RNA–Protein interactions for RNA: ENST00000532475.1

NUP98-219, Transcript of nucleoporin 98, humanhuman

TSL 4

Gene NUP98, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-219ENST00000532475 NISCHQ9Y2I1 1504 aa20.99■□□□□ 0.95
NUP98-219ENST00000532475 CHIC1Q5VXU3 224 aa19.47■□□□□ 0.71
NUP98-219ENST00000532475 ABCC9O60706 1549 aa19.45■□□□□ 0.7
NUP98-219ENST00000532475 CCDC180Q9P1Z9 1646 aa18.82■□□□□ 0.6
NUP98-219ENST00000532475 DNAJC5BQ9UF47 199 aa18.77■□□□□ 0.6
NUP98-219ENST00000532475 AEBP2Q6ZN18 517 aaPredicted RBP18.64■□□□□ 0.57
NUP98-219ENST00000532475 RB1CC1Q8TDY2 1594 aa18.18■□□□□ 0.5
NUP98-219ENST00000532475 PABPN1Q86U42 306 aaKnown RBP eCLIP18.18■□□□□ 0.5
NUP98-219ENST00000532475 DCAF8L2P0C7V8 631 aa18.11■□□□□ 0.49
NUP98-219ENST00000532475 NACADO15069 1562 aa17.98■□□□□ 0.47
NUP98-219ENST00000532475 UNC13AQ9UPW8 1703 aa17.75■□□□□ 0.43
NUP98-219ENST00000532475 BICRAQ9NZM4 1560 aa17.74■□□□□ 0.43
NUP98-219ENST00000532475 MYO15BQ96JP2 1530 aa17.58■□□□□ 0.41
NUP98-219ENST00000532475 CECR2Q9BXF3 1484 aa17.53■□□□□ 0.4
NUP98-219ENST00000532475 CC2D2AQ9P2K1 1620 aa17.47■□□□□ 0.39
NUP98-219ENST00000532475 DNAJC5Q9H3Z4 198 aa17.43■□□□□ 0.38
NUP98-219ENST00000532475 EIF4G1Q04637 1599 aaKnown RBP17.32■□□□□ 0.36
NUP98-219ENST00000532475 SHROOM4Q9ULL8 1493 aa17.31■□□□□ 0.36
NUP98-219ENST00000532475 ZCCHC6Q5VYS8 1495 aaKnown RBP17.27■□□□□ 0.36
NUP98-219ENST00000532475 SCRIBQ14160 1630 aa17.26■□□□□ 0.35
NUP98-219ENST00000532475 DCAF1Q9Y4B6 1507 aa17.22■□□□□ 0.35
NUP98-219ENST00000532475 PHF23Q9BUL5 403 aaPredicted RBP17.18■□□□□ 0.34
NUP98-219ENST00000532475 CUX2O14529 1486 aa16.8■□□□□ 0.28
NUP98-219ENST00000532475 ERCC6Q03468 1493 aa16.75■□□□□ 0.27
NUP98-219ENST00000532475 NCAPD3P42695 1498 aa16.7■□□□□ 0.26
NUP98-219ENST00000532475 NESP48681 1621 aa16.61■□□□□ 0.25
NUP98-219ENST00000532475 ATAD2BQ9ULI0 1458 aa16.6■□□□□ 0.25
NUP98-219ENST00000532475 TRIM41Q8WV44 630 aa16.53■□□□□ 0.24
NUP98-219ENST00000532475 SMARCA2P51531 1590 aa16.43■□□□□ 0.22
NUP98-219ENST00000532475 HMGXB3Q12766 1538 aa16.42■□□□□ 0.22
NUP98-219ENST00000532475 PLPPR3Q6T4P5 718 aa16.42■□□□□ 0.22
NUP98-219ENST00000532475 SMARCA4P51532 1647 aa16.4■□□□□ 0.22
NUP98-219ENST00000532475 BAZ1BQ9UIG0 1483 aaKnown RBP16.37■□□□□ 0.21
NUP98-219ENST00000532475 THOC2Q8NI27 1593 aaKnown RBP16.36■□□□□ 0.21
NUP98-219ENST00000532475 PDS5BQ9NTI5 1447 aa16.28■□□□□ 0.2
NUP98-219ENST00000532475 LAMC3Q9Y6N6 1575 aa16.27■□□□□ 0.2
NUP98-219ENST00000532475 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
NUP98-219ENST00000532475 KIF21AQ7Z4S6 1674 aa16.23■□□□□ 0.19
NUP98-219ENST00000532475 PEG3Q9GZU2 1588 aa16.22■□□□□ 0.19
NUP98-219ENST00000532475 MROH2BQ7Z745 1585 aa16.21■□□□□ 0.18
NUP98-219ENST00000532475 EHMT2Q96KQ7 1210 aa16.2■□□□□ 0.18
NUP98-219ENST00000532475 CADPSQ9ULU8 1353 aa16.2■□□□□ 0.18
NUP98-219ENST00000532475 OSCARQ8IYS5 282 aa16.14■□□□□ 0.17
NUP98-219ENST00000532475 MRC2Q9UBG0 1479 aa16.14■□□□□ 0.17
NUP98-219ENST00000532475 WDR62O43379 1518 aa16.08■□□□□ 0.16
NUP98-219ENST00000532475 FANCD2Q9BXW9 1451 aa15.98■□□□□ 0.15
NUP98-219ENST00000532475 CEP164Q9UPV0 1460 aa15.98■□□□□ 0.15
NUP98-219ENST00000532475 WIZO95785 1651 aa15.95■□□□□ 0.14
NUP98-219ENST00000532475 CFTRP13569 1480 aa15.9■□□□□ 0.14
NUP98-219ENST00000532475 URB2Q14146 1524 aaKnown RBP15.89■□□□□ 0.13
NUP98-219ENST00000532475 CYB5RLQ6IPT4 315 aa15.84■□□□□ 0.13
NUP98-219ENST00000532475 RIMBP3CA6NJZ7 1639 aa15.82■□□□□ 0.12
NUP98-219ENST00000532475 RIMBP3BA6NNM3 1639 aa15.82■□□□□ 0.12
NUP98-219ENST00000532475 RIMBP3Q9UFD9 1639 aa15.82■□□□□ 0.12
NUP98-219ENST00000532475 ZNF608Q9ULD9 1512 aaPredicted RBP15.79■□□□□ 0.12
NUP98-219ENST00000532475 RSF1Q96T23 1441 aaPredicted RBP15.77■□□□□ 0.11
NUP98-219ENST00000532475 TRHP20396 242 aaPredicted RBP15.76■□□□□ 0.11
NUP98-219ENST00000532475 ARHGEF11O15085 1522 aa15.76■□□□□ 0.11
NUP98-219ENST00000532475 SENP3Q9H4L4 574 aaPredicted RBP15.74■□□□□ 0.11
NUP98-219ENST00000532475 IFT140Q96RY7 1462 aa15.7■□□□□ 0.1
NUP98-219ENST00000532475 TOP2AP11388 1531 aaKnown RBP15.67■□□□□ 0.1
NUP98-219ENST00000532475 FBLN2P98095 1184 aa15.66■□□□□ 0.1
NUP98-219ENST00000532475 KCNA4P22459 653 aa15.64■□□□□ 0.09
NUP98-219ENST00000532475 AQRO60306 1485 aaKnown RBP eCLIP15.64■□□□□ 0.092e-6■■■■□ 21.1
NUP98-219ENST00000532475 TOPBP1Q92547 1522 aa15.63■□□□□ 0.09
NUP98-219ENST00000532475 CCDC88BA6NC98 1476 aa15.62■□□□□ 0.09
NUP98-219ENST00000532475 ARAP1Q96P48 1450 aa15.6■□□□□ 0.09
NUP98-219ENST00000532475 EIF4G3O43432 1585 aaKnown RBP15.54■□□□□ 0.08
NUP98-219ENST00000532475 TDRD9Q8NDG6 1382 aaKnown RBP15.5■□□□□ 0.07
NUP98-219ENST00000532475 ABCC8Q09428 1581 aa15.5■□□□□ 0.07
NUP98-219ENST00000532475 CHD1O14646 1710 aa15.48■□□□□ 0.07
NUP98-219ENST00000532475 RAD54L2Q9Y4B4 1467 aa15.47■□□□□ 0.07
NUP98-219ENST00000532475 TARBP1Q13395 1621 aaKnown RBP15.47■□□□□ 0.07
NUP98-219ENST00000532475 PRDM2Q13029 1718 aa15.47■□□□□ 0.07
NUP98-219ENST00000532475 DNMBPQ6XZF7 1577 aa15.46■□□□□ 0.07
NUP98-219ENST00000532475 POLA1P09884 1462 aaPredicted RBP15.45■□□□□ 0.06
NUP98-219ENST00000532475 SLC24A1O60721 1099 aa15.44■□□□□ 0.06
NUP98-219ENST00000532475 CHMP7Q8WUX9 453 aaPredicted RBP15.44■□□□□ 0.06
NUP98-219ENST00000532475 SOGA1O94964 1423 aa15.43■□□□□ 0.06
NUP98-219ENST00000532475 SNAPC4Q5SXM2 1469 aa15.37■□□□□ 0.05
NUP98-219ENST00000532475 CLASP1Q7Z460 1538 aa15.34■□□□□ 0.05
NUP98-219ENST00000532475 FGD5Q6ZNL6 1462 aa15.3■□□□□ 0.04
NUP98-219ENST00000532475 CSRNP3Q8WYN3 585 aa15.3■□□□□ 0.04
NUP98-219ENST00000532475 GAPVD1Q14C86 1478 aa15.27■□□□□ 0.04
NUP98-219ENST00000532475 GRIN2BQ13224 1484 aa15.27■□□□□ 0.03
NUP98-219ENST00000532475 MAGI1Q96QZ7 1491 aaPredicted RBP15.27■□□□□ 0.03
NUP98-219ENST00000532475 SYNJ1O43426 1573 aa15.26■□□□□ 0.03
NUP98-219ENST00000532475 SYNJ2O15056 1496 aa15.26■□□□□ 0.03
NUP98-219ENST00000532475 ADRA2BP18089 450 aa15.23■□□□□ 0.03
NUP98-219ENST00000532475 CUX1P39880 1505 aa15.22■□□□□ 0.03
NUP98-219ENST00000532475 SLC4A1APQ9BWU0 796 aaKnown RBP15.18■□□□□ 0.02
NUP98-219ENST00000532475 ERCC6L2Q5T890 1561 aa15.17■□□□□ 0.02
NUP98-219ENST00000532475 WDR97A6NE52 1622 aa15.16■□□□□ 0.02
NUP98-219ENST00000532475 ABCA10Q8WWZ4 1543 aa15.07■□□□□ 0
NUP98-219ENST00000532475 GRIN2AQ12879 1464 aa15.07■□□□□ 0
NUP98-219ENST00000532475 PBRM1Q86U86 1689 aa15.06■□□□□ 0
NUP98-219ENST00000532475 CEP170Q5SW79 1584 aa15.04■□□□□ -0
NUP98-219ENST00000532475 NUP160Q12769 1436 aa15.04■□□□□ -0
NUP98-219ENST00000532475 FAM69CQ0P6D2 419 aa15.04■□□□□ -0
NUP98-219ENST00000532475 ABCA5Q8WWZ7 1642 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms