RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 CAMSAP2Q08AD1 1489 aa24.22■■□□□ 1.47
DEPDC7-204ENST00000532078 VPS8Q8N3P4 1428 aa24.22■■□□□ 1.47
DEPDC7-204ENST00000532078 CCDC141Q6ZP82 1450 aa24.21■■□□□ 1.47
DEPDC7-204ENST00000532078 FOXD4L1Q9NU39 408 aa24.21■■□□□ 1.47
DEPDC7-204ENST00000532078 CACNB1Q02641 598 aaPredicted RBP24.2■■□□□ 1.46
DEPDC7-204ENST00000532078 PTPRTO14522 1441 aa24.19■■□□□ 1.46
DEPDC7-204ENST00000532078 NCOA1Q15788 1441 aa24.18■■□□□ 1.46
DEPDC7-204ENST00000532078 GGT6Q6P531 493 aa24.17■■□□□ 1.46
DEPDC7-204ENST00000532078 MYO3AQ8NEV4 1616 aa24.17■■□□□ 1.46
DEPDC7-204ENST00000532078 ZNF142P52746 1687 aaPredicted RBP24.16■■□□□ 1.46
DEPDC7-204ENST00000532078 LRRC9Q6ZRR7 1453 aa24.15■■□□□ 1.46
DEPDC7-204ENST00000532078 ARHGEF5Q12774 1597 aa24.15■■□□□ 1.46
DEPDC7-204ENST00000532078 DHX29Q7Z478 1369 aaKnown RBP24.15■■□□□ 1.46
DEPDC7-204ENST00000532078 PTPRKQ15262 1439 aa24.14■■□□□ 1.45
DEPDC7-204ENST00000532078 CAMSAP1Q5T5Y3 1602 aa24.13■■□□□ 1.45
DEPDC7-204ENST00000532078 RSPH4AQ5TD94 716 aa24.13■■□□□ 1.45
DEPDC7-204ENST00000532078 LOC105371045A0A1W2PR82 267 aa24.12■■□□□ 1.45
DEPDC7-204ENST00000532078 FAM135AQ9P2D6 1515 aa24.11■■□□□ 1.45
DEPDC7-204ENST00000532078 CEP170BQ9Y4F5 1589 aaPredicted RBP24.11■■□□□ 1.45
DEPDC7-204ENST00000532078 MAP3K1Q13233 1512 aa24.1■■□□□ 1.45
DEPDC7-204ENST00000532078 KDM5DQ9BY66 1539 aa24.07■■□□□ 1.44
DEPDC7-204ENST00000532078 PLA2R1Q13018 1463 aa24.07■■□□□ 1.44
DEPDC7-204ENST00000532078 KIF3BO15066 747 aa24.05■■□□□ 1.44
DEPDC7-204ENST00000532078 LTBP4Q8N2S1 1624 aa24.03■■□□□ 1.44
DEPDC7-204ENST00000532078 ZBTB22O15209 634 aa24.03■■□□□ 1.44
DEPDC7-204ENST00000532078 MYCNP04198 464 aaPredicted RBP24.03■■□□□ 1.44
DEPDC7-204ENST00000532078 TSPY4P0CV99 314 aa24.03■■□□□ 1.44
DEPDC7-204ENST00000532078 TSPY10P0CW01 314 aa24.03■■□□□ 1.44
DEPDC7-204ENST00000532078 MAST1Q9Y2H9 1570 aa24.03■■□□□ 1.44
DEPDC7-204ENST00000532078 MYOM3Q5VTT5 1437 aa24.01■■□□□ 1.43
DEPDC7-204ENST00000532078 A2ML1A8K2U0 1454 aa24.01■■□□□ 1.43
DEPDC7-204ENST00000532078 MIA2Q96PC5 1412 aa24.01■■□□□ 1.43
DEPDC7-204ENST00000532078 PZPP20742 1482 aa24■■□□□ 1.43
DEPDC7-204ENST00000532078 TCOF1Q13428 1488 aaKnown RBP24■■□□□ 1.43
DEPDC7-204ENST00000532078 PKD2Q13563 968 aa23.99■■□□□ 1.43
DEPDC7-204ENST00000532078 IQSEC2Q5JU85 1478 aa23.99■■□□□ 1.43
DEPDC7-204ENST00000532078 KANK4Q5T7N3 995 aaPredicted RBP23.98■■□□□ 1.43
DEPDC7-204ENST00000532078 NCKAP5LQ9HCH0 1330 aa23.98■■□□□ 1.43
DEPDC7-204ENST00000532078 RNF17Q9BXT8 1623 aaKnown RBP23.98■■□□□ 1.43
DEPDC7-204ENST00000532078 DNMT1P26358 1616 aaKnown RBP23.97■■□□□ 1.43
DEPDC7-204ENST00000532078 TNRQ92752 1358 aa23.97■■□□□ 1.43
DEPDC7-204ENST00000532078 WASHC2CQ9Y4E1 1318 aa23.97■■□□□ 1.43
DEPDC7-204ENST00000532078 EIF2AK4Q9P2K8 1649 aaKnown RBP23.95■■□□□ 1.43
DEPDC7-204ENST00000532078 ZC3H13Q5T200 1668 aaKnown RBP23.94■■□□□ 1.42
DEPDC7-204ENST00000532078 FBXO31Q5XUX0 539 aaPredicted RBP23.91■■□□□ 1.42
DEPDC7-204ENST00000532078 POLR1AO95602 1720 aaPredicted RBP23.9■■□□□ 1.42
DEPDC7-204ENST00000532078 NLRP1Q9C000 1473 aa23.89■■□□□ 1.42
DEPDC7-204ENST00000532078 APLP2Q06481 763 aa23.89■■□□□ 1.41
DEPDC7-204ENST00000532078 ABCC3O15438 1527 aa23.89■■□□□ 1.41
DEPDC7-204ENST00000532078 ZNF335Q9H4Z2 1342 aaPredicted RBP23.88■■□□□ 1.41
DEPDC7-204ENST00000532078 CROCC2H7BZ55 1655 aa23.88■■□□□ 1.41
DEPDC7-204ENST00000532078 SAMD1Q6SPF0 538 aaPredicted RBP23.87■■□□□ 1.41
DEPDC7-204ENST00000532078 DUOX2Q9NRD8 1548 aa23.87■■□□□ 1.41
DEPDC7-204ENST00000532078 SHANK2Q9UPX8 1470 aa23.87■■□□□ 1.41
DEPDC7-204ENST00000532078 MROH1Q8NDA8 1641 aa23.86■■□□□ 1.41
DEPDC7-204ENST00000532078 PTPN23Q9H3S7 1636 aa23.86■■□□□ 1.41
DEPDC7-204ENST00000532078 NEURL4Q96JN8 1562 aa23.84■■□□□ 1.41
DEPDC7-204ENST00000532078 UGGT1Q9NYU2 1555 aa23.83■■□□□ 1.41
DEPDC7-204ENST00000532078 SPATA31D1Q6ZQQ2 1576 aa23.82■■□□□ 1.4
DEPDC7-204ENST00000532078 KIF15Q9NS87 1388 aa23.81■■□□□ 1.4
DEPDC7-204ENST00000532078 CEP152O94986 1710 aa23.81■■□□□ 1.4
DEPDC7-204ENST00000532078 ABCC5O15440 1437 aa23.8■■□□□ 1.4
DEPDC7-204ENST00000532078 FGD6Q6ZV73 1430 aa23.8■■□□□ 1.4
DEPDC7-204ENST00000532078 THEMISQ8N1K5 641 aaPredicted RBP23.8■■□□□ 1.4
DEPDC7-204ENST00000532078 ERVK-7P63135 1459 aa23.8■■□□□ 1.4
DEPDC7-204ENST00000532078 PRDM15P57071 1507 aaPredicted RBP23.79■■□□□ 1.4
DEPDC7-204ENST00000532078 ERBINQ96RT1 1412 aa23.79■■□□□ 1.4
DEPDC7-204ENST00000532078 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.78■■□□□ 1.4
DEPDC7-204ENST00000532078 DEPDC5O75140 1603 aa23.78■■□□□ 1.4
DEPDC7-204ENST00000532078 DAPK1P53355 1430 aa23.77■■□□□ 1.4
DEPDC7-204ENST00000532078 ANKLE2Q86XL3 938 aa23.77■■□□□ 1.4
DEPDC7-204ENST00000532078 CPS1P31327 1500 aa23.74■■□□□ 1.39
DEPDC7-204ENST00000532078 MED14O60244 1454 aa23.74■■□□□ 1.39
DEPDC7-204ENST00000532078 UBAP1LF5GYI3 381 aa23.73■■□□□ 1.39
DEPDC7-204ENST00000532078 RRP7BPQ9NSQ0 103 aa23.72■■□□□ 1.39
DEPDC7-204ENST00000532078 NPHP4O75161 1426 aaPredicted RBP23.72■■□□□ 1.39
DEPDC7-204ENST00000532078 IQGAP1P46940 1657 aa23.71■■□□□ 1.39
DEPDC7-204ENST00000532078 ARHGAP31Q2M1Z3 1444 aa23.7■■□□□ 1.38
DEPDC7-204ENST00000532078 VWDEQ8N2E2 1590 aa23.69■■□□□ 1.38
DEPDC7-204ENST00000532078 ANKRD30AQ9BXX3 1397 aa23.69■■□□□ 1.38
DEPDC7-204ENST00000532078 DISP3Q9P2K9 1392 aa23.69■■□□□ 1.38
DEPDC7-204ENST00000532078 SPINK5Q9NQ38 1064 aaPredicted RBP23.69■■□□□ 1.38
DEPDC7-204ENST00000532078 UBR1Q8IWV7 1749 aa23.68■■□□□ 1.38
DEPDC7-204ENST00000532078 KANK1Q14678 1352 aa23.67■■□□□ 1.38
DEPDC7-204ENST00000532078 CAPN15O75808 1086 aa23.67■■□□□ 1.38
DEPDC7-204ENST00000532078 CFAP65Q6ZU64 1925 aaKnown RBP23.67■■□□□ 1.38
DEPDC7-204ENST00000532078 CHIC2Q9UKJ5 165 aa23.62■■□□□ 1.37
DEPDC7-204ENST00000532078 LMTK2Q8IWU2 1503 aa23.62■■□□□ 1.37
DEPDC7-204ENST00000532078 ADGRL2O95490 1459 aa23.62■■□□□ 1.37
DEPDC7-204ENST00000532078 SCAF11Q99590 1463 aaKnown RBP23.62■■□□□ 1.37
DEPDC7-204ENST00000532078 SLIT1O75093 1534 aa23.6■■□□□ 1.37
DEPDC7-204ENST00000532078 ARHGAP23Q9P227 1491 aa23.59■■□□□ 1.37
DEPDC7-204ENST00000532078 SYNMO15061 1565 aa23.58■■□□□ 1.37
DEPDC7-204ENST00000532078 PIK3C2BO00750 1634 aa23.58■■□□□ 1.36
DEPDC7-204ENST00000532078 TOM1O60784 492 aa23.57■■□□□ 1.36
DEPDC7-204ENST00000532078 EFCAB6Q5THR3 1501 aa23.56■■□□□ 1.36
DEPDC7-204ENST00000532078 KDM5AP29375 1690 aaKnown RBP23.56■■□□□ 1.36
DEPDC7-204ENST00000532078 FAM50AQ14320 339 aaKnown RBP23.55■■□□□ 1.36
DEPDC7-204ENST00000532078 STRCP1A6NGW2 1772 aa23.55■■□□□ 1.36
DEPDC7-204ENST00000532078 PIP4K2BP78356 416 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms