RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 ZNF335Q9H4Z2 1342 aaPredicted RBP14.79□□□□□ -0.04
VPS26B-207ENST00000532160 DNMT1P26358 1616 aaKnown RBP14.78□□□□□ -0.04
VPS26B-207ENST00000532160 A2ML1A8K2U0 1454 aa14.78□□□□□ -0.04
VPS26B-207ENST00000532160 PKD2Q13563 968 aa14.78□□□□□ -0.04
VPS26B-207ENST00000532160 KIF3BO15066 747 aa14.77□□□□□ -0.05
VPS26B-207ENST00000532160 KDM5DQ9BY66 1539 aa14.76□□□□□ -0.05
VPS26B-207ENST00000532160 DISP3Q9P2K9 1392 aa14.76□□□□□ -0.05
VPS26B-207ENST00000532160 FBXO31Q5XUX0 539 aaPredicted RBP14.76□□□□□ -0.05
VPS26B-207ENST00000532160 ARHGEF5Q12774 1597 aa14.76□□□□□ -0.05
VPS26B-207ENST00000532160 PZPP20742 1482 aa14.75□□□□□ -0.05
VPS26B-207ENST00000532160 LRRC9Q6ZRR7 1453 aa14.75□□□□□ -0.05
VPS26B-207ENST00000532160 VPS8Q8N3P4 1428 aa14.75□□□□□ -0.05
VPS26B-207ENST00000532160 TNRQ92752 1358 aa14.74□□□□□ -0.05
VPS26B-207ENST00000532160 FAM135AQ9P2D6 1515 aa14.74□□□□□ -0.05
VPS26B-207ENST00000532160 POLR1AO95602 1720 aaPredicted RBP14.73□□□□□ -0.05
VPS26B-207ENST00000532160 RSPH4AQ5TD94 716 aa14.73□□□□□ -0.05
VPS26B-207ENST00000532160 ILDR2Q71H61 639 aa14.73□□□□□ -0.05
VPS26B-207ENST00000532160 SPATA31D1Q6ZQQ2 1576 aa14.73□□□□□ -0.05
VPS26B-207ENST00000532160 NEURL4Q96JN8 1562 aa14.73□□□□□ -0.05
VPS26B-207ENST00000532160 WASHC2CQ9Y4E1 1318 aa14.71□□□□□ -0.05
VPS26B-207ENST00000532160 RNF17Q9BXT8 1623 aaKnown RBP14.7□□□□□ -0.06
VPS26B-207ENST00000532160 UBAP1LF5GYI3 381 aa14.7□□□□□ -0.06
VPS26B-207ENST00000532160 TSPY4P0CV99 314 aa14.7□□□□□ -0.06
VPS26B-207ENST00000532160 TSPY10P0CW01 314 aa14.7□□□□□ -0.06
VPS26B-207ENST00000532160 KANK4Q5T7N3 995 aaPredicted RBP14.7□□□□□ -0.06
VPS26B-207ENST00000532160 MAST1Q9Y2H9 1570 aa14.69□□□□□ -0.06
VPS26B-207ENST00000532160 MIA2Q96PC5 1412 aa14.68□□□□□ -0.06
VPS26B-207ENST00000532160 ABCC3O15438 1527 aa14.67□□□□□ -0.06
VPS26B-207ENST00000532160 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.67□□□□□ -0.06
VPS26B-207ENST00000532160 MAP3K1Q13233 1512 aa14.66□□□□□ -0.06
VPS26B-207ENST00000532160 MROH1Q8NDA8 1641 aa14.66□□□□□ -0.06
VPS26B-207ENST00000532160 NLRP1Q9C000 1473 aa14.66□□□□□ -0.06
VPS26B-207ENST00000532160 EIF2AK4Q9P2K8 1649 aaKnown RBP14.66□□□□□ -0.06
VPS26B-207ENST00000532160 MYOM3Q5VTT5 1437 aa14.66□□□□□ -0.06
VPS26B-207ENST00000532160 ZC3H13Q5T200 1668 aaKnown RBP14.65□□□□□ -0.06
VPS26B-207ENST00000532160 UGGT1Q9NYU2 1555 aa14.65□□□□□ -0.06
VPS26B-207ENST00000532160 CFAP65Q6ZU64 1925 aaKnown RBP14.64□□□□□ -0.07
VPS26B-207ENST00000532160 CEP152O94986 1710 aa14.64□□□□□ -0.07
VPS26B-207ENST00000532160 VWDEQ8N2E2 1590 aa14.64□□□□□ -0.07
VPS26B-207ENST00000532160 SHANK2Q9UPX8 1470 aa14.63□□□□□ -0.07
VPS26B-207ENST00000532160 CPS1P31327 1500 aa14.63□□□□□ -0.07
VPS26B-207ENST00000532160 ERVK-7P63135 1459 aa14.63□□□□□ -0.07
VPS26B-207ENST00000532160 DEPDC5O75140 1603 aa14.63□□□□□ -0.07
VPS26B-207ENST00000532160 ANKLE2Q86XL3 938 aa14.62□□□□□ -0.07
VPS26B-207ENST00000532160 THEMISQ8N1K5 641 aaPredicted RBP14.62□□□□□ -0.07
VPS26B-207ENST00000532160 MED14O60244 1454 aa14.62□□□□□ -0.07
VPS26B-207ENST00000532160 NPHP4O75161 1426 aaPredicted RBP14.61□□□□□ -0.07
VPS26B-207ENST00000532160 SOCS7O14512 581 aa14.61□□□□□ -0.07
VPS26B-207ENST00000532160 IQGAP1P46940 1657 aa14.61□□□□□ -0.07
VPS26B-207ENST00000532160 DUOX2Q9NRD8 1548 aa14.61□□□□□ -0.07
VPS26B-207ENST00000532160 CROCC2H7BZ55 1655 aa14.6□□□□□ -0.07
VPS26B-207ENST00000532160 STRCP1A6NGW2 1772 aa14.58□□□□□ -0.08
VPS26B-207ENST00000532160 PIP4K2BP78356 416 aa14.58□□□□□ -0.08
VPS26B-207ENST00000532160 APLP2Q06481 763 aa14.58□□□□□ -0.08
VPS26B-207ENST00000532160 SCAF1Q9H7N4 1312 aaKnown RBP14.58□□□□□ -0.08
VPS26B-207ENST00000532160 PTPN23Q9H3S7 1636 aa14.58□□□□□ -0.08
VPS26B-207ENST00000532160 KIF15Q9NS87 1388 aa14.58□□□□□ -0.08
VPS26B-207ENST00000532160 UBR1Q8IWV7 1749 aa14.58□□□□□ -0.08
VPS26B-207ENST00000532160 ABCC5O15440 1437 aa14.58□□□□□ -0.08
VPS26B-207ENST00000532160 PRDM15P57071 1507 aaPredicted RBP14.57□□□□□ -0.08
VPS26B-207ENST00000532160 ALKQ9UM73 1620 aa14.57□□□□□ -0.08
VPS26B-207ENST00000532160 PPARGC1BQ86YN6 1023 aaKnown RBP14.57□□□□□ -0.08
VPS26B-207ENST00000532160 HSPA1LP34931 641 aa14.56□□□□□ -0.08
VPS26B-207ENST00000532160 TOM1O60784 492 aa14.54□□□□□ -0.08
VPS26B-207ENST00000532160 RRP7BPQ9NSQ0 103 aa14.54□□□□□ -0.08
VPS26B-207ENST00000532160 ERBINQ96RT1 1412 aa14.54□□□□□ -0.08
VPS26B-207ENST00000532160 DAPK1P53355 1430 aa14.53□□□□□ -0.08
VPS26B-207ENST00000532160 ARHGAP31Q2M1Z3 1444 aa14.53□□□□□ -0.08
VPS26B-207ENST00000532160 LRRC7Q96NW7 1537 aa14.52□□□□□ -0.08
VPS26B-207ENST00000532160 FGD6Q6ZV73 1430 aa14.52□□□□□ -0.08
VPS26B-207ENST00000532160 SYNMO15061 1565 aa14.51□□□□□ -0.09
VPS26B-207ENST00000532160 MED1Q15648 1581 aaPredicted RBP14.51□□□□□ -0.09
VPS26B-207ENST00000532160 SCAF11Q99590 1463 aaKnown RBP14.51□□□□□ -0.09
VPS26B-207ENST00000532160 ARHGAP23Q9P227 1491 aa14.51□□□□□ -0.09
VPS26B-207ENST00000532160 LTKP29376 864 aa14.51□□□□□ -0.09
VPS26B-207ENST00000532160 SLIT1O75093 1534 aa14.51□□□□□ -0.09
VPS26B-207ENST00000532160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.5□□□□□ -0.09
VPS26B-207ENST00000532160 PIK3C2BO00750 1634 aa14.5□□□□□ -0.09
VPS26B-207ENST00000532160 CHIC2Q9UKJ5 165 aa14.48□□□□□ -0.09
VPS26B-207ENST00000532160 TXNDC2Q86VQ3 553 aa14.47□□□□□ -0.09
VPS26B-207ENST00000532160 LMTK2Q8IWU2 1503 aa14.46□□□□□ -0.09
VPS26B-207ENST00000532160 XIRP1Q702N8 1843 aaKnown RBP14.46□□□□□ -0.09
VPS26B-207ENST00000532160 KANK1Q14678 1352 aa14.46□□□□□ -0.1
VPS26B-207ENST00000532160 ANKRD30AQ9BXX3 1397 aa14.46□□□□□ -0.1
VPS26B-207ENST00000532160 TMEM2Q9UHN6 1383 aa14.45□□□□□ -0.1
VPS26B-207ENST00000532160 EFCAB6Q5THR3 1501 aa14.44□□□□□ -0.1
VPS26B-207ENST00000532160 KDM5AP29375 1690 aaKnown RBP14.43□□□□□ -0.1
VPS26B-207ENST00000532160 IDI1Q13907 227 aa14.43□□□□□ -0.1
VPS26B-207ENST00000532160 EID1Q9Y6B2 187 aa14.43□□□□□ -0.1
VPS26B-207ENST00000532160 ADGRL2O95490 1459 aa14.43□□□□□ -0.1
VPS26B-207ENST00000532160 STAG3Q9UJ98 1225 aa14.41□□□□□ -0.1
VPS26B-207ENST00000532160 NOS1P29475 1434 aa14.41□□□□□ -0.1
VPS26B-207ENST00000532160 ADGRB3O60242 1522 aa14.4□□□□□ -0.1
VPS26B-207ENST00000532160 POTEDQ86YR6 584 aa14.39□□□□□ -0.11
VPS26B-207ENST00000532160 TET3O43151 1660 aa14.39□□□□□ -0.11
VPS26B-207ENST00000532160 FAM50AQ14320 339 aaKnown RBP14.38□□□□□ -0.11
VPS26B-207ENST00000532160 MYO5BQ9ULV0 1848 aa14.38□□□□□ -0.11
VPS26B-207ENST00000532160 ANKRD50Q9ULJ7 1429 aa14.37□□□□□ -0.11
VPS26B-207ENST00000532160 SLC26A8Q96RN1 970 aa14.36□□□□□ -0.11
VPS26B-207ENST00000532160 TMEM94Q12767 1356 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms