RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 ABCC5O15440 1437 aa36.22■■■■□ 3.39
YIF1A-213ENST00000534374 KDM5DQ9BY66 1539 aa36.19■■■■□ 3.38
YIF1A-213ENST00000534374 TCOF1Q13428 1488 aaKnown RBP36.19■■■■□ 3.38
YIF1A-213ENST00000534374 SHANK2Q9UPX8 1470 aa36.17■■■■□ 3.38
YIF1A-213ENST00000534374 PTPRTO14522 1441 aa36.17■■■■□ 3.38
YIF1A-213ENST00000534374 NCOA1Q15788 1441 aa36.16■■■■□ 3.38
YIF1A-213ENST00000534374 DUOX2Q9NRD8 1548 aa36.14■■■■□ 3.38
YIF1A-213ENST00000534374 FBXO31Q5XUX0 539 aaPredicted RBP36.13■■■■□ 3.37
YIF1A-213ENST00000534374 DAPK1P53355 1430 aa36.13■■■■□ 3.37
YIF1A-213ENST00000534374 PZPP20742 1482 aa36.12■■■■□ 3.37
YIF1A-213ENST00000534374 EIF2AK4Q9P2K8 1649 aaKnown RBP36.12■■■■□ 3.37
YIF1A-213ENST00000534374 RRP7BPQ9NSQ0 103 aa36.11■■■■□ 3.37
YIF1A-213ENST00000534374 RNF17Q9BXT8 1623 aaKnown RBP36.11■■■■□ 3.37
YIF1A-213ENST00000534374 CAMSAP1Q5T5Y3 1602 aa36.1■■■■□ 3.37
YIF1A-213ENST00000534374 KIF15Q9NS87 1388 aa36.1■■■■□ 3.37
YIF1A-213ENST00000534374 MYO3AQ8NEV4 1616 aa36.09■■■■□ 3.37
YIF1A-213ENST00000534374 DNMT1P26358 1616 aaKnown RBP36.08■■■■□ 3.37
YIF1A-213ENST00000534374 TNRQ92752 1358 aa36.08■■■■□ 3.37
YIF1A-213ENST00000534374 ZNF142P52746 1687 aaPredicted RBP36.07■■■■□ 3.37
YIF1A-213ENST00000534374 CEP170BQ9Y4F5 1589 aaPredicted RBP36.07■■■■□ 3.37
YIF1A-213ENST00000534374 PKD2Q13563 968 aa36.06■■■■□ 3.36
YIF1A-213ENST00000534374 CROCC2H7BZ55 1655 aa36.06■■■■□ 3.36
YIF1A-213ENST00000534374 A2ML1A8K2U0 1454 aa36.05■■■■□ 3.36
YIF1A-213ENST00000534374 PLA2R1Q13018 1463 aa36.04■■■■□ 3.36
YIF1A-213ENST00000534374 ERBINQ96RT1 1412 aa36.03■■■■□ 3.36
YIF1A-213ENST00000534374 ANKRD30AQ9BXX3 1397 aa36.02■■■■□ 3.36
YIF1A-213ENST00000534374 NCKAP5LQ9HCH0 1330 aa36.02■■■■□ 3.36
YIF1A-213ENST00000534374 CHIC2Q9UKJ5 165 aa36.01■■■■□ 3.36
YIF1A-213ENST00000534374 ABCC3O15438 1527 aa36.01■■■■□ 3.36
YIF1A-213ENST00000534374 FAM50AQ14320 339 aaKnown RBP35.99■■■■□ 3.35
YIF1A-213ENST00000534374 ZC3H13Q5T200 1668 aaKnown RBP35.98■■■■□ 3.35
YIF1A-213ENST00000534374 MROH1Q8NDA8 1641 aa35.97■■■■□ 3.35
YIF1A-213ENST00000534374 NLRP1Q9C000 1473 aa35.93■■■■□ 3.34
YIF1A-213ENST00000534374 THEMISQ8N1K5 641 aaPredicted RBP35.92■■■■□ 3.34
YIF1A-213ENST00000534374 ADGRL2O95490 1459 aa35.89■■■■□ 3.34
YIF1A-213ENST00000534374 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.88■■■■□ 3.33
YIF1A-213ENST00000534374 PRDM15P57071 1507 aaPredicted RBP35.88■■■■□ 3.33
YIF1A-213ENST00000534374 SPATA31D1Q6ZQQ2 1576 aa35.86■■■■□ 3.33
YIF1A-213ENST00000534374 ARHGAP31Q2M1Z3 1444 aa35.86■■■■□ 3.33
YIF1A-213ENST00000534374 KANK1Q14678 1352 aa35.86■■■■□ 3.33
YIF1A-213ENST00000534374 ERVK-7P63135 1459 aa35.84■■■■□ 3.33
YIF1A-213ENST00000534374 CEP152O94986 1710 aa35.83■■■■□ 3.33
YIF1A-213ENST00000534374 ANKLE2Q86XL3 938 aa35.83■■■■□ 3.33
YIF1A-213ENST00000534374 DEPDC5O75140 1603 aa35.83■■■■□ 3.33
YIF1A-213ENST00000534374 LTBP4Q8N2S1 1624 aa35.82■■■■□ 3.32
YIF1A-213ENST00000534374 CFAP65Q6ZU64 1925 aaKnown RBP35.81■■■■□ 3.32
YIF1A-213ENST00000534374 UGGT1Q9NYU2 1555 aa35.81■■■■□ 3.32
YIF1A-213ENST00000534374 IQSEC2Q5JU85 1478 aa35.8■■■■□ 3.32
YIF1A-213ENST00000534374 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.79■■■■□ 3.321e-8■■■■□ 23.1
YIF1A-213ENST00000534374 ANKRD50Q9ULJ7 1429 aa35.74■■■■□ 3.31
YIF1A-213ENST00000534374 ZNF335Q9H4Z2 1342 aaPredicted RBP35.74■■■■□ 3.31
YIF1A-213ENST00000534374 PPARGC1BQ86YN6 1023 aaKnown RBP35.73■■■■□ 3.31
YIF1A-213ENST00000534374 LMTK2Q8IWU2 1503 aa35.73■■■■□ 3.31
YIF1A-213ENST00000534374 VWDEQ8N2E2 1590 aa35.72■■■■□ 3.31
YIF1A-213ENST00000534374 ROCK1Q13464 1354 aa35.69■■■■□ 3.3
YIF1A-213ENST00000534374 POLR1AO95602 1720 aaPredicted RBP35.68■■■■□ 3.3
YIF1A-213ENST00000534374 NEURL4Q96JN8 1562 aa35.66■■■■□ 3.3
YIF1A-213ENST00000534374 MED14O60244 1454 aa35.66■■■■□ 3.3
YIF1A-213ENST00000534374 NPHP4O75161 1426 aaPredicted RBP35.61■■■■□ 3.29
YIF1A-213ENST00000534374 UBR1Q8IWV7 1749 aa35.58■■■■□ 3.29
YIF1A-213ENST00000534374 IDI1Q13907 227 aa35.57■■■■□ 3.28
YIF1A-213ENST00000534374 ITGAEP38570 1179 aa35.56■■■■□ 3.28
YIF1A-213ENST00000534374 EFCAB6Q5THR3 1501 aa35.55■■■■□ 3.28
YIF1A-213ENST00000534374 NOS1P29475 1434 aa35.55■■■■□ 3.28
YIF1A-213ENST00000534374 SLC52A1Q9NWF4 448 aa35.54■■■■□ 3.28
YIF1A-213ENST00000534374 STAG3Q9UJ98 1225 aa35.53■■■■□ 3.28
YIF1A-213ENST00000534374 TXNDC2Q86VQ3 553 aa35.52■■■■□ 3.28
YIF1A-213ENST00000534374 RPRD2Q5VT52 1461 aaKnown RBP35.52■■■■□ 3.28
YIF1A-213ENST00000534374 ARHGAP23Q9P227 1491 aa35.52■■■■□ 3.28
YIF1A-213ENST00000534374 SLIT1O75093 1534 aa35.51■■■■□ 3.27
YIF1A-213ENST00000534374 LTKP29376 864 aa35.5■■■■□ 3.27
YIF1A-213ENST00000534374 EID1Q9Y6B2 187 aa35.5■■■■□ 3.27
YIF1A-213ENST00000534374 SCAF11Q99590 1463 aaKnown RBP35.48■■■■□ 3.27
YIF1A-213ENST00000534374 IQGAP1P46940 1657 aa35.48■■■■□ 3.27
YIF1A-213ENST00000534374 RRBP1Q9P2E9 1410 aaKnown RBP35.48■■■■□ 3.27
YIF1A-213ENST00000534374 CPS1P31327 1500 aa35.47■■■■□ 3.27
YIF1A-213ENST00000534374 PIK3C2BO00750 1634 aa35.46■■■■□ 3.27
YIF1A-213ENST00000534374 UBAP1LF5GYI3 381 aa35.46■■■■□ 3.27
YIF1A-213ENST00000534374 TMEM2Q9UHN6 1383 aa35.46■■■■□ 3.27
YIF1A-213ENST00000534374 UNC13BO14795 1591 aa35.45■■■■□ 3.27
YIF1A-213ENST00000534374 KDM5AP29375 1690 aaKnown RBP35.45■■■■□ 3.27
YIF1A-213ENST00000534374 SYNMO15061 1565 aa35.44■■■■□ 3.26
YIF1A-213ENST00000534374 TET3O43151 1660 aa35.43■■■■□ 3.26
YIF1A-213ENST00000534374 DISP3Q9P2K9 1392 aa35.43■■■■□ 3.26
YIF1A-213ENST00000534374 NUP155O75694 1391 aa35.39■■■■□ 3.26
YIF1A-213ENST00000534374 GCC2Q8IWJ2 1684 aa35.37■■■■□ 3.25
YIF1A-213ENST00000534374 IQGAP3Q86VI3 1631 aa35.33■■■■□ 3.25
YIF1A-213ENST00000534374 TOM1O60784 492 aa35.31■■■■□ 3.24
YIF1A-213ENST00000534374 ADGRB3O60242 1522 aa35.31■■■■□ 3.24
YIF1A-213ENST00000534374 HDGFP51858 240 aaKnown RBP35.28■■■■□ 3.24
YIF1A-213ENST00000534374 E9PCH4 1651 aa35.27■■■■□ 3.24
YIF1A-213ENST00000534374 STRCP1A6NGW2 1772 aa35.23■■■■□ 3.23
YIF1A-213ENST00000534374 LRRC7Q96NW7 1537 aa35.22■■■■□ 3.23
YIF1A-213ENST00000534374 NAIPQ13075 1403 aa35.22■■■■□ 3.23
YIF1A-213ENST00000534374 TMEM131LA2VDJ0 1609 aa35.18■■■■□ 3.22
YIF1A-213ENST00000534374 ZFYVE9O95405 1425 aa35.17■■■■□ 3.22
YIF1A-213ENST00000534374 CHGAP10645 457 aaKnown RBP35.17■■■■□ 3.22
YIF1A-213ENST00000534374 SLC26A8Q96RN1 970 aa35.17■■■■□ 3.22
YIF1A-213ENST00000534374 KCNA6P17658 529 aa35.16■■■■□ 3.22
YIF1A-213ENST00000534374 ILDR2Q71H61 639 aa35.16■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 191.9 ms