RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 CROCC2H7BZ55 1655 aa13.34□□□□□ -0.27
SFSWAP-202ENST00000535202 FAM135AQ9P2D6 1515 aa13.34□□□□□ -0.27
SFSWAP-202ENST00000535202 CEP170BQ9Y4F5 1589 aaPredicted RBP13.33□□□□□ -0.28
SFSWAP-202ENST00000535202 NCOA1Q15788 1441 aa13.33□□□□□ -0.28
SFSWAP-202ENST00000535202 RNF17Q9BXT8 1623 aaKnown RBP13.32□□□□□ -0.28
SFSWAP-202ENST00000535202 EIF2AK4Q9P2K8 1649 aaKnown RBP13.32□□□□□ -0.28
SFSWAP-202ENST00000535202 WASHC2CQ9Y4E1 1318 aa13.32□□□□□ -0.28
SFSWAP-202ENST00000535202 PTPRTO14522 1441 aa13.31□□□□□ -0.28
SFSWAP-202ENST00000535202 FGD6Q6ZV73 1430 aa13.31□□□□□ -0.28
SFSWAP-202ENST00000535202 ABCC5O15440 1437 aa13.3□□□□□ -0.28
SFSWAP-202ENST00000535202 PZPP20742 1482 aa13.3□□□□□ -0.28
SFSWAP-202ENST00000535202 SHANK2Q9UPX8 1470 aa13.3□□□□□ -0.28
SFSWAP-202ENST00000535202 CERKQ8TCT0 537 aa13.3□□□□□ -0.28
SFSWAP-202ENST00000535202 DNMT1P26358 1616 aaKnown RBP13.3□□□□□ -0.28
SFSWAP-202ENST00000535202 TCOF1Q13428 1488 aaKnown RBP13.29□□□□□ -0.28
SFSWAP-202ENST00000535202 DUOX2Q9NRD8 1548 aa13.29□□□□□ -0.28
SFSWAP-202ENST00000535202 ZC3H13Q5T200 1668 aaKnown RBP13.29□□□□□ -0.28
SFSWAP-202ENST00000535202 TNRQ92752 1358 aa13.29□□□□□ -0.28
SFSWAP-202ENST00000535202 DAPK1P53355 1430 aa13.29□□□□□ -0.28
SFSWAP-202ENST00000535202 FBXO31Q5XUX0 539 aaPredicted RBP13.28□□□□□ -0.28
SFSWAP-202ENST00000535202 NCKAP5LQ9HCH0 1330 aa13.28□□□□□ -0.28
SFSWAP-202ENST00000535202 KIF15Q9NS87 1388 aa13.28□□□□□ -0.28
SFSWAP-202ENST00000535202 A2ML1A8K2U0 1454 aa13.28□□□□□ -0.28
SFSWAP-202ENST00000535202 PLA2R1Q13018 1463 aa13.28□□□□□ -0.28
SFSWAP-202ENST00000535202 ABCC3O15438 1527 aa13.28□□□□□ -0.28
SFSWAP-202ENST00000535202 MROH1Q8NDA8 1641 aa13.28□□□□□ -0.28
SFSWAP-202ENST00000535202 CEP152O94986 1710 aa13.27□□□□□ -0.28
SFSWAP-202ENST00000535202 RRP7BPQ9NSQ0 103 aa13.26□□□□□ -0.29
SFSWAP-202ENST00000535202 ERBINQ96RT1 1412 aa13.25□□□□□ -0.29
SFSWAP-202ENST00000535202 PKD2Q13563 968 aa13.24□□□□□ -0.29
SFSWAP-202ENST00000535202 CHIC2Q9UKJ5 165 aa13.24□□□□□ -0.29
SFSWAP-202ENST00000535202 POLR1AO95602 1720 aaPredicted RBP13.23□□□□□ -0.29
SFSWAP-202ENST00000535202 CFAP65Q6ZU64 1925 aaKnown RBP13.23□□□□□ -0.29
SFSWAP-202ENST00000535202 PRDM15P57071 1507 aaPredicted RBP13.23□□□□□ -0.29
SFSWAP-202ENST00000535202 ANKRD30AQ9BXX3 1397 aa13.22□□□□□ -0.29
SFSWAP-202ENST00000535202 LTBP4Q8N2S1 1624 aa13.22□□□□□ -0.29
SFSWAP-202ENST00000535202 FAM50AQ14320 339 aaKnown RBP13.22□□□□□ -0.29
SFSWAP-202ENST00000535202 SPATA31D1Q6ZQQ2 1576 aa13.22□□□□□ -0.29
SFSWAP-202ENST00000535202 NLRP1Q9C000 1473 aa13.22□□□□□ -0.29
SFSWAP-202ENST00000535202 ERVK-7P63135 1459 aa13.21□□□□□ -0.3
SFSWAP-202ENST00000535202 DEPDC5O75140 1603 aa13.21□□□□□ -0.3
SFSWAP-202ENST00000535202 UGGT1Q9NYU2 1555 aa13.2□□□□□ -0.3
SFSWAP-202ENST00000535202 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.2□□□□□ -0.31e-6■□□□□ 10
SFSWAP-202ENST00000535202 NEURL4Q96JN8 1562 aa13.19□□□□□ -0.3
SFSWAP-202ENST00000535202 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.19□□□□□ -0.3
SFSWAP-202ENST00000535202 ZNF335Q9H4Z2 1342 aaPredicted RBP13.18□□□□□ -0.3
SFSWAP-202ENST00000535202 ADGRL2O95490 1459 aa13.18□□□□□ -0.3
SFSWAP-202ENST00000535202 KANK1Q14678 1352 aa13.18□□□□□ -0.3
SFSWAP-202ENST00000535202 THEMISQ8N1K5 641 aaPredicted RBP13.17□□□□□ -0.3
SFSWAP-202ENST00000535202 IQSEC2Q5JU85 1478 aa13.16□□□□□ -0.3
SFSWAP-202ENST00000535202 ARHGAP31Q2M1Z3 1444 aa13.15□□□□□ -0.3
SFSWAP-202ENST00000535202 ANKLE2Q86XL3 938 aa13.15□□□□□ -0.3
SFSWAP-202ENST00000535202 PPARGC1BQ86YN6 1023 aaKnown RBP13.15□□□□□ -0.3
SFSWAP-202ENST00000535202 UBR1Q8IWV7 1749 aa13.15□□□□□ -0.3
SFSWAP-202ENST00000535202 VWDEQ8N2E2 1590 aa13.14□□□□□ -0.31
SFSWAP-202ENST00000535202 LMTK2Q8IWU2 1503 aa13.13□□□□□ -0.31
SFSWAP-202ENST00000535202 NPHP4O75161 1426 aaPredicted RBP13.13□□□□□ -0.31
SFSWAP-202ENST00000535202 ANKRD50Q9ULJ7 1429 aa13.13□□□□□ -0.31
SFSWAP-202ENST00000535202 IQGAP1P46940 1657 aa13.12□□□□□ -0.31
SFSWAP-202ENST00000535202 MED14O60244 1454 aa13.11□□□□□ -0.31
SFSWAP-202ENST00000535202 PIK3C2BO00750 1634 aa13.11□□□□□ -0.31
SFSWAP-202ENST00000535202 EFCAB6Q5THR3 1501 aa13.11□□□□□ -0.31
SFSWAP-202ENST00000535202 ITGAEP38570 1179 aa13.09□□□□□ -0.31
SFSWAP-202ENST00000535202 PELP1Q8IZL8 1130 aaKnown RBP13.09□□□□□ -0.31
SFSWAP-202ENST00000535202 CPS1P31327 1500 aa13.08□□□□□ -0.31
SFSWAP-202ENST00000535202 UNC13BO14795 1591 aa13.08□□□□□ -0.32
SFSWAP-202ENST00000535202 SYNMO15061 1565 aa13.08□□□□□ -0.32
SFSWAP-202ENST00000535202 STAG3Q9UJ98 1225 aa13.08□□□□□ -0.32
SFSWAP-202ENST00000535202 SCAF11Q99590 1463 aaKnown RBP13.08□□□□□ -0.32
SFSWAP-202ENST00000535202 UBAP1LF5GYI3 381 aa13.07□□□□□ -0.32
SFSWAP-202ENST00000535202 TET3O43151 1660 aa13.07□□□□□ -0.32
SFSWAP-202ENST00000535202 SLIT1O75093 1534 aa13.07□□□□□ -0.32
SFSWAP-202ENST00000535202 ROCK1Q13464 1354 aa13.07□□□□□ -0.32
SFSWAP-202ENST00000535202 GCC2Q8IWJ2 1684 aa13.06□□□□□ -0.32
SFSWAP-202ENST00000535202 ARHGAP23Q9P227 1491 aa13.06□□□□□ -0.32
SFSWAP-202ENST00000535202 KDM5AP29375 1690 aaKnown RBP13.05□□□□□ -0.32
SFSWAP-202ENST00000535202 NOS1P29475 1434 aa13.05□□□□□ -0.32
SFSWAP-202ENST00000535202 TXNDC2Q86VQ3 553 aa13.05□□□□□ -0.32
SFSWAP-202ENST00000535202 STRCP1A6NGW2 1772 aa13.04□□□□□ -0.32
SFSWAP-202ENST00000535202 RPRD2Q5VT52 1461 aaKnown RBP13.04□□□□□ -0.32
SFSWAP-202ENST00000535202 ADGRB3O60242 1522 aa13.04□□□□□ -0.32
SFSWAP-202ENST00000535202 LTKP29376 864 aa13.04□□□□□ -0.32
SFSWAP-202ENST00000535202 IDI1Q13907 227 aa13.04□□□□□ -0.32
SFSWAP-202ENST00000535202 EID1Q9Y6B2 187 aa13.04□□□□□ -0.32
SFSWAP-202ENST00000535202 TMEM2Q9UHN6 1383 aa13.04□□□□□ -0.32
SFSWAP-202ENST00000535202 IQGAP3Q86VI3 1631 aa13.02□□□□□ -0.32
SFSWAP-202ENST00000535202 E9PCH4 1651 aa13.02□□□□□ -0.33
SFSWAP-202ENST00000535202 SLC52A1Q9NWF4 448 aa13.01□□□□□ -0.33
SFSWAP-202ENST00000535202 MYO5BQ9ULV0 1848 aa13.01□□□□□ -0.33
SFSWAP-202ENST00000535202 RRBP1Q9P2E9 1410 aaKnown RBP13□□□□□ -0.33
SFSWAP-202ENST00000535202 SCAF1Q9H7N4 1312 aaKnown RBP13□□□□□ -0.33
SFSWAP-202ENST00000535202 LRRC7Q96NW7 1537 aa12.99□□□□□ -0.33
SFSWAP-202ENST00000535202 NUP155O75694 1391 aa12.99□□□□□ -0.33
SFSWAP-202ENST00000535202 TOM1O60784 492 aa12.98□□□□□ -0.33
SFSWAP-202ENST00000535202 PIP4K2BP78356 416 aa12.98□□□□□ -0.33
SFSWAP-202ENST00000535202 TMEM131LA2VDJ0 1609 aa12.97□□□□□ -0.33
SFSWAP-202ENST00000535202 CHGAP10645 457 aaKnown RBP12.96□□□□□ -0.33
SFSWAP-202ENST00000535202 DISP3Q9P2K9 1392 aa12.95□□□□□ -0.34
SFSWAP-202ENST00000535202 BCANQ96GW7 911 aa12.95□□□□□ -0.34
SFSWAP-202ENST00000535202 SENP3Q9H4L4 574 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms