029 THOC2Q8NI27 1593 aaKnown RBP37.6■■■■□ 3.61
ATN1-204ENST00000541029 TOP2AP11388 1531 aaKnown RBP37.53■■■■□ 3.6
ATN1-204ENST00000541029 CADPSQ9ULU8 1353 aa37.48■■■■□ 3.59
ATN1-204ENST00000541029 PDS5BQ9NTI5 1447 aa37.46■■■■□ 3.59
ATN1-204ENST00000541029 CFTRP13569 1480 aa37.2■■■■□ 3.54
ATN1-204ENST00000541029 MRC2Q9UBG0 1479 aa37.2■■■■□ 3.54
ATN1-204ENST00000541029 CEP164Q9UPV0 1460 aa37.14■■■■□ 3.54
ATN1-204ENST00000541029 WDR62O43379 1518 aa37.13■■■■□ 3.53
ATN1-204ENST00000541029 FANCD2Q9BXW9 1451 aa37.12■■■■□ 3.53
ATN1-204ENST00000541029 PRDM2Q13029 1718 aa37.11■■■■□ 3.53
ATN1-204ENST00000541029 DNAJC5Q9H3Z4 198 aa37.08■■■■□ 3.53
ATN1-204ENST00000541029 CCDC88BA6NC98 1476 aa37.02■■■■□ 3.52
ATN1-204ENST00000541029 URB2Q14146 1524 aaKnown RBP36.82■■■■□ 3.48
ATN1-204ENST00000541029 TOPBP1Q92547 1522 aa36.49■■■■□ 3.43
ATN1-204ENST00000541029 DNMBPQ6XZF7 1577 aa36.44■■■■□ 3.42
ATN1-204ENST00000541029 ABCC8Q09428 1581 aa36.38■■■■□ 3.41
ATN1-204ENST00000541029 IFT140Q96RY7 1462 aa36.35■■■■□ 3.41
ATN1-204ENST00000541029 SUPT5HO00267 1087 aaKnown RBP36.29■■■■□ 3.4
ATN1-204ENST00000541029 ZNF608Q9ULD9 1512 aaPredicted RBP36.28■■■■□ 3.4
ATN1-204ENST00000541029 EIF4G3O43432 1585 aaKnown RBP36.2■■■■□ 3.39
ATN1-204ENST00000541029 TARBP1Q13395 1621 aaKnown RBP36.19■■■■□ 3.38
ATN1-204ENST00000541029 POLA1P09884 1462 aaPredicted RBP36.15■■■■□ 3.38
ATN1-204ENST00000541029 CUX1P39880 1505 aa36.05■■■■□ 3.36
ATN1-204ENST00000541029 FGD5Q6ZNL6 1462 aa35.99■■■■□ 3.35
ATN1-204ENST00000541029 RAD54L2Q9Y4B4 1467 aa35.99■■■■□ 3.35
ATN1-204ENST00000541029 OSCARQ8IYS5 282 aa35.96■■■■□ 3.35
ATN1-204ENST00000541029 AQRO60306 1485 aaKnown RBP eCLIP35.96■■■■□ 3.359e-9■■■■■ 40.3
ATN1-204ENST00000541029 SOGA1O94964 1423 aa35.91■■■■□ 3.34
ATN1-204ENST00000541029 CHD1O14646 1710 aa35.9■■■■□ 3.34
ATN1-204ENST00000541029 WDR97A6NE52 1622 aa35.86■■■■□ 3.33
ATN1-204ENST00000541029 TDRD9Q8NDG6 1382 aaKnown RBP35.78■■■■□ 3.32
ATN1-204ENST00000541029 TRIM41Q8WV44 630 aa35.71■■■■□ 3.31
ATN1-204ENST00000541029 RIMBP3CA6NJZ7 1639 aa35.68■■■■□ 3.3
ATN1-204ENST00000541029 RIMBP3BA6NNM3 1639 aa35.68■■■■□ 3.3
ATN1-204ENST00000541029 RIMBP3Q9UFD9 1639 aa35.68■■■■□ 3.3
ATN1-204ENST00000541029 SNAPC4Q5SXM2 1469 aa35.67■■■■□ 3.3
ATN1-204ENST00000541029 PBRM1Q86U86 1689 aa35.67■■■■□ 3.3
ATN1-204ENST00000541029 BIVM-ERCC5R4GMW8 1640 aa35.66■■■■□ 3.3
ATN1-204ENST00000541029 SYNJ1O43426 1573 aa35.62■■■■□ 3.29
ATN1-204ENST00000541029 TOP2BQ02880 1626 aa35.61■■■■□ 3.29
ATN1-204ENST00000541029 ABCA5Q8WWZ7 1642 aa35.6■■■■□ 3.29
ATN1-204ENST00000541029 GRIN2BQ13224 1484 aa35.59■■■■□ 3.29
ATN1-204ENST00000541029 ABCA10Q8WWZ4 1543 aa35.58■■■■□ 3.29
ATN1-204ENST00000541029 MAGI1Q96QZ7 1491 aaPredicted RBP35.57■■■■□ 3.28
ATN1-204ENST00000541029 FBLN2P98095 1184 aa35.56■■■■□ 3.28
ATN1-204ENST00000541029 ARHGEF11O15085 1522 aa35.56■■■■□ 3.28
ATN1-204ENST00000541029 WRNQ14191 1432 aaPredicted RBP eCLIP35.56■■■■□ 3.285e-6■■■■■ 29.2
ATN1-204ENST00000541029 GAPVD1Q14C86 1478 aa35.53■■■■□ 3.28
ATN1-204ENST00000541029 SYNJ2O15056 1496 aa35.43■■■■□ 3.26
ATN1-204ENST00000541029 CLASP1Q7Z460 1538 aa35.4■■■■□ 3.26
ATN1-204ENST00000541029 CHMP7Q8WUX9 453 aaPredicted RBP35.36■■■■□ 3.25
ATN1-204ENST00000541029 ADAMTS12P58397 1594 aa35.3■■■■□ 3.24
ATN1-204ENST00000541029 ARAP1Q96P48 1450 aa35.24■■■■□ 3.23
ATN1-204ENST00000541029 GRIN2AQ12879 1464 aa35.17■■■■□ 3.22
ATN1-204ENST00000541029 ERICH3Q5RHP9 1530 aa35.16■■■■□ 3.22
ATN1-204ENST00000541029 CYB5RLQ6IPT4 315 aa35.12■■■■□ 3.21
ATN1-204ENST00000541029 CEP170Q5SW79 1584 aa35.08■■■■□ 3.21
ATN1-204ENST00000541029 FHAD1B1AJZ9 1412 aa35.07■■■■□ 3.21
ATN1-204ENST00000541029 NUP160Q12769 1436 aa35.01■■■■□ 3.2
ATN1-204ENST00000541029 SHROOM2Q13796 1616 aa34.9■■■■□ 3.18
ATN1-204ENST00000541029 ERCC6L2Q5T890 1561 aa34.89■■■■□ 3.18
ATN1-204ENST00000541029 KIF27Q86VH2 1401 aa34.82■■■■□ 3.17
ATN1-204ENST00000541029 CUL7Q14999 1698 aa34.82■■■■□ 3.16
ATN1-204ENST00000541029 RUSC2Q8N2Y8 1516 aa34.81■■■■□ 3.16
ATN1-204ENST00000541029 IGF1RP08069 1367 aa34.72■■■■□ 3.15
ATN1-204ENST00000541029 PRG4Q92954 1404 aaPredicted RBP34.6■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms