RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 NCOA2Q15596 1464 aa14.15□□□□□ -0.14
SMAD3-203ENST00000537194 FAM135AQ9P2D6 1515 aa14.15□□□□□ -0.14
SMAD3-203ENST00000537194 CAMSAP2Q08AD1 1489 aa14.14□□□□□ -0.15
SMAD3-203ENST00000537194 TNRQ92752 1358 aa14.14□□□□□ -0.15
SMAD3-203ENST00000537194 TCOF1Q13428 1488 aaKnown RBP14.12□□□□□ -0.15
SMAD3-203ENST00000537194 KDM5DQ9BY66 1539 aa14.12□□□□□ -0.15
SMAD3-203ENST00000537194 ANKLE2Q86XL3 938 aa14.12□□□□□ -0.15
SMAD3-203ENST00000537194 THEMISQ8N1K5 641 aaPredicted RBP14.12□□□□□ -0.15
SMAD3-203ENST00000537194 SPATA31D1Q6ZQQ2 1576 aa14.11□□□□□ -0.15
SMAD3-203ENST00000537194 DNMT1P26358 1616 aaKnown RBP14.1□□□□□ -0.15
SMAD3-203ENST00000537194 PZPP20742 1482 aa14.1□□□□□ -0.15
SMAD3-203ENST00000537194 SCAF1Q9H7N4 1312 aaKnown RBP14.1□□□□□ -0.15
SMAD3-203ENST00000537194 ARHGEF5Q12774 1597 aa14.09□□□□□ -0.15
SMAD3-203ENST00000537194 TOM1O60784 492 aa14.09□□□□□ -0.15
SMAD3-203ENST00000537194 FBXO31Q5XUX0 539 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-203ENST00000537194 POLR1AO95602 1720 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-203ENST00000537194 SOCS7O14512 581 aa14.08□□□□□ -0.16
SMAD3-203ENST00000537194 APLP2Q06481 763 aa14.08□□□□□ -0.16
SMAD3-203ENST00000537194 NLRP1Q9C000 1473 aa14.07□□□□□ -0.16
SMAD3-203ENST00000537194 VPS8Q8N3P4 1428 aa14.07□□□□□ -0.16
SMAD3-203ENST00000537194 MIA2Q96PC5 1412 aa14.07□□□□□ -0.16
SMAD3-203ENST00000537194 ILDR2Q71H61 639 aa14.06□□□□□ -0.16
SMAD3-203ENST00000537194 LRRC9Q6ZRR7 1453 aa14.06□□□□□ -0.16
SMAD3-203ENST00000537194 CPS1P31327 1500 aa14.05□□□□□ -0.16
SMAD3-203ENST00000537194 UGGT1Q9NYU2 1555 aa14.05□□□□□ -0.16
SMAD3-203ENST00000537194 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.04□□□□□ -0.16
SMAD3-203ENST00000537194 CFAP65Q6ZU64 1925 aaKnown RBP14.03□□□□□ -0.16
SMAD3-203ENST00000537194 PIP4K2BP78356 416 aa14.03□□□□□ -0.16
SMAD3-203ENST00000537194 SHANK2Q9UPX8 1470 aa14.03□□□□□ -0.16
SMAD3-203ENST00000537194 ZC3H13Q5T200 1668 aaKnown RBP14.03□□□□□ -0.16
SMAD3-203ENST00000537194 NPHP4O75161 1426 aaPredicted RBP14.01□□□□□ -0.17
SMAD3-203ENST00000537194 MYOM3Q5VTT5 1437 aa14.01□□□□□ -0.17
SMAD3-203ENST00000537194 RNF17Q9BXT8 1623 aaKnown RBP14.01□□□□□ -0.17
SMAD3-203ENST00000537194 EIF2AK4Q9P2K8 1649 aaKnown RBP14.01□□□□□ -0.17
SMAD3-203ENST00000537194 MAST1Q9Y2H9 1570 aa14□□□□□ -0.17
SMAD3-203ENST00000537194 MAP3K1Q13233 1512 aa14□□□□□ -0.17
SMAD3-203ENST00000537194 LOC105371045A0A1W2PR82 267 aa14□□□□□ -0.17
SMAD3-203ENST00000537194 DEPDC5O75140 1603 aa14□□□□□ -0.17
SMAD3-203ENST00000537194 NEURL4Q96JN8 1562 aa13.99□□□□□ -0.17
SMAD3-203ENST00000537194 ABCC3O15438 1527 aa13.98□□□□□ -0.17
SMAD3-203ENST00000537194 DUOX2Q9NRD8 1548 aa13.97□□□□□ -0.17
SMAD3-203ENST00000537194 STAG3Q9UJ98 1225 aa13.97□□□□□ -0.17
SMAD3-203ENST00000537194 MED14O60244 1454 aa13.97□□□□□ -0.17
SMAD3-203ENST00000537194 IQGAP1P46940 1657 aa13.97□□□□□ -0.17
SMAD3-203ENST00000537194 KANK1Q14678 1352 aa13.96□□□□□ -0.17
SMAD3-203ENST00000537194 HSPA1LP34931 641 aa13.96□□□□□ -0.17
SMAD3-203ENST00000537194 KANK4Q5T7N3 995 aaPredicted RBP13.96□□□□□ -0.17
SMAD3-203ENST00000537194 EID1Q9Y6B2 187 aa13.96□□□□□ -0.17
SMAD3-203ENST00000537194 ERVK-7P63135 1459 aa13.95□□□□□ -0.18
SMAD3-203ENST00000537194 CEP152O94986 1710 aa13.95□□□□□ -0.18
SMAD3-203ENST00000537194 KIF15Q9NS87 1388 aa13.95□□□□□ -0.18
SMAD3-203ENST00000537194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.94□□□□□ -0.182e-7■■□□□ 11.6
SMAD3-203ENST00000537194 PHF23Q9BUL5 403 aaPredicted RBP13.94□□□□□ -0.18
SMAD3-203ENST00000537194 RRP7BPQ9NSQ0 103 aa13.94□□□□□ -0.18
SMAD3-203ENST00000537194 VWDEQ8N2E2 1590 aa13.93□□□□□ -0.18
SMAD3-203ENST00000537194 TXNDC2Q86VQ3 553 aa13.93□□□□□ -0.18
SMAD3-203ENST00000537194 ERBINQ96RT1 1412 aa13.92□□□□□ -0.18
SMAD3-203ENST00000537194 SCAF11Q99590 1463 aaKnown RBP13.91□□□□□ -0.18
SMAD3-203ENST00000537194 PTPN23Q9H3S7 1636 aa13.9□□□□□ -0.18
SMAD3-203ENST00000537194 ANKRD30AQ9BXX3 1397 aa13.9□□□□□ -0.18
SMAD3-203ENST00000537194 UBR1Q8IWV7 1749 aa13.9□□□□□ -0.18
SMAD3-203ENST00000537194 ARHGAP31Q2M1Z3 1444 aa13.9□□□□□ -0.19
SMAD3-203ENST00000537194 CROCC2H7BZ55 1655 aa13.89□□□□□ -0.19
SMAD3-203ENST00000537194 SYNMO15061 1565 aa13.89□□□□□ -0.19
SMAD3-203ENST00000537194 MROH1Q8NDA8 1641 aa13.88□□□□□ -0.19
SMAD3-203ENST00000537194 PRDM15P57071 1507 aaPredicted RBP13.88□□□□□ -0.19
SMAD3-203ENST00000537194 ABCC5O15440 1437 aa13.88□□□□□ -0.19
SMAD3-203ENST00000537194 MED1Q15648 1581 aaPredicted RBP13.88□□□□□ -0.19
SMAD3-203ENST00000537194 SENP3Q9H4L4 574 aaPredicted RBP13.87□□□□□ -0.19
SMAD3-203ENST00000537194 CHIC2Q9UKJ5 165 aa13.87□□□□□ -0.19
SMAD3-203ENST00000537194 DAPK1P53355 1430 aa13.87□□□□□ -0.19
SMAD3-203ENST00000537194 LRRC7Q96NW7 1537 aa13.86□□□□□ -0.19
SMAD3-203ENST00000537194 SLIT1O75093 1534 aa13.85□□□□□ -0.19
SMAD3-203ENST00000537194 FGD6Q6ZV73 1430 aa13.85□□□□□ -0.19
SMAD3-203ENST00000537194 BCANQ96GW7 911 aa13.85□□□□□ -0.19
SMAD3-203ENST00000537194 LTKP29376 864 aa13.84□□□□□ -0.19
SMAD3-203ENST00000537194 STRCP1A6NGW2 1772 aa13.83□□□□□ -0.19
SMAD3-203ENST00000537194 ARHGAP23Q9P227 1491 aa13.83□□□□□ -0.2
SMAD3-203ENST00000537194 HDGFP51858 240 aaKnown RBP13.83□□□□□ -0.2
SMAD3-203ENST00000537194 FAM50AQ14320 339 aaKnown RBP13.83□□□□□ -0.2
SMAD3-203ENST00000537194 TMEM2Q9UHN6 1383 aa13.83□□□□□ -0.2
SMAD3-203ENST00000537194 PIK3C2BO00750 1634 aa13.82□□□□□ -0.2
SMAD3-203ENST00000537194 EFCAB6Q5THR3 1501 aa13.81□□□□□ -0.2
SMAD3-203ENST00000537194 SLC52A1Q9NWF4 448 aa13.81□□□□□ -0.2
SMAD3-203ENST00000537194 KDM5AP29375 1690 aaKnown RBP13.81□□□□□ -0.2
SMAD3-203ENST00000537194 IDI1Q13907 227 aa13.8□□□□□ -0.2
SMAD3-203ENST00000537194 KCNA6P17658 529 aa13.79□□□□□ -0.2
SMAD3-203ENST00000537194 PROSER2Q86WR7 435 aaPredicted RBP13.79□□□□□ -0.2
SMAD3-203ENST00000537194 LMTK2Q8IWU2 1503 aa13.79□□□□□ -0.2
SMAD3-203ENST00000537194 PPP1R15AO75807 674 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-203ENST00000537194 ALKQ9UM73 1620 aa13.77□□□□□ -0.21
SMAD3-203ENST00000537194 SLC26A8Q96RN1 970 aa13.76□□□□□ -0.21
SMAD3-203ENST00000537194 RPRD2Q5VT52 1461 aaKnown RBP13.75□□□□□ -0.21
SMAD3-203ENST00000537194 ANKRD50Q9ULJ7 1429 aa13.75□□□□□ -0.21
SMAD3-203ENST00000537194 TMEM94Q12767 1356 aa13.75□□□□□ -0.21
SMAD3-203ENST00000537194 ADGRB3O60242 1522 aa13.74□□□□□ -0.21
SMAD3-203ENST00000537194 ADGRL2O95490 1459 aa13.74□□□□□ -0.21
SMAD3-203ENST00000537194 NOS1P29475 1434 aa13.74□□□□□ -0.21
SMAD3-203ENST00000537194 FAM135BQ49AJ0 1406 aa13.74□□□□□ -0.21
SMAD3-203ENST00000537194 XIRP1Q702N8 1843 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms