RNA–Protein interactions for RNA: ENST00000532475.1

NUP98-219, Transcript of nucleoporin 98, humanhuman

TSL 4

Gene NUP98, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-219ENST00000532475 MROH2AA6NES4 1674 aa13.48□□□□□ -0.25
NUP98-219ENST00000532475 CLTCQ00610 1675 aaKnown RBP13.48□□□□□ -0.25
NUP98-219ENST00000532475 MED1Q15648 1581 aaPredicted RBP13.48□□□□□ -0.25
NUP98-219ENST00000532475 SYCP2Q9BX26 1530 aa13.48□□□□□ -0.25
NUP98-219ENST00000532475 CDC42BPAQ5VT25 1732 aa13.47□□□□□ -0.25
NUP98-219ENST00000532475 MYO3AQ8NEV4 1616 aa13.46□□□□□ -0.25
NUP98-219ENST00000532475 ATXN8OSP0DMR3 200 aa13.46□□□□□ -0.25
NUP98-219ENST00000532475 PRKCSHP14314 528 aaPredicted RBP13.46□□□□□ -0.25
NUP98-219ENST00000532475 SHANK2Q9UPX8 1470 aa13.46□□□□□ -0.25
NUP98-219ENST00000532475 KIAA1107Q9UPP5 1409 aa13.46□□□□□ -0.26
NUP98-219ENST00000532475 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.45□□□□□ -0.26
NUP98-219ENST00000532475 A2ML1A8K2U0 1454 aa13.45□□□□□ -0.26
NUP98-219ENST00000532475 HAP1P54257 671 aaPredicted RBP13.45□□□□□ -0.26
NUP98-219ENST00000532475 ANKLE2Q86XL3 938 aa13.45□□□□□ -0.26
NUP98-219ENST00000532475 ATP7AQ04656 1500 aa13.44□□□□□ -0.26
NUP98-219ENST00000532475 CCDC18Q5T9S5 1454 aa13.44□□□□□ -0.26
NUP98-219ENST00000532475 RGS17Q9UGC6 210 aaPredicted RBP13.44□□□□□ -0.26
NUP98-219ENST00000532475 DNMT1P26358 1616 aaKnown RBP13.43□□□□□ -0.26
NUP98-219ENST00000532475 KIF3BO15066 747 aa13.43□□□□□ -0.26
NUP98-219ENST00000532475 PLXNC1O60486 1568 aa13.43□□□□□ -0.26
NUP98-219ENST00000532475 ZNF142P52746 1687 aaPredicted RBP13.43□□□□□ -0.26
NUP98-219ENST00000532475 THEMISQ8N1K5 641 aaPredicted RBP13.42□□□□□ -0.26
NUP98-219ENST00000532475 CCNB3Q8WWL7 1395 aa13.42□□□□□ -0.26
NUP98-219ENST00000532475 TNRQ92752 1358 aa13.42□□□□□ -0.26
NUP98-219ENST00000532475 CPS1P31327 1500 aa13.41□□□□□ -0.26
NUP98-219ENST00000532475 ALKQ9UM73 1620 aa13.41□□□□□ -0.26
NUP98-219ENST00000532475 DHX29Q7Z478 1369 aaKnown RBP13.41□□□□□ -0.26
NUP98-219ENST00000532475 WASHC2CQ9Y4E1 1318 aa13.4□□□□□ -0.26
NUP98-219ENST00000532475 TAOK2Q9UL54 1235 aa13.4□□□□□ -0.26
NUP98-219ENST00000532475 NEURL4Q96JN8 1562 aa13.4□□□□□ -0.26
NUP98-219ENST00000532475 INO80Q9ULG1 1556 aaPredicted RBP13.39□□□□□ -0.27
NUP98-219ENST00000532475 PLEKHH2Q8IVE3 1493 aa13.38□□□□□ -0.27
NUP98-219ENST00000532475 MBD5Q9P267 1494 aa13.38□□□□□ -0.27
NUP98-219ENST00000532475 NPHP4O75161 1426 aaPredicted RBP13.38□□□□□ -0.27
NUP98-219ENST00000532475 MIA2Q96PC5 1412 aa13.38□□□□□ -0.27
NUP98-219ENST00000532475 VWDEQ8N2E2 1590 aa13.37□□□□□ -0.27
NUP98-219ENST00000532475 FYCO1Q9BQS8 1478 aa13.35□□□□□ -0.27
NUP98-219ENST00000532475 MTUS2Q5JR59 1369 aa13.34□□□□□ -0.27
NUP98-219ENST00000532475 RTEL1-TNFRSF6BF6WH68 1400 aa13.34□□□□□ -0.27
NUP98-219ENST00000532475 LRRC7Q96NW7 1537 aa13.34□□□□□ -0.27
NUP98-219ENST00000532475 POTEAQ6S8J7 498 aa13.33□□□□□ -0.28
NUP98-219ENST00000532475 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
NUP98-219ENST00000532475 MED14O60244 1454 aa13.33□□□□□ -0.28
NUP98-219ENST00000532475 PZPP20742 1482 aa13.33□□□□□ -0.28
NUP98-219ENST00000532475 UGGT1Q9NYU2 1555 aa13.31□□□□□ -0.28
NUP98-219ENST00000532475 MSH5O43196 834 aa13.3□□□□□ -0.28
NUP98-219ENST00000532475 LTKP29376 864 aa13.3□□□□□ -0.28
NUP98-219ENST00000532475 ADGBQ8N7X0 1667 aa13.3□□□□□ -0.28
NUP98-219ENST00000532475 POLR1AO95602 1720 aaPredicted RBP13.3□□□□□ -0.28
NUP98-219ENST00000532475 FAM135AQ9P2D6 1515 aa13.29□□□□□ -0.28
NUP98-219ENST00000532475 MYCNP04198 464 aaPredicted RBP13.29□□□□□ -0.28
NUP98-219ENST00000532475 STRCP1A6NGW2 1772 aa13.29□□□□□ -0.28
NUP98-219ENST00000532475 NLRP1Q9C000 1473 aa13.29□□□□□ -0.28
NUP98-219ENST00000532475 KDM5DQ9BY66 1539 aa13.28□□□□□ -0.28
NUP98-219ENST00000532475 RSPH4AQ5TD94 716 aa13.27□□□□□ -0.29
NUP98-219ENST00000532475 TXNDC2Q86VQ3 553 aa13.27□□□□□ -0.29
NUP98-219ENST00000532475 RBM33Q96EV2 1170 aaKnown RBP13.26□□□□□ -0.29
NUP98-219ENST00000532475 DEPDC5O75140 1603 aa13.25□□□□□ -0.29
NUP98-219ENST00000532475 TIAM1Q13009 1591 aa13.25□□□□□ -0.29
NUP98-219ENST00000532475 TSPY4P0CV99 314 aa13.25□□□□□ -0.29
NUP98-219ENST00000532475 TSPY10P0CW01 314 aa13.25□□□□□ -0.29
NUP98-219ENST00000532475 IQGAP1P46940 1657 aa13.23□□□□□ -0.29
NUP98-219ENST00000532475 CCDC141Q6ZP82 1450 aa13.23□□□□□ -0.29
NUP98-219ENST00000532475 CEP162Q5TB80 1403 aa13.22□□□□□ -0.29
NUP98-219ENST00000532475 TPRNQ4KMQ1 711 aa13.21□□□□□ -0.29
NUP98-219ENST00000532475 FAM135BQ49AJ0 1406 aa13.21□□□□□ -0.3
NUP98-219ENST00000532475 VSIG10Q8N0Z9 540 aa13.2□□□□□ -0.3
NUP98-219ENST00000532475 CAMSAP2Q08AD1 1489 aa13.2□□□□□ -0.3
NUP98-219ENST00000532475 NCOA2Q15596 1464 aa13.2□□□□□ -0.3
NUP98-219ENST00000532475 SRCAPQ6ZRS2 3230 aa13.2□□□□□ -0.3
NUP98-219ENST00000532475 SLC4A2P04920 1241 aa13.19□□□□□ -0.3
NUP98-219ENST00000532475 TMEM94Q12767 1356 aa13.19□□□□□ -0.3
NUP98-219ENST00000532475 ERVK-7P63135 1459 aa13.18□□□□□ -0.3
NUP98-219ENST00000532475 SCAF11Q99590 1463 aaKnown RBP13.18□□□□□ -0.3
NUP98-219ENST00000532475 RNF17Q9BXT8 1623 aaKnown RBP13.18□□□□□ -0.3
NUP98-219ENST00000532475 SLC26A8Q96RN1 970 aa13.18□□□□□ -0.3
NUP98-219ENST00000532475 EID1Q9Y6B2 187 aa13.18□□□□□ -0.3
NUP98-219ENST00000532475 ABCC3O15438 1527 aa13.18□□□□□ -0.3
NUP98-219ENST00000532475 CFAP65Q6ZU64 1925 aaKnown RBP13.17□□□□□ -0.3
NUP98-219ENST00000532475 ZC3H13Q5T200 1668 aaKnown RBP13.16□□□□□ -0.3
NUP98-219ENST00000532475 KCNA6P17658 529 aa13.16□□□□□ -0.3
NUP98-219ENST00000532475 PROSER2Q86WR7 435 aaPredicted RBP13.16□□□□□ -0.3
NUP98-219ENST00000532475 EHBP1L1Q8N3D4 1523 aa13.16□□□□□ -0.3
NUP98-219ENST00000532475 ARHGAP23Q9P227 1491 aa13.15□□□□□ -0.3
NUP98-219ENST00000532475 IDI1Q13907 227 aa13.14□□□□□ -0.31
NUP98-219ENST00000532475 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.14□□□□□ -0.313e-8■■■■□ 20.9
NUP98-219ENST00000532475 STAG3Q9UJ98 1225 aa13.14□□□□□ -0.31
NUP98-219ENST00000532475 SYNMO15061 1565 aa13.14□□□□□ -0.31
NUP98-219ENST00000532475 XIRP1Q702N8 1843 aaKnown RBP13.13□□□□□ -0.31
NUP98-219ENST00000532475 TMEM2Q9UHN6 1383 aa13.13□□□□□ -0.31
NUP98-219ENST00000532475 SLAIN2Q9P270 581 aa13.13□□□□□ -0.31
NUP98-219ENST00000532475 UPF1Q92900 1129 aaKnown RBP eCLIP13.12□□□□□ -0.31
NUP98-219ENST00000532475 UBR1Q8IWV7 1749 aa13.12□□□□□ -0.31
NUP98-219ENST00000532475 SLIT1O75093 1534 aa13.12□□□□□ -0.31
NUP98-219ENST00000532475 KANK4Q5T7N3 995 aaPredicted RBP13.11□□□□□ -0.31
NUP98-219ENST00000532475 RRP7BPQ9NSQ0 103 aa13.11□□□□□ -0.31
NUP98-219ENST00000532475 MROH1Q8NDA8 1641 aa13.1□□□□□ -0.31
NUP98-219ENST00000532475 DAXXQ9UER7 740 aaPredicted RBP13.1□□□□□ -0.31
NUP98-219ENST00000532475 ARHGEF5Q12774 1597 aa13.1□□□□□ -0.31
NUP98-219ENST00000532475 MAPK8IP2Q13387 824 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 202.3 ms