RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 RTEL1-TNFRSF6BF6WH68 1400 aa23.03■■□□□ 1.28
SHARPIN-208ENST00000533948 SCAF1Q9H7N4 1312 aaKnown RBP23.03■■□□□ 1.28
SHARPIN-208ENST00000533948 TNRQ92752 1358 aa23.02■■□□□ 1.28
SHARPIN-208ENST00000533948 KIF3BO15066 747 aa23.01■■□□□ 1.27
SHARPIN-208ENST00000533948 HSPA1LP34931 641 aa23.01■■□□□ 1.27
SHARPIN-208ENST00000533948 PIP4K2BP78356 416 aa23.01■■□□□ 1.27
SHARPIN-208ENST00000533948 CEP162Q5TB80 1403 aa22.99■■□□□ 1.27
SHARPIN-208ENST00000533948 PZPP20742 1482 aa22.99■■□□□ 1.27
SHARPIN-208ENST00000533948 KDM5DQ9BY66 1539 aa22.99■■□□□ 1.27
SHARPIN-208ENST00000533948 SHANK2Q9UPX8 1470 aa22.98■■□□□ 1.27
SHARPIN-208ENST00000533948 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.97■■□□□ 1.27
SHARPIN-208ENST00000533948 CCDC141Q6ZP82 1450 aa22.97■■□□□ 1.27
SHARPIN-208ENST00000533948 CPS1P31327 1500 aa22.97■■□□□ 1.27
SHARPIN-208ENST00000533948 MED1Q15648 1581 aaPredicted RBP22.97■■□□□ 1.27
SHARPIN-208ENST00000533948 CAMSAP2Q08AD1 1489 aa22.95■■□□□ 1.26
SHARPIN-208ENST00000533948 VWDEQ8N2E2 1590 aa22.93■■□□□ 1.26
SHARPIN-208ENST00000533948 WASHC2CQ9Y4E1 1318 aa22.93■■□□□ 1.26
SHARPIN-208ENST00000533948 TOM1O60784 492 aa22.92■■□□□ 1.26
SHARPIN-208ENST00000533948 NCOA2Q15596 1464 aa22.92■■□□□ 1.26
SHARPIN-208ENST00000533948 RSPH4AQ5TD94 716 aa22.91■■□□□ 1.26
SHARPIN-208ENST00000533948 ANKLE2Q86XL3 938 aa22.91■■□□□ 1.26
SHARPIN-208ENST00000533948 FAM135AQ9P2D6 1515 aa22.91■■□□□ 1.26
SHARPIN-208ENST00000533948 MIA2Q96PC5 1412 aa22.91■■□□□ 1.26
SHARPIN-208ENST00000533948 ALKQ9UM73 1620 aa22.9■■□□□ 1.26
SHARPIN-208ENST00000533948 UGGT1Q9NYU2 1555 aa22.89■■□□□ 1.26
SHARPIN-208ENST00000533948 NPHP4O75161 1426 aaPredicted RBP22.89■■□□□ 1.25
SHARPIN-208ENST00000533948 NLRP1Q9C000 1473 aa22.88■■□□□ 1.25
SHARPIN-208ENST00000533948 THEMISQ8N1K5 641 aaPredicted RBP22.87■■□□□ 1.25
SHARPIN-208ENST00000533948 DEPDC5O75140 1603 aa22.86■■□□□ 1.25
SHARPIN-208ENST00000533948 MED14O60244 1454 aa22.85■■□□□ 1.25
SHARPIN-208ENST00000533948 STRCP1A6NGW2 1772 aa22.84■■□□□ 1.25
SHARPIN-208ENST00000533948 ARHGEF5Q12774 1597 aa22.84■■□□□ 1.25
SHARPIN-208ENST00000533948 IQGAP1P46940 1657 aa22.84■■□□□ 1.25
SHARPIN-208ENST00000533948 TSPY4P0CV99 314 aa22.83■■□□□ 1.25
SHARPIN-208ENST00000533948 TSPY10P0CW01 314 aa22.83■■□□□ 1.25
SHARPIN-208ENST00000533948 SENP3Q9H4L4 574 aaPredicted RBP22.83■■□□□ 1.25
SHARPIN-208ENST00000533948 RNF17Q9BXT8 1623 aaKnown RBP22.81■■□□□ 1.24
SHARPIN-208ENST00000533948 ABCC3O15438 1527 aa22.81■■□□□ 1.24
SHARPIN-208ENST00000533948 LRRC7Q96NW7 1537 aa22.77■■□□□ 1.24
SHARPIN-208ENST00000533948 ERVK-7P63135 1459 aa22.77■■□□□ 1.24
SHARPIN-208ENST00000533948 PHF23Q9BUL5 403 aaPredicted RBP22.76■■□□□ 1.23
SHARPIN-208ENST00000533948 MROH1Q8NDA8 1641 aa22.75■■□□□ 1.23
SHARPIN-208ENST00000533948 ZC3H13Q5T200 1668 aaKnown RBP22.75■■□□□ 1.23
SHARPIN-208ENST00000533948 CEP152O94986 1710 aa22.74■■□□□ 1.23
SHARPIN-208ENST00000533948 CFAP65Q6ZU64 1925 aaKnown RBP22.73■■□□□ 1.23
SHARPIN-208ENST00000533948 MAST1Q9Y2H9 1570 aa22.73■■□□□ 1.23
SHARPIN-208ENST00000533948 SYNMO15061 1565 aa22.72■■□□□ 1.23
SHARPIN-208ENST00000533948 EIF2AK4Q9P2K8 1649 aaKnown RBP22.71■■□□□ 1.23
SHARPIN-208ENST00000533948 UBR1Q8IWV7 1749 aa22.71■■□□□ 1.23
SHARPIN-208ENST00000533948 LRRC9Q6ZRR7 1453 aa22.7■■□□□ 1.22
SHARPIN-208ENST00000533948 LOC105371045A0A1W2PR82 267 aa22.69■■□□□ 1.22
SHARPIN-208ENST00000533948 SCAF11Q99590 1463 aaKnown RBP22.67■■□□□ 1.22
SHARPIN-208ENST00000533948 LTKP29376 864 aa22.66■■□□□ 1.22
SHARPIN-208ENST00000533948 KANK4Q5T7N3 995 aaPredicted RBP22.65■■□□□ 1.22
SHARPIN-208ENST00000533948 ARHGAP23Q9P227 1491 aa22.63■■□□□ 1.21
SHARPIN-208ENST00000533948 XIRP1Q702N8 1843 aaKnown RBP22.63■■□□□ 1.21
SHARPIN-208ENST00000533948 VPS8Q8N3P4 1428 aa22.62■■□□□ 1.21
SHARPIN-208ENST00000533948 SLIT1O75093 1534 aa22.62■■□□□ 1.21
SHARPIN-208ENST00000533948 DUOX2Q9NRD8 1548 aa22.62■■□□□ 1.21
SHARPIN-208ENST00000533948 TXNDC2Q86VQ3 553 aa22.61■■□□□ 1.21
SHARPIN-208ENST00000533948 MYOM3Q5VTT5 1437 aa22.6■■□□□ 1.21
SHARPIN-208ENST00000533948 RGS17Q9UGC6 210 aaPredicted RBP22.6■■□□□ 1.21
SHARPIN-208ENST00000533948 PRDM15P57071 1507 aaPredicted RBP22.59■■□□□ 1.21
SHARPIN-208ENST00000533948 PIK3C2BO00750 1634 aa22.57■■□□□ 1.2
SHARPIN-208ENST00000533948 ARHGAP31Q2M1Z3 1444 aa22.57■■□□□ 1.2
SHARPIN-208ENST00000533948 KIF15Q9NS87 1388 aa22.56■■□□□ 1.2
SHARPIN-208ENST00000533948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.54■■□□□ 1.22e-7■□□□□ 9.7
SHARPIN-208ENST00000533948 RRP7BPQ9NSQ0 103 aa22.54■■□□□ 1.2
SHARPIN-208ENST00000533948 CROCC2H7BZ55 1655 aa22.53■■□□□ 1.2
SHARPIN-208ENST00000533948 EID1Q9Y6B2 187 aa22.53■■□□□ 1.2
SHARPIN-208ENST00000533948 TMEM2Q9UHN6 1383 aa22.52■■□□□ 1.2
SHARPIN-208ENST00000533948 ABCC5O15440 1437 aa22.52■■□□□ 1.2
SHARPIN-208ENST00000533948 ERBINQ96RT1 1412 aa22.52■■□□□ 1.2
SHARPIN-208ENST00000533948 MAP3K1Q13233 1512 aa22.51■■□□□ 1.19
SHARPIN-208ENST00000533948 TMEM94Q12767 1356 aa22.5■■□□□ 1.19
SHARPIN-208ENST00000533948 RBM33Q96EV2 1170 aaKnown RBP22.49■■□□□ 1.19
SHARPIN-208ENST00000533948 STAG3Q9UJ98 1225 aa22.48■■□□□ 1.19
SHARPIN-208ENST00000533948 FAM135BQ49AJ0 1406 aa22.48■■□□□ 1.19
SHARPIN-208ENST00000533948 EFCAB6Q5THR3 1501 aa22.47■■□□□ 1.19
SHARPIN-208ENST00000533948 PTPN23Q9H3S7 1636 aa22.46■■□□□ 1.19
SHARPIN-208ENST00000533948 APLP2Q06481 763 aa22.46■■□□□ 1.19
SHARPIN-208ENST00000533948 IDI1Q13907 227 aa22.45■■□□□ 1.18
SHARPIN-208ENST00000533948 SLC26A8Q96RN1 970 aa22.45■■□□□ 1.18
SHARPIN-208ENST00000533948 DAPK1P53355 1430 aa22.45■■□□□ 1.18
SHARPIN-208ENST00000533948 ROBO1Q9Y6N7 1651 aa22.45■■□□□ 1.18
SHARPIN-208ENST00000533948 POTEAQ6S8J7 498 aa22.44■■□□□ 1.18
SHARPIN-208ENST00000533948 TET3O43151 1660 aa22.43■■□□□ 1.18
SHARPIN-208ENST00000533948 KCNA6P17658 529 aa22.43■■□□□ 1.18
SHARPIN-208ENST00000533948 KANK1Q14678 1352 aa22.42■■□□□ 1.18
SHARPIN-208ENST00000533948 KDM5AP29375 1690 aaKnown RBP22.42■■□□□ 1.18
SHARPIN-208ENST00000533948 PROSER2Q86WR7 435 aaPredicted RBP22.41■■□□□ 1.18
SHARPIN-208ENST00000533948 CHIC2Q9UKJ5 165 aa22.41■■□□□ 1.18
SHARPIN-208ENST00000533948 LMTK2Q8IWU2 1503 aa22.41■■□□□ 1.18
SHARPIN-208ENST00000533948 ADGRB3O60242 1522 aa22.38■■□□□ 1.17
SHARPIN-208ENST00000533948 NOS1P29475 1434 aa22.38■■□□□ 1.17
SHARPIN-208ENST00000533948 NWD1Q149M9 1564 aa22.38■■□□□ 1.17
SHARPIN-208ENST00000533948 FGD6Q6ZV73 1430 aa22.36■■□□□ 1.17
SHARPIN-208ENST00000533948 ANKRD30AQ9BXX3 1397 aa22.35■■□□□ 1.17
SHARPIN-208ENST00000533948 NKTRP30414 1462 aaKnown RBP22.34■■□□□ 1.17
SHARPIN-208ENST00000533948 SETD1AO15047 1707 aaKnown RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms