RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 NISCHQ9Y2I1 1504 aa23.35■■□□□ 1.33
VPS26B-207ENST00000532160 ABCC9O60706 1549 aa21.05■□□□□ 0.96
VPS26B-207ENST00000532160 CCDC180Q9P1Z9 1646 aa20.97■□□□□ 0.95
VPS26B-207ENST00000532160 AEBP2Q6ZN18 517 aaPredicted RBP20.48■□□□□ 0.87
VPS26B-207ENST00000532160 RB1CC1Q8TDY2 1594 aa19.98■□□□□ 0.79
VPS26B-207ENST00000532160 NACADO15069 1562 aa19.83■□□□□ 0.77
VPS26B-207ENST00000532160 DNAJC5BQ9UF47 199 aa19.81■□□□□ 0.76
VPS26B-207ENST00000532160 DCAF8L2P0C7V8 631 aa19.71■□□□□ 0.75
VPS26B-207ENST00000532160 UNC13AQ9UPW8 1703 aa19.6■□□□□ 0.73
VPS26B-207ENST00000532160 PABPN1Q86U42 306 aaKnown RBP eCLIP19.59■□□□□ 0.73
VPS26B-207ENST00000532160 CHIC1Q5VXU3 224 aa19.55■□□□□ 0.72
VPS26B-207ENST00000532160 MYO15BQ96JP2 1530 aa19.52■□□□□ 0.72
VPS26B-207ENST00000532160 BICRAQ9NZM4 1560 aa19.45■□□□□ 0.7
VPS26B-207ENST00000532160 ZCCHC6Q5VYS8 1495 aaKnown RBP19.35■□□□□ 0.69
VPS26B-207ENST00000532160 DCAF1Q9Y4B6 1507 aa19.26■□□□□ 0.67
VPS26B-207ENST00000532160 SCRIBQ14160 1630 aa19.15■□□□□ 0.66
VPS26B-207ENST00000532160 SHROOM4Q9ULL8 1493 aa19.11■□□□□ 0.65
VPS26B-207ENST00000532160 CC2D2AQ9P2K1 1620 aa19.02■□□□□ 0.64
VPS26B-207ENST00000532160 EIF4G1Q04637 1599 aaKnown RBP18.96■□□□□ 0.63
VPS26B-207ENST00000532160 CECR2Q9BXF3 1484 aa18.96■□□□□ 0.63
VPS26B-207ENST00000532160 NCAPD3P42695 1498 aa18.31■□□□□ 0.52
VPS26B-207ENST00000532160 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
VPS26B-207ENST00000532160 SMARCA4P51532 1647 aa18.25■□□□□ 0.51
VPS26B-207ENST00000532160 SMARCA2P51531 1590 aa18.19■□□□□ 0.5
VPS26B-207ENST00000532160 DNAJC5Q9H3Z4 198 aa18.19■□□□□ 0.5
VPS26B-207ENST00000532160 HMGXB3Q12766 1538 aa18.18■□□□□ 0.5
VPS26B-207ENST00000532160 ERCC6Q03468 1493 aa18.16■□□□□ 0.5
VPS26B-207ENST00000532160 CUX2O14529 1486 aa18.14■□□□□ 0.5
VPS26B-207ENST00000532160 BAZ1AQ9NRL2 1556 aaPredicted RBP18.12■□□□□ 0.49
VPS26B-207ENST00000532160 NESP48681 1621 aa18.09■□□□□ 0.49
VPS26B-207ENST00000532160 BAZ1BQ9UIG0 1483 aaKnown RBP18.07■□□□□ 0.48
VPS26B-207ENST00000532160 PEG3Q9GZU2 1588 aa18.05■□□□□ 0.48
VPS26B-207ENST00000532160 MROH2BQ7Z745 1585 aa18.01■□□□□ 0.47
VPS26B-207ENST00000532160 THOC2Q8NI27 1593 aaKnown RBP17.91■□□□□ 0.46
VPS26B-207ENST00000532160 LAMC3Q9Y6N6 1575 aa17.91■□□□□ 0.46
VPS26B-207ENST00000532160 KIF21AQ7Z4S6 1674 aa17.86■□□□□ 0.45
VPS26B-207ENST00000532160 WIZO95785 1651 aa17.8■□□□□ 0.44
VPS26B-207ENST00000532160 PDS5BQ9NTI5 1447 aa17.79■□□□□ 0.44
VPS26B-207ENST00000532160 CADPSQ9ULU8 1353 aa17.75■□□□□ 0.43
VPS26B-207ENST00000532160 MRC2Q9UBG0 1479 aa17.67■□□□□ 0.42
VPS26B-207ENST00000532160 WDR62O43379 1518 aa17.64■□□□□ 0.41
VPS26B-207ENST00000532160 RSF1Q96T23 1441 aaPredicted RBP17.6■□□□□ 0.41
VPS26B-207ENST00000532160 CEP164Q9UPV0 1460 aa17.58■□□□□ 0.41
VPS26B-207ENST00000532160 FANCD2Q9BXW9 1451 aa17.56■□□□□ 0.4
VPS26B-207ENST00000532160 TOP2AP11388 1531 aaKnown RBP17.55■□□□□ 0.4
VPS26B-207ENST00000532160 CFTRP13569 1480 aa17.55■□□□□ 0.4
VPS26B-207ENST00000532160 URB2Q14146 1524 aaKnown RBP17.44■□□□□ 0.38
VPS26B-207ENST00000532160 PRDM2Q13029 1718 aa17.39■□□□□ 0.37
VPS26B-207ENST00000532160 TRIM41Q8WV44 630 aa17.39■□□□□ 0.37
VPS26B-207ENST00000532160 CCDC88BA6NC98 1476 aa17.36■□□□□ 0.37
VPS26B-207ENST00000532160 SENP3Q9H4L4 574 aaPredicted RBP17.3■□□□□ 0.36
VPS26B-207ENST00000532160 OSCARQ8IYS5 282 aa17.28■□□□□ 0.36
VPS26B-207ENST00000532160 ZNF608Q9ULD9 1512 aaPredicted RBP17.25■□□□□ 0.35
VPS26B-207ENST00000532160 TOPBP1Q92547 1522 aa17.23■□□□□ 0.35
VPS26B-207ENST00000532160 PHF23Q9BUL5 403 aaPredicted RBP17.23■□□□□ 0.35
VPS26B-207ENST00000532160 IFT140Q96RY7 1462 aa17.22■□□□□ 0.35
VPS26B-207ENST00000532160 DNMBPQ6XZF7 1577 aa17.16■□□□□ 0.34
VPS26B-207ENST00000532160 EIF4G3O43432 1585 aaKnown RBP17.15■□□□□ 0.34
VPS26B-207ENST00000532160 ABCC8Q09428 1581 aa17.13■□□□□ 0.33
VPS26B-207ENST00000532160 RIMBP3CA6NJZ7 1639 aa17.12■□□□□ 0.33
VPS26B-207ENST00000532160 RIMBP3BA6NNM3 1639 aa17.12■□□□□ 0.33
VPS26B-207ENST00000532160 RIMBP3Q9UFD9 1639 aa17.12■□□□□ 0.33
VPS26B-207ENST00000532160 TARBP1Q13395 1621 aaKnown RBP17.09■□□□□ 0.33
VPS26B-207ENST00000532160 AQRO60306 1485 aaKnown RBP eCLIP17.06■□□□□ 0.322e-9■■■■■ 39.4
VPS26B-207ENST00000532160 ARHGEF11O15085 1522 aa17.06■□□□□ 0.32
VPS26B-207ENST00000532160 POLA1P09884 1462 aaPredicted RBP17.05■□□□□ 0.32
VPS26B-207ENST00000532160 CHD1O14646 1710 aa17.04■□□□□ 0.32
VPS26B-207ENST00000532160 RAD54L2Q9Y4B4 1467 aa17■□□□□ 0.31
VPS26B-207ENST00000532160 SOGA1O94964 1423 aa16.95■□□□□ 0.3
VPS26B-207ENST00000532160 FGD5Q6ZNL6 1462 aa16.94■□□□□ 0.3
VPS26B-207ENST00000532160 TDRD9Q8NDG6 1382 aaKnown RBP16.94■□□□□ 0.3
VPS26B-207ENST00000532160 CUX1P39880 1505 aa16.93■□□□□ 0.3
VPS26B-207ENST00000532160 FBLN2P98095 1184 aa16.93■□□□□ 0.3
VPS26B-207ENST00000532160 CYB5RLQ6IPT4 315 aa16.9■□□□□ 0.3
VPS26B-207ENST00000532160 SNAPC4Q5SXM2 1469 aa16.9■□□□□ 0.3
VPS26B-207ENST00000532160 ARAP1Q96P48 1450 aa16.89■□□□□ 0.29
VPS26B-207ENST00000532160 WDR97A6NE52 1622 aa16.88■□□□□ 0.29
VPS26B-207ENST00000532160 CLASP1Q7Z460 1538 aa16.82■□□□□ 0.28
VPS26B-207ENST00000532160 MAGI1Q96QZ7 1491 aaPredicted RBP16.82■□□□□ 0.28
VPS26B-207ENST00000532160 GRIN2BQ13224 1484 aa16.81■□□□□ 0.28
VPS26B-207ENST00000532160 SUPT5HO00267 1087 aaKnown RBP16.79■□□□□ 0.28
VPS26B-207ENST00000532160 CHMP7Q8WUX9 453 aaPredicted RBP16.79■□□□□ 0.28
VPS26B-207ENST00000532160 PBRM1Q86U86 1689 aa16.78■□□□□ 0.28
VPS26B-207ENST00000532160 SYNJ1O43426 1573 aa16.78■□□□□ 0.28
VPS26B-207ENST00000532160 SYNJ2O15056 1496 aa16.77■□□□□ 0.28
VPS26B-207ENST00000532160 GAPVD1Q14C86 1478 aa16.76■□□□□ 0.27
VPS26B-207ENST00000532160 ABCA5Q8WWZ7 1642 aa16.74■□□□□ 0.27
VPS26B-207ENST00000532160 ABCA10Q8WWZ4 1543 aa16.73■□□□□ 0.27
VPS26B-207ENST00000532160 TRHP20396 242 aaPredicted RBP16.72■□□□□ 0.27
VPS26B-207ENST00000532160 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
VPS26B-207ENST00000532160 WRNQ14191 1432 aaPredicted RBP eCLIP16.63■□□□□ 0.25
VPS26B-207ENST00000532160 TOP2BQ02880 1626 aa16.63■□□□□ 0.25
VPS26B-207ENST00000532160 ADAMTS12P58397 1594 aa16.62■□□□□ 0.25
VPS26B-207ENST00000532160 GRIN2AQ12879 1464 aa16.61■□□□□ 0.25
VPS26B-207ENST00000532160 ERCC6L2Q5T890 1561 aa16.59■□□□□ 0.25
VPS26B-207ENST00000532160 CEP170Q5SW79 1584 aa16.57■□□□□ 0.24
VPS26B-207ENST00000532160 NUP160Q12769 1436 aa16.56■□□□□ 0.24
VPS26B-207ENST00000532160 FHAD1B1AJZ9 1412 aa16.53■□□□□ 0.24
VPS26B-207ENST00000532160 ERICH3Q5RHP9 1530 aa16.51■□□□□ 0.23
VPS26B-207ENST00000532160 SHROOM2Q13796 1616 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms