RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 FAM135AQ9P2D6 1515 aa29.71■■■□□ 2.35
SSH3-209ENST00000532600 CAMSAP1Q5T5Y3 1602 aa29.71■■■□□ 2.35
SSH3-209ENST00000532600 RNF17Q9BXT8 1623 aaKnown RBP29.71■■■□□ 2.35
SSH3-209ENST00000532600 CROCC2H7BZ55 1655 aa29.71■■■□□ 2.35
SSH3-209ENST00000532600 FGD6Q6ZV73 1430 aa29.71■■■□□ 2.35
SSH3-209ENST00000532600 CEP170BQ9Y4F5 1589 aaPredicted RBP29.69■■■□□ 2.34
SSH3-209ENST00000532600 TCOF1Q13428 1488 aaKnown RBP29.69■■■□□ 2.34
SSH3-209ENST00000532600 PTPRTO14522 1441 aa29.68■■■□□ 2.34
SSH3-209ENST00000532600 MROH1Q8NDA8 1641 aa29.67■■■□□ 2.34
SSH3-209ENST00000532600 EIF2AK4Q9P2K8 1649 aaKnown RBP29.67■■■□□ 2.34
SSH3-209ENST00000532600 FBXO31Q5XUX0 539 aaPredicted RBP29.67■■■□□ 2.34
SSH3-209ENST00000532600 DMRT2Q9Y5R5 561 aa29.67■■■□□ 2.34
SSH3-209ENST00000532600 PZPP20742 1482 aa29.67■■■□□ 2.34
SSH3-209ENST00000532600 SHANK2Q9UPX8 1470 aa29.66■■■□□ 2.34
SSH3-209ENST00000532600 DNMT1P26358 1616 aaKnown RBP29.65■■■□□ 2.34
SSH3-209ENST00000532600 WASHC2CQ9Y4E1 1318 aa29.65■■■□□ 2.34
SSH3-209ENST00000532600 CERKQ8TCT0 537 aa29.64■■■□□ 2.34
SSH3-209ENST00000532600 DAPK1P53355 1430 aa29.63■■■□□ 2.33
SSH3-209ENST00000532600 DUOX2Q9NRD8 1548 aa29.62■■■□□ 2.33
SSH3-209ENST00000532600 ABCC3O15438 1527 aa29.61■■■□□ 2.33
SSH3-209ENST00000532600 A2ML1A8K2U0 1454 aa29.6■■■□□ 2.33
SSH3-209ENST00000532600 NCKAP5LQ9HCH0 1330 aa29.59■■■□□ 2.33
SSH3-209ENST00000532600 TNRQ92752 1358 aa29.59■■■□□ 2.33
SSH3-209ENST00000532600 PLA2R1Q13018 1463 aa29.59■■■□□ 2.33
SSH3-209ENST00000532600 KIF15Q9NS87 1388 aa29.58■■■□□ 2.33
SSH3-209ENST00000532600 ZC3H13Q5T200 1668 aaKnown RBP29.57■■■□□ 2.32
SSH3-209ENST00000532600 LTBP4Q8N2S1 1624 aa29.54■■■□□ 2.32
SSH3-209ENST00000532600 RRP7BPQ9NSQ0 103 aa29.54■■■□□ 2.32
SSH3-209ENST00000532600 CEP152O94986 1710 aa29.54■■■□□ 2.32
SSH3-209ENST00000532600 ERBINQ96RT1 1412 aa29.52■■■□□ 2.32
SSH3-209ENST00000532600 PRDM15P57071 1507 aaPredicted RBP29.5■■■□□ 2.31
SSH3-209ENST00000532600 SPATA31D1Q6ZQQ2 1576 aa29.49■■■□□ 2.31
SSH3-209ENST00000532600 PKD2Q13563 968 aa29.48■■■□□ 2.31
SSH3-209ENST00000532600 CHIC2Q9UKJ5 165 aa29.48■■■□□ 2.31
SSH3-209ENST00000532600 DEPDC5O75140 1603 aa29.48■■■□□ 2.31
SSH3-209ENST00000532600 ERVK-7P63135 1459 aa29.45■■■□□ 2.31
SSH3-209ENST00000532600 NLRP1Q9C000 1473 aa29.45■■■□□ 2.31
SSH3-209ENST00000532600 NEURL4Q96JN8 1562 aa29.43■■■□□ 2.3
SSH3-209ENST00000532600 ADGRL2O95490 1459 aa29.43■■■□□ 2.3
SSH3-209ENST00000532600 ANKRD30AQ9BXX3 1397 aa29.43■■■□□ 2.3
SSH3-209ENST00000532600 POLR1AO95602 1720 aaPredicted RBP29.41■■■□□ 2.3
SSH3-209ENST00000532600 UGGT1Q9NYU2 1555 aa29.4■■■□□ 2.3
SSH3-209ENST00000532600 FAM50AQ14320 339 aaKnown RBP29.4■■■□□ 2.3
SSH3-209ENST00000532600 ZNF335Q9H4Z2 1342 aaPredicted RBP29.4■■■□□ 2.3
SSH3-209ENST00000532600 CFAP65Q6ZU64 1925 aaKnown RBP29.39■■■□□ 2.3
SSH3-209ENST00000532600 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.39■■■□□ 2.29
SSH3-209ENST00000532600 VWDEQ8N2E2 1590 aa29.38■■■□□ 2.29
SSH3-209ENST00000532600 ARHGAP31Q2M1Z3 1444 aa29.37■■■□□ 2.29
SSH3-209ENST00000532600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.35■■■□□ 2.29
SSH3-209ENST00000532600 LMTK2Q8IWU2 1503 aa29.33■■■□□ 2.29
SSH3-209ENST00000532600 THEMISQ8N1K5 641 aaPredicted RBP29.32■■■□□ 2.28
SSH3-209ENST00000532600 IQSEC2Q5JU85 1478 aa29.3■■■□□ 2.28
SSH3-209ENST00000532600 UBR1Q8IWV7 1749 aa29.3■■■□□ 2.28
SSH3-209ENST00000532600 PPARGC1BQ86YN6 1023 aaKnown RBP29.29■■■□□ 2.28
SSH3-209ENST00000532600 MED14O60244 1454 aa29.28■■■□□ 2.28
SSH3-209ENST00000532600 ANKLE2Q86XL3 938 aa29.27■■■□□ 2.28
SSH3-209ENST00000532600 KANK1Q14678 1352 aa29.26■■■□□ 2.28
SSH3-209ENST00000532600 ANKRD50Q9ULJ7 1429 aa29.26■■■□□ 2.27
SSH3-209ENST00000532600 NPHP4O75161 1426 aaPredicted RBP29.23■■■□□ 2.27
SSH3-209ENST00000532600 EFCAB6Q5THR3 1501 aa29.23■■■□□ 2.27
SSH3-209ENST00000532600 PIK3C2BO00750 1634 aa29.21■■■□□ 2.27
SSH3-209ENST00000532600 SYNMO15061 1565 aa29.21■■■□□ 2.27
SSH3-209ENST00000532600 IQGAP1P46940 1657 aa29.21■■■□□ 2.27
SSH3-209ENST00000532600 ARHGAP23Q9P227 1491 aa29.19■■■□□ 2.26
SSH3-209ENST00000532600 ROCK1Q13464 1354 aa29.17■■■□□ 2.26
SSH3-209ENST00000532600 SLIT1O75093 1534 aa29.17■■■□□ 2.26
SSH3-209ENST00000532600 NOS1P29475 1434 aa29.17■■■□□ 2.26
SSH3-209ENST00000532600 UNC13BO14795 1591 aa29.16■■■□□ 2.26
SSH3-209ENST00000532600 LTKP29376 864 aa29.13■■■□□ 2.25
SSH3-209ENST00000532600 SCAF11Q99590 1463 aaKnown RBP29.12■■■□□ 2.25
SSH3-209ENST00000532600 STRCP1A6NGW2 1772 aa29.12■■■□□ 2.25
SSH3-209ENST00000532600 CPS1P31327 1500 aa29.12■■■□□ 2.25
SSH3-209ENST00000532600 IDI1Q13907 227 aa29.12■■■□□ 2.25
SSH3-209ENST00000532600 TET3O43151 1660 aa29.11■■■□□ 2.25
SSH3-209ENST00000532600 KDM5AP29375 1690 aaKnown RBP29.11■■■□□ 2.25
SSH3-209ENST00000532600 ITGAEP38570 1179 aa29.08■■■□□ 2.25
SSH3-209ENST00000532600 RPRD2Q5VT52 1461 aaKnown RBP29.07■■■□□ 2.24
SSH3-209ENST00000532600 TMEM2Q9UHN6 1383 aa29.07■■■□□ 2.24
SSH3-209ENST00000532600 GCC2Q8IWJ2 1684 aa29.06■■■□□ 2.24
SSH3-209ENST00000532600 TXNDC2Q86VQ3 553 aa29.06■■■□□ 2.24
SSH3-209ENST00000532600 UBAP1LF5GYI3 381 aa29.05■■■□□ 2.24
SSH3-209ENST00000532600 ADGRB3O60242 1522 aa29.04■■■□□ 2.24
SSH3-209ENST00000532600 RRBP1Q9P2E9 1410 aaKnown RBP29.03■■■□□ 2.24
SSH3-209ENST00000532600 IQGAP3Q86VI3 1631 aa29.03■■■□□ 2.24
SSH3-209ENST00000532600 E9PCH4 1651 aa29.02■■■□□ 2.24
SSH3-209ENST00000532600 ALKQ9UM73 1620 aa28.99■■■□□ 2.23
SSH3-209ENST00000532600 SLC52A1Q9NWF4 448 aa28.98■■■□□ 2.23
SSH3-209ENST00000532600 STAG3Q9UJ98 1225 aa28.98■■■□□ 2.23
SSH3-209ENST00000532600 LRRC7Q96NW7 1537 aa28.98■■■□□ 2.23
SSH3-209ENST00000532600 MYO5BQ9ULV0 1848 aa28.97■■■□□ 2.23
SSH3-209ENST00000532600 EID1Q9Y6B2 187 aa28.96■■■□□ 2.23
SSH3-209ENST00000532600 TMEM131LA2VDJ0 1609 aa28.94■■■□□ 2.22
SSH3-209ENST00000532600 NUP155O75694 1391 aa28.93■■■□□ 2.22
SSH3-209ENST00000532600 ZFYVE9O95405 1425 aa28.91■■■□□ 2.22
SSH3-209ENST00000532600 XIRP1Q702N8 1843 aaKnown RBP28.88■■■□□ 2.21
SSH3-209ENST00000532600 NAIPQ13075 1403 aa28.86■■■□□ 2.21
SSH3-209ENST00000532600 TOM1O60784 492 aa28.85■■■□□ 2.21
SSH3-209ENST00000532600 PIP4K2BP78356 416 aa28.84■■■□□ 2.21
SSH3-209ENST00000532600 SLC26A8Q96RN1 970 aa28.83■■■□□ 2.21
SSH3-209ENST00000532600 RIMS2Q9UQ26 1411 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms